RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 NDUFAF4Q9P032 175 aa12.36□□□□□ -0.43
TRAF3-208ENST00000560371 CCDC187A0A096LP49 1063 aa12.36□□□□□ -0.43
TRAF3-208ENST00000560371 C4orf47A7E2U8 309 aa12.36□□□□□ -0.43
TRAF3-208ENST00000560371 P2RY10O00398 339 aa12.36□□□□□ -0.43
TRAF3-208ENST00000560371 ATP6V1G1O75348 118 aa12.36□□□□□ -0.43
TRAF3-208ENST00000560371 GPX2P18283 190 aa12.36□□□□□ -0.43
TRAF3-208ENST00000560371 CR2P20023 1033 aa12.36□□□□□ -0.43
TRAF3-208ENST00000560371 FGFBP1Q14512 234 aa12.36□□□□□ -0.43
TRAF3-208ENST00000560371 ARHGAP11BQ3KRB8 267 aa12.36□□□□□ -0.43
TRAF3-208ENST00000560371 STEAP3Q658P3 488 aa12.36□□□□□ -0.43
TRAF3-208ENST00000560371 SLC46A3Q7Z3Q1 461 aa12.36□□□□□ -0.43
TRAF3-208ENST00000560371 EMG1Q92979 244 aaKnown RBP12.36□□□□□ -0.43
TRAF3-208ENST00000560371 M0R082 166 aa12.36□□□□□ -0.43
TRAF3-208ENST00000560371 PIP5K1CO60331 668 aa12.36□□□□□ -0.43
TRAF3-208ENST00000560371 LGI1O95970 557 aa12.36□□□□□ -0.43
TRAF3-208ENST00000560371 APOC3P02656 99 aa12.36□□□□□ -0.43
TRAF3-208ENST00000560371 IGFBP1P08833 259 aaPredicted RBP12.36□□□□□ -0.43
TRAF3-208ENST00000560371 ALDH3B2P48448 385 aa12.36□□□□□ -0.43
TRAF3-208ENST00000560371 WNT16Q9UBV4 365 aa12.36□□□□□ -0.43
TRAF3-208ENST00000560371 OR6C65A6NJZ3 312 aa12.35□□□□□ -0.43
TRAF3-208ENST00000560371 AGFG1P52594 562 aaKnown RBP12.35□□□□□ -0.43
TRAF3-208ENST00000560371 RDH10Q8IZV5 341 aa12.35□□□□□ -0.43
TRAF3-208ENST00000560371 KCTD12Q96CX2 325 aaKnown RBP12.35□□□□□ -0.43
TRAF3-208ENST00000560371 MALSU1Q96EH3 234 aa12.35□□□□□ -0.43
TRAF3-208ENST00000560371 BSCL2Q96G97 398 aaPredicted RBP12.35□□□□□ -0.43
TRAF3-208ENST00000560371 SGPP1Q9BX95 441 aa12.35□□□□□ -0.43
TRAF3-208ENST00000560371 CRLF2Q9HC73 371 aa12.35□□□□□ -0.43
TRAF3-208ENST00000560371 SPINT2O43291 252 aa12.35□□□□□ -0.43
TRAF3-208ENST00000560371 RGS11O94810 467 aa12.35□□□□□ -0.43
TRAF3-208ENST00000560371 CDONQ4KMG0 1287 aa12.35□□□□□ -0.43
TRAF3-208ENST00000560371 C1orf210Q8IVY1 113 aa12.35□□□□□ -0.43
TRAF3-208ENST00000560371 C12orf45Q8N5I9 185 aaPredicted RBP12.35□□□□□ -0.43
TRAF3-208ENST00000560371 TMIGD2Q96BF3 282 aa12.35□□□□□ -0.43
TRAF3-208ENST00000560371 DCLRE1CQ96SD1 692 aaKnown RBP12.35□□□□□ -0.43
TRAF3-208ENST00000560371 UBQLN3Q9H347 655 aa12.35□□□□□ -0.43
TRAF3-208ENST00000560371 FKRPQ9H9S5 495 aa12.35□□□□□ -0.43
TRAF3-208ENST00000560371 KIF25Q9UIL4 384 aa12.35□□□□□ -0.43
TRAF3-208ENST00000560371 FOCADQ5VW36 1801 aa12.35□□□□□ -0.43
TRAF3-208ENST00000560371 SOCS6O14544 535 aa12.35□□□□□ -0.43
TRAF3-208ENST00000560371 CEACAM5P06731 702 aa12.35□□□□□ -0.43
TRAF3-208ENST00000560371 CTSLP07711 333 aa12.35□□□□□ -0.43
TRAF3-208ENST00000560371 CPT2P23786 658 aa12.35□□□□□ -0.43
TRAF3-208ENST00000560371 MPLP40238 635 aa12.35□□□□□ -0.43
TRAF3-208ENST00000560371 BTG2P78543 158 aa12.35□□□□□ -0.43
TRAF3-208ENST00000560371 PFN4Q8NHR9 129 aa12.35□□□□□ -0.43
TRAF3-208ENST00000560371 ABHD4Q8TB40 342 aa12.35□□□□□ -0.43
TRAF3-208ENST00000560371 ELMOD3Q96FG2 381 aa12.35□□□□□ -0.43
TRAF3-208ENST00000560371 TEX37Q96LM6 180 aa12.35□□□□□ -0.43
TRAF3-208ENST00000560371 C7orf50Q9BRJ6 194 aaKnown RBP12.35□□□□□ -0.43
TRAF3-208ENST00000560371 SCN4AP35499 1836 aa12.35□□□□□ -0.43
TRAF3-208ENST00000560371 BRWD3Q6RI45 1802 aa12.35□□□□□ -0.43
TRAF3-208ENST00000560371 CRYAAP02489 173 aa12.35□□□□□ -0.43
TRAF3-208ENST00000560371 FPR3P25089 353 aa12.35□□□□□ -0.43
TRAF3-208ENST00000560371 PPICP45877 212 aa12.35□□□□□ -0.43
TRAF3-208ENST00000560371 BCORP1Q8N888 145 aa12.35□□□□□ -0.43
TRAF3-208ENST00000560371 OR52A5Q9H2C5 316 aa12.35□□□□□ -0.43
TRAF3-208ENST00000560371 FGF17O60258 216 aa12.35□□□□□ -0.43
TRAF3-208ENST00000560371 GLCEO94923 617 aa12.35□□□□□ -0.43
TRAF3-208ENST00000560371 OLFM2O95897 454 aa12.35□□□□□ -0.43
TRAF3-208ENST00000560371 RPL27P61353 136 aaKnown RBP12.35□□□□□ -0.43
TRAF3-208ENST00000560371 CAMK2BQ13554 666 aa12.35□□□□□ -0.43
TRAF3-208ENST00000560371 DYRK1AQ13627 763 aa12.35□□□□□ -0.43
TRAF3-208ENST00000560371 ALKBH1Q13686 389 aaKnown RBP12.35□□□□□ -0.43
TRAF3-208ENST00000560371 LPCAT3Q6P1A2 487 aa12.35□□□□□ -0.43
TRAF3-208ENST00000560371 CAMKMTQ7Z624 323 aa12.35□□□□□ -0.43
TRAF3-208ENST00000560371 WDR5BQ86VZ2 330 aa12.35□□□□□ -0.43
TRAF3-208ENST00000560371 GAB3Q8WWW8 586 aa12.35□□□□□ -0.43
TRAF3-208ENST00000560371 OR51J1Q9H342 316 aa12.35□□□□□ -0.43
TRAF3-208ENST00000560371 IL21Q9HBE4 155 aa12.35□□□□□ -0.43
TRAF3-208ENST00000560371 NRIP3Q9NQ35 241 aa12.35□□□□□ -0.43
TRAF3-208ENST00000560371 MT-ND4P03905 459 aa12.35□□□□□ -0.43
TRAF3-208ENST00000560371 NFYBP25208 207 aa12.35□□□□□ -0.43
TRAF3-208ENST00000560371 SELENBP1Q13228 472 aa12.35□□□□□ -0.43
TRAF3-208ENST00000560371 OLIG3Q7RTU3 272 aa12.35□□□□□ -0.43
TRAF3-208ENST00000560371 CADM4Q8NFZ8 388 aa12.35□□□□□ -0.43
TRAF3-208ENST00000560371 RBMXL1Q96E39 390 aaKnown RBP12.35□□□□□ -0.43
TRAF3-208ENST00000560371 RNF170Q96K19 258 aa12.35□□□□□ -0.43
TRAF3-208ENST00000560371 TEX101Q9BY14 249 aa12.35□□□□□ -0.43
TRAF3-208ENST00000560371 OR52A1Q9UKL2 312 aa12.35□□□□□ -0.43
TRAF3-208ENST00000560371 HRH3Q9Y5N1 445 aa12.35□□□□□ -0.43
TRAF3-208ENST00000560371 ZNF701M0R085 212 aaPredicted RBP12.34□□□□□ -0.43
TRAF3-208ENST00000560371 DEGS1O15121 323 aa12.34□□□□□ -0.43
TRAF3-208ENST00000560371 CLDN12P56749 244 aa12.34□□□□□ -0.43
TRAF3-208ENST00000560371 RNF4P78317 190 aa12.34□□□□□ -0.43
TRAF3-208ENST00000560371 TSLPQ969D9 159 aa12.34□□□□□ -0.43
TRAF3-208ENST00000560371 ARL11Q969Q4 196 aa12.34□□□□□ -0.43
TRAF3-208ENST00000560371 CPNE5Q9HCH3 593 aa12.34□□□□□ -0.43
TRAF3-208ENST00000560371 COA3Q9Y2R0 106 aaPredicted RBP12.34□□□□□ -0.43
TRAF3-208ENST00000560371 A8MXE2 369 aa12.34□□□□□ -0.43
TRAF3-208ENST00000560371 ADAM23O75077 832 aa12.34□□□□□ -0.43
TRAF3-208ENST00000560371 SPEM2Q0P670 501 aa12.34□□□□□ -0.43
TRAF3-208ENST00000560371 Q499Y3 187 aa12.34□□□□□ -0.43
TRAF3-208ENST00000560371 SLC35D3Q5M8T2 416 aa12.34□□□□□ -0.43
TRAF3-208ENST00000560371 OR5AS1Q8N127 324 aa12.34□□□□□ -0.43
TRAF3-208ENST00000560371 FAM53CQ9NYF3 392 aa12.34□□□□□ -0.43
TRAF3-208ENST00000560371 ZNF891A8MT65 544 aaPredicted RBP12.34□□□□□ -0.43
TRAF3-208ENST00000560371 CNIH1O95406 144 aa12.34□□□□□ -0.43
TRAF3-208ENST00000560371 DLX5P56178 289 aa12.34□□□□□ -0.43
TRAF3-208ENST00000560371 C16orf52Q8NHV5 167 aa12.34□□□□□ -0.43
TRAF3-208ENST00000560371 PDCD1LG2Q9BQ51 273 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 114.2 ms