RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 CXorf58Q96LI9 332 aa12.82□□□□□ -0.36
CSPG4P12-202ENST00000559989 CIB3Q96Q77 187 aaPredicted RBP12.82□□□□□ -0.36
CSPG4P12-202ENST00000559989 BCO1Q9HAY6 547 aa12.82□□□□□ -0.36
CSPG4P12-202ENST00000559989 SIX2Q9NPC8 291 aa12.82□□□□□ -0.36
CSPG4P12-202ENST00000559989 PADI1Q9ULC6 663 aa12.82□□□□□ -0.36
CSPG4P12-202ENST00000559989 CA14Q9ULX7 337 aa12.82□□□□□ -0.36
CSPG4P12-202ENST00000559989 MBD5Q9P267 1494 aa12.82□□□□□ -0.36
CSPG4P12-202ENST00000559989 PMCHP20382 165 aa12.82□□□□□ -0.36
CSPG4P12-202ENST00000559989 FGF7P21781 194 aa12.82□□□□□ -0.36
CSPG4P12-202ENST00000559989 UQCRFS1P47985 274 aa12.82□□□□□ -0.36
CSPG4P12-202ENST00000559989 KIAA1024LP59773 190 aa12.82□□□□□ -0.36
CSPG4P12-202ENST00000559989 MARCH8Q5T0T0 291 aa12.82□□□□□ -0.36
CSPG4P12-202ENST00000559989 DPPA4Q7L190 304 aa12.82□□□□□ -0.36
CSPG4P12-202ENST00000559989 NRARPQ7Z6K4 114 aa12.82□□□□□ -0.36
CSPG4P12-202ENST00000559989 OR1J1Q8NGS3 322 aa12.82□□□□□ -0.36
CSPG4P12-202ENST00000559989 SYT17Q9BSW7 474 aa12.82□□□□□ -0.36
CSPG4P12-202ENST00000559989 ST8SIA3O43173 380 aa12.82□□□□□ -0.36
CSPG4P12-202ENST00000559989 GPR32O75388 356 aa12.82□□□□□ -0.36
CSPG4P12-202ENST00000559989 SEMA4FO95754 770 aa12.82□□□□□ -0.36
CSPG4P12-202ENST00000559989 GIPP09681 153 aaPredicted RBP12.82□□□□□ -0.36
CSPG4P12-202ENST00000559989 C15orf52Q6ZUT6 534 aaKnown RBP12.82□□□□□ -0.36
CSPG4P12-202ENST00000559989 ZNF516Q92618 1163 aa12.82□□□□□ -0.36
CSPG4P12-202ENST00000559989 SLC46A1Q96NT5 459 aa12.82□□□□□ -0.36
CSPG4P12-202ENST00000559989 ABHD16AO95870 558 aa12.82□□□□□ -0.36
CSPG4P12-202ENST00000559989 NPY4RP50391 375 aa12.82□□□□□ -0.36
CSPG4P12-202ENST00000559989 GNB2P62879 340 aa12.82□□□□□ -0.36
CSPG4P12-202ENST00000559989 HBA1P69905 142 aa12.82□□□□□ -0.36
CSPG4P12-202ENST00000559989 CEACAM7Q14002 265 aa12.82□□□□□ -0.36
CSPG4P12-202ENST00000559989 C9orf135Q5VTT2 229 aa12.82□□□□□ -0.36
CSPG4P12-202ENST00000559989 FDX2Q6P4F2 183 aa12.82□□□□□ -0.36
CSPG4P12-202ENST00000559989 ST8SIA4Q92187 359 aa12.82□□□□□ -0.36
CSPG4P12-202ENST00000559989 GALR2O43603 387 aaPredicted RBP12.81□□□□□ -0.36
CSPG4P12-202ENST00000559989 SPANXN5Q5MJ07 72 aa12.81□□□□□ -0.36
CSPG4P12-202ENST00000559989 TMEM268Q5VZI3 342 aa12.81□□□□□ -0.36
CSPG4P12-202ENST00000559989 CLDN22Q8N7P3 220 aa12.81□□□□□ -0.36
CSPG4P12-202ENST00000559989 SLC39A7Q92504 469 aa12.81□□□□□ -0.36
CSPG4P12-202ENST00000559989 KHSRPQ92945 711 aaKnown RBP eCLIP12.81□□□□□ -0.36
CSPG4P12-202ENST00000559989 TAAR6Q96RI8 345 aa12.81□□□□□ -0.36
CSPG4P12-202ENST00000559989 ZNF785A8K8V0 405 aa12.81□□□□□ -0.36
CSPG4P12-202ENST00000559989 GRPP07492 148 aa12.81□□□□□ -0.36
CSPG4P12-202ENST00000559989 RPA2P15927 270 aa12.81□□□□□ -0.36
CSPG4P12-202ENST00000559989 OR1D4P47884 311 aa12.81□□□□□ -0.36
CSPG4P12-202ENST00000559989 KIR2DS3Q14952 304 aa12.81□□□□□ -0.36
CSPG4P12-202ENST00000559989 DTD1Q8TEA8 209 aa12.81□□□□□ -0.36
CSPG4P12-202ENST00000559989 TMEM230Q96A57 120 aa12.81□□□□□ -0.36
CSPG4P12-202ENST00000559989 SEH1LQ96EE3 360 aa12.81□□□□□ -0.36
CSPG4P12-202ENST00000559989 KIR2DS1A0A191URI9 304 aa12.81□□□□□ -0.36
CSPG4P12-202ENST00000559989 FAM183AA6NL82 134 aa12.81□□□□□ -0.36
CSPG4P12-202ENST00000559989 CRISP2P16562 243 aa12.81□□□□□ -0.36
CSPG4P12-202ENST00000559989 COX5AP20674 150 aa12.81□□□□□ -0.36
CSPG4P12-202ENST00000559989 KIR2DS4P43632 304 aa12.81□□□□□ -0.36
CSPG4P12-202ENST00000559989 KIR2DS1Q14954 304 aa12.81□□□□□ -0.36
CSPG4P12-202ENST00000559989 DTWD1Q8N5C7 304 aa12.81□□□□□ -0.36
CSPG4P12-202ENST00000559989 PARP12Q9H0J9 701 aaKnown RBP12.81□□□□□ -0.36
CSPG4P12-202ENST00000559989 EPHX3Q9H6B9 360 aa12.81□□□□□ -0.36
CSPG4P12-202ENST00000559989 DMAC2Q9NW81 257 aa12.81□□□□□ -0.36
CSPG4P12-202ENST00000559989 NDUFB7P17568 137 aa12.81□□□□□ -0.36
CSPG4P12-202ENST00000559989 ELAVL4P26378 380 aaKnown RBP12.81□□□□□ -0.36
CSPG4P12-202ENST00000559989 PTBP1P26599 531 aaKnown RBP eCLIP12.81□□□□□ -0.36
CSPG4P12-202ENST00000559989 BCL6P41182 706 aa12.81□□□□□ -0.36
CSPG4P12-202ENST00000559989 MFAP5Q13361 173 aa12.81□□□□□ -0.36
CSPG4P12-202ENST00000559989 OR8G1Q15617 311 aa12.81□□□□□ -0.36
CSPG4P12-202ENST00000559989 IER5LQ5T953 404 aa12.81□□□□□ -0.36
CSPG4P12-202ENST00000559989 PLXDC2Q6UX71 529 aa12.81□□□□□ -0.36
CSPG4P12-202ENST00000559989 ACOT7LQ6ZUV0 252 aa12.81□□□□□ -0.36
CSPG4P12-202ENST00000559989 TMEM123Q8N131 208 aa12.81□□□□□ -0.36
CSPG4P12-202ENST00000559989 SCAMP4Q969E2 229 aa12.81□□□□□ -0.36
CSPG4P12-202ENST00000559989 TIMM29Q9BSF4 260 aa12.81□□□□□ -0.36
CSPG4P12-202ENST00000559989 SLC17A9Q9BYT1 436 aa12.81□□□□□ -0.36
CSPG4P12-202ENST00000559989 AGPAT4Q9NRZ5 378 aa12.81□□□□□ -0.36
CSPG4P12-202ENST00000559989 SIRPAP78324 504 aa12.81□□□□□ -0.36
CSPG4P12-202ENST00000559989 ALKBH1Q13686 389 aaKnown RBP12.81□□□□□ -0.36
CSPG4P12-202ENST00000559989 B3GNT9Q6UX72 402 aa12.81□□□□□ -0.36
CSPG4P12-202ENST00000559989 GSTO2Q9H4Y5 243 aa12.81□□□□□ -0.36
CSPG4P12-202ENST00000559989 DLL4Q9NR61 685 aa12.81□□□□□ -0.36
CSPG4P12-202ENST00000559989 M0QYG6 137 aa12.81□□□□□ -0.36
CSPG4P12-202ENST00000559989 SH2D1BO14796 132 aa12.81□□□□□ -0.36
CSPG4P12-202ENST00000559989 GOSR1O95249 250 aa12.81□□□□□ -0.36
CSPG4P12-202ENST00000559989 ZNF528Q3MIS6 628 aa12.81□□□□□ -0.36
CSPG4P12-202ENST00000559989 GTDC1Q4AE62 458 aa12.81□□□□□ -0.36
CSPG4P12-202ENST00000559989 DRAM2Q6UX65 266 aa12.81□□□□□ -0.36
CSPG4P12-202ENST00000559989 ABHD4Q8TB40 342 aa12.81□□□□□ -0.36
CSPG4P12-202ENST00000559989 KCNE4Q8WWG9 221 aa12.81□□□□□ -0.36
CSPG4P12-202ENST00000559989 SLC7A6Q92536 515 aa12.81□□□□□ -0.36
CSPG4P12-202ENST00000559989 SLC35A4Q96G79 324 aa12.81□□□□□ -0.36
CSPG4P12-202ENST00000559989 ADOQ96SZ5 270 aa12.81□□□□□ -0.36
CSPG4P12-202ENST00000559989 C5AR2Q9P296 337 aa12.81□□□□□ -0.36
CSPG4P12-202ENST00000559989 NDRG3Q9UGV2 375 aa12.81□□□□□ -0.36
CSPG4P12-202ENST00000559989 NSG2Q9Y328 171 aa12.81□□□□□ -0.36
CSPG4P12-202ENST00000559989 LDB3O75112 727 aa12.8□□□□□ -0.36
CSPG4P12-202ENST00000559989 FGF4P08620 206 aa12.8□□□□□ -0.36
CSPG4P12-202ENST00000559989 RPL24P83731 157 aaKnown RBP12.8□□□□□ -0.36
CSPG4P12-202ENST00000559989 Q3ZCU0 254 aa12.8□□□□□ -0.36
CSPG4P12-202ENST00000559989 RNASEKQ6P5S7 137 aaKnown RBP12.8□□□□□ -0.36
CSPG4P12-202ENST00000559989 CORO6Q6QEF8 472 aa12.8□□□□□ -0.36
CSPG4P12-202ENST00000559989 BCL2L2Q92843 193 aaPredicted RBP12.8□□□□□ -0.36
CSPG4P12-202ENST00000559989 SOD2P04179 222 aa12.8□□□□□ -0.36
CSPG4P12-202ENST00000559989 RAD52P43351 418 aa12.8□□□□□ -0.36
CSPG4P12-202ENST00000559989 SLC6A11P48066 632 aa12.8□□□□□ -0.36
CSPG4P12-202ENST00000559989 BTG1P62324 171 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms