RNA–Protein interactions for RNA: ENST00000559961.1

SNX1-209, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-209ENST00000559961 TFP02787 698 aa10.82□□□□□ -0.68
SNX1-209ENST00000559961 F13BP05160 661 aa10.82□□□□□ -0.68
SNX1-209ENST00000559961 PATE4P0C8F1 98 aa10.82□□□□□ -0.68
SNX1-209ENST00000559961 FAM157BP0CG42 384 aa10.82□□□□□ -0.68
SNX1-209ENST00000559961 PGA4P0DJD7 388 aa10.82□□□□□ -0.68
SNX1-209ENST00000559961 PGA3P0DJD8 388 aa10.82□□□□□ -0.68
SNX1-209ENST00000559961 ACADSP16219 412 aa10.82□□□□□ -0.68
SNX1-209ENST00000559961 GCH1P30793 250 aa10.82□□□□□ -0.68
SNX1-209ENST00000559961 MRPS11P82912 194 aaKnown RBP10.82□□□□□ -0.68
SNX1-209ENST00000559961 CD47Q08722 323 aa10.82□□□□□ -0.68
SNX1-209ENST00000559961 ST3GAL3Q11203 375 aa10.82□□□□□ -0.68
SNX1-209ENST00000559961 CCNIQ14094 377 aa10.82□□□□□ -0.68
SNX1-209ENST00000559961 LRRC23Q53EV4 343 aaPredicted RBP10.82□□□□□ -0.68
SNX1-209ENST00000559961 LRFN4Q6PJG9 635 aa10.82□□□□□ -0.68
SNX1-209ENST00000559961 ARL9Q6T311 187 aa10.82□□□□□ -0.68
SNX1-209ENST00000559961 IL17RELQ6ZVW7 336 aa10.82□□□□□ -0.68
SNX1-209ENST00000559961 RRM2BQ7LG56 351 aa10.82□□□□□ -0.68
SNX1-209ENST00000559961 C1orf174Q8IYL3 243 aa10.82□□□□□ -0.68
SNX1-209ENST00000559961 LRRC18Q8N456 261 aa10.82□□□□□ -0.68
SNX1-209ENST00000559961 CPEB3Q8NE35 698 aaKnown RBP10.82□□□□□ -0.68
SNX1-209ENST00000559961 ZNF519Q8TB69 540 aa10.82□□□□□ -0.68
SNX1-209ENST00000559961 MCHR2Q969V1 340 aa10.82□□□□□ -0.68
SNX1-209ENST00000559961 SIAEQ9HAT2 523 aa10.82□□□□□ -0.68
SNX1-209ENST00000559961 HINT3Q9NQE9 182 aaKnown RBP10.82□□□□□ -0.68
SNX1-209ENST00000559961 FZR1Q9UM11 496 aa10.82□□□□□ -0.68
SNX1-209ENST00000559961 LOC100653049A0A140TA62 436 aa10.81□□□□□ -0.68
SNX1-209ENST00000559961 PLSCR5A0PG75 271 aa10.81□□□□□ -0.68
SNX1-209ENST00000559961 LYNX1G3V0Z9 82 aa10.81□□□□□ -0.68
SNX1-209ENST00000559961 TCF21O43680 179 aa10.81□□□□□ -0.68
SNX1-209ENST00000559961 LILRA1O75019 489 aa10.81□□□□□ -0.68
SNX1-209ENST00000559961 KRT34O76011 436 aa10.81□□□□□ -0.68
SNX1-209ENST00000559961 IGF2P01344 180 aa10.81□□□□□ -0.68
SNX1-209ENST00000559961 LYNX1P0DP58 116 aa10.81□□□□□ -0.68
SNX1-209ENST00000559961 SAGP10523 405 aaPredicted RBP10.81□□□□□ -0.68
SNX1-209ENST00000559961 NAT2P11245 290 aa10.81□□□□□ -0.68
SNX1-209ENST00000559961 AQP2P41181 271 aa10.81□□□□□ -0.68
SNX1-209ENST00000559961 GDI2P50395 445 aaKnown RBP10.81□□□□□ -0.68
SNX1-209ENST00000559961 DVL1P1P54792 670 aaPredicted RBP10.81□□□□□ -0.68
SNX1-209ENST00000559961 UCP2P55851 309 aa10.81□□□□□ -0.68
SNX1-209ENST00000559961 PCBD1P61457 104 aa10.81□□□□□ -0.68
SNX1-209ENST00000559961 MYBPC1Q00872 1141 aa10.81□□□□□ -0.68
SNX1-209ENST00000559961 RPL18Q07020 188 aaKnown RBP10.81□□□□□ -0.68
SNX1-209ENST00000559961 RIN1Q13671 783 aa10.81□□□□□ -0.68
SNX1-209ENST00000559961 SGCAQ16586 387 aa10.81□□□□□ -0.68
SNX1-209ENST00000559961 FXNQ16595 210 aa10.81□□□□□ -0.68
SNX1-209ENST00000559961 HSP90B2PQ58FF3 399 aa10.81□□□□□ -0.68
SNX1-209ENST00000559961 RABL3Q5HYI8 236 aa10.81□□□□□ -0.68
SNX1-209ENST00000559961 NHLRC1Q6VVB1 395 aa10.81□□□□□ -0.68
SNX1-209ENST00000559961 WDR88Q6ZMY6 472 aa10.81□□□□□ -0.68
SNX1-209ENST00000559961 TREML1Q86YW5 311 aa10.81□□□□□ -0.68
SNX1-209ENST00000559961 RFLNBQ8N5W9 214 aa10.81□□□□□ -0.68
SNX1-209ENST00000559961 NOXO1Q8NFA2 376 aa10.81□□□□□ -0.68
SNX1-209ENST00000559961 OR2T12Q8NG77 320 aa10.81□□□□□ -0.68
SNX1-209ENST00000559961 C10orf82Q8WW14 230 aa10.81□□□□□ -0.68
SNX1-209ENST00000559961 TIMD4Q96H15 378 aa10.81□□□□□ -0.68
SNX1-209ENST00000559961 FNDC11Q9BVV2 318 aa10.81□□□□□ -0.68
SNX1-209ENST00000559961 OR51B6Q9H340 312 aa10.81□□□□□ -0.68
SNX1-209ENST00000559961 METRNQ9UJH8 293 aa10.81□□□□□ -0.68
SNX1-209ENST00000559961 PLCE1Q9P212 2302 aa10.81□□□□□ -0.68
SNX1-209ENST00000559961 A6NIZ1 184 aa10.8□□□□□ -0.68
SNX1-209ENST00000559961 SNAP29O95721 258 aa10.8□□□□□ -0.68
SNX1-209ENST00000559961 OR1E2P47887 323 aa10.8□□□□□ -0.68
SNX1-209ENST00000559961 ARHGDIAP52565 204 aa10.8□□□□□ -0.68
SNX1-209ENST00000559961 SEC24CP53992 1094 aa10.8□□□□□ -0.68
SNX1-209ENST00000559961 UGT2B15P54855 530 aa10.8□□□□□ -0.68
SNX1-209ENST00000559961 RAP1BP61224 184 aa10.8□□□□□ -0.68
SNX1-209ENST00000559961 RAP1AP62834 184 aa10.8□□□□□ -0.68
SNX1-209ENST00000559961 KLF10Q13118 480 aa10.8□□□□□ -0.68
SNX1-209ENST00000559961 PIN1Q13526 163 aaPredicted RBP10.8□□□□□ -0.68
SNX1-209ENST00000559961 MAD2L1BPQ15013 274 aaPredicted RBP10.8□□□□□ -0.68
SNX1-209ENST00000559961 ALKBH6Q3KRA9 238 aa10.8□□□□□ -0.68
SNX1-209ENST00000559961 ZNF718Q3SXZ3 478 aa10.8□□□□□ -0.68
SNX1-209ENST00000559961 CYBRD1Q53TN4 286 aa10.8□□□□□ -0.68
SNX1-209ENST00000559961 ALG10Q5BKT4 473 aa10.8□□□□□ -0.68
SNX1-209ENST00000559961 FAM209AQ5JX71 171 aa10.8□□□□□ -0.68
SNX1-209ENST00000559961 THEM4Q5T1C6 240 aa10.8□□□□□ -0.68
SNX1-209ENST00000559961 FAM205BPQ63HN1 556 aa10.8□□□□□ -0.68
SNX1-209ENST00000559961 ARPINQ7Z6K5 226 aa10.8□□□□□ -0.68
SNX1-209ENST00000559961 LRP11Q86VZ4 500 aa10.8□□□□□ -0.68
SNX1-209ENST00000559961 CYP4Z1Q86W10 505 aa10.8□□□□□ -0.68
SNX1-209ENST00000559961 NKAIN4Q8IVV8 208 aa10.8□□□□□ -0.68
SNX1-209ENST00000559961 OR4D11Q8NGI4 311 aa10.8□□□□□ -0.68
SNX1-209ENST00000559961 OR1J1Q8NGS3 322 aa10.8□□□□□ -0.68
SNX1-209ENST00000559961 OR51F2Q8NH61 342 aa10.8□□□□□ -0.68
SNX1-209ENST00000559961 TMEM255BQ8WV15 326 aa10.8□□□□□ -0.68
SNX1-209ENST00000559961 ASB10Q8WXI3 467 aa10.8□□□□□ -0.68
SNX1-209ENST00000559961 ZNF347Q96SE7 839 aa10.8□□□□□ -0.68
SNX1-209ENST00000559961 ZNF426Q9BUY5 554 aa10.8□□□□□ -0.68
SNX1-209ENST00000559961 OCEL1Q9H607 264 aa10.8□□□□□ -0.68
SNX1-209ENST00000559961 NARFLQ9H6Q4 476 aa10.8□□□□□ -0.68
SNX1-209ENST00000559961 SMURF2Q9HAU4 748 aa10.8□□□□□ -0.68
SNX1-209ENST00000559961 ZNF224Q9NZL3 707 aa10.8□□□□□ -0.68
SNX1-209ENST00000559961 CAPN7Q9Y6W3 813 aa10.8□□□□□ -0.68
SNX1-209ENST00000559961 SONP18583 2426 aaKnown RBP10.8□□□□□ -0.68
SNX1-209ENST00000559961 CR1P17927 2039 aa10.8□□□□□ -0.68
SNX1-209ENST00000559961 ZANQ9Y493 2812 aa10.8□□□□□ -0.68
SNX1-209ENST00000559961 ELOVL7A1L3X0 281 aa10.79□□□□□ -0.68
SNX1-209ENST00000559961 C17orf100A8MU93 164 aa10.79□□□□□ -0.68
SNX1-209ENST00000559961 FAM220BPB1ANY3 271 aa10.79□□□□□ -0.68
SNX1-209ENST00000559961 FBP2O00757 339 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms