RNA–Protein interactions for RNA: ENST00000559152.5

CLPX-204, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 2,228 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-204ENST00000559152 TSPAN10Q9H1Z9 355 aaPredicted RBP10.15□□□□□ -0.78
CLPX-204ENST00000559152 DPAGT1Q9H3H5 408 aa10.15□□□□□ -0.78
CLPX-204ENST00000559152 PTGES2Q9H7Z7 377 aa10.15□□□□□ -0.78
CLPX-204ENST00000559152 DDX28Q9NUL7 540 aaKnown RBP10.15□□□□□ -0.78
CLPX-204ENST00000559152 VDAC3Q9Y277 283 aa10.15□□□□□ -0.78
CLPX-204ENST00000559152 CACNA1EQ15878 2313 aa10.15□□□□□ -0.79
CLPX-204ENST00000559152 ARID1BQ8NFD5 2236 aaPredicted RBP10.15□□□□□ -0.79
CLPX-204ENST00000559152 ASXL3Q9C0F0 2248 aa10.15□□□□□ -0.79
CLPX-204ENST00000559152 SEC16AO15027 2179 aa10.14□□□□□ -0.79
CLPX-204ENST00000559152 TRBV5-7A0A0A0MS05 114 aa10.14□□□□□ -0.79
CLPX-204ENST00000559152 A0A1W2PNV4 684 aa10.14□□□□□ -0.79
CLPX-204ENST00000559152 C2orf72A6NCS6 295 aa10.14□□□□□ -0.79
CLPX-204ENST00000559152 LIPT2A6NK58 231 aa10.14□□□□□ -0.79
CLPX-204ENST00000559152 INMT-MINDY4F8WBC2 141 aa10.14□□□□□ -0.79
CLPX-204ENST00000559152 WISP1O95388 367 aa10.14□□□□□ -0.79
CLPX-204ENST00000559152 CD63P08962 238 aa10.14□□□□□ -0.79
CLPX-204ENST00000559152 CTLA4P16410 223 aa10.14□□□□□ -0.79
CLPX-204ENST00000559152 ADH6P28332 368 aa10.14□□□□□ -0.79
CLPX-204ENST00000559152 EIF1P41567 113 aaKnown RBP10.14□□□□□ -0.79
CLPX-204ENST00000559152 RIDAP52758 137 aaKnown RBP10.14□□□□□ -0.79
CLPX-204ENST00000559152 MC2RQ01718 297 aa10.14□□□□□ -0.79
CLPX-204ENST00000559152 ZFP36L1Q07352 338 aaKnown RBP10.14□□□□□ -0.79
CLPX-204ENST00000559152 TRIM61Q5EBN2 209 aa10.14□□□□□ -0.79
CLPX-204ENST00000559152 SLC22A10Q63ZE4 541 aa10.14□□□□□ -0.79
CLPX-204ENST00000559152 ARSKQ6UWY0 536 aa10.14□□□□□ -0.79
CLPX-204ENST00000559152 KRT74Q7RTS7 529 aa10.14□□□□□ -0.79
CLPX-204ENST00000559152 HDDC2Q7Z4H3 204 aa10.14□□□□□ -0.79
CLPX-204ENST00000559152 DND1Q8IYX4 353 aaKnown RBP10.14□□□□□ -0.79
CLPX-204ENST00000559152 ADPRHL1Q8NDY3 354 aa10.14□□□□□ -0.79
CLPX-204ENST00000559152 PMEPA1Q969W9 287 aa10.14□□□□□ -0.79
CLPX-204ENST00000559152 C8orf44Q96CB5 159 aa10.14□□□□□ -0.79
CLPX-204ENST00000559152 ST6GAL2Q96JF0 529 aa10.14□□□□□ -0.79
CLPX-204ENST00000559152 ZFP3Q96NJ6 502 aa10.14□□□□□ -0.79
CLPX-204ENST00000559152 SLC25A18Q9H1K4 315 aa10.14□□□□□ -0.79
CLPX-204ENST00000559152 MRPS7Q9Y2R9 242 aaKnown RBP10.14□□□□□ -0.79
CLPX-204ENST00000559152 RP1P56715 2156 aa10.14□□□□□ -0.79
CLPX-204ENST00000559152 TMEM221A6NGB7 291 aa10.14□□□□□ -0.79
CLPX-204ENST00000559152 ANXA2P2A6NMY6 339 aa10.14□□□□□ -0.79
CLPX-204ENST00000559152 KHDRBS3O75525 346 aaKnown RBP10.14□□□□□ -0.79
CLPX-204ENST00000559152 AQP8O94778 261 aa10.14□□□□□ -0.79
CLPX-204ENST00000559152 ECDO95905 644 aaPredicted RBP10.14□□□□□ -0.79
CLPX-204ENST00000559152 DHFRP00374 187 aa10.14□□□□□ -0.79
CLPX-204ENST00000559152 PDGFBP01127 241 aaPredicted RBP10.14□□□□□ -0.79
CLPX-204ENST00000559152 ANXA2P07355 339 aaKnown RBP10.14□□□□□ -0.79
CLPX-204ENST00000559152 IFNGR1P15260 489 aa10.14□□□□□ -0.79
CLPX-204ENST00000559152 DPP4P27487 766 aa10.14□□□□□ -0.79
CLPX-204ENST00000559152 HSF1Q00613 529 aa10.14□□□□□ -0.79
CLPX-204ENST00000559152 DYRK1AQ13627 763 aa10.14□□□□□ -0.79
CLPX-204ENST00000559152 EIF2B1Q14232 305 aaKnown RBP10.14□□□□□ -0.79
CLPX-204ENST00000559152 BTBD16Q32M84 506 aa10.14□□□□□ -0.79
CLPX-204ENST00000559152 PLPPR5Q32ZL2 321 aa10.14□□□□□ -0.79
CLPX-204ENST00000559152 HES5Q5TA89 166 aa10.14□□□□□ -0.79
CLPX-204ENST00000559152 TIGD3Q6B0B8 471 aa10.14□□□□□ -0.79
CLPX-204ENST00000559152 LCN10Q6JVE6 187 aa10.14□□□□□ -0.79
CLPX-204ENST00000559152 DEGS2Q6QHC5 323 aa10.14□□□□□ -0.79
CLPX-204ENST00000559152 SLC35D2Q76EJ3 337 aa10.14□□□□□ -0.79
CLPX-204ENST00000559152 BMPERQ8N8U9 685 aa10.14□□□□□ -0.79
CLPX-204ENST00000559152 OR10G3Q8NGC4 313 aa10.14□□□□□ -0.79
CLPX-204ENST00000559152 SLC25A43Q8WUT9 341 aaPredicted RBP10.14□□□□□ -0.79
CLPX-204ENST00000559152 SMIM4Q8WVI0 70 aa10.14□□□□□ -0.79
CLPX-204ENST00000559152 MR1Q95460 341 aa10.14□□□□□ -0.79
CLPX-204ENST00000559152 YIPF5Q969M3 257 aa10.14□□□□□ -0.79
CLPX-204ENST00000559152 TMEM106AQ96A25 262 aa10.14□□□□□ -0.79
CLPX-204ENST00000559152 ZNF486Q96H40 463 aaPredicted RBP10.14□□□□□ -0.79
CLPX-204ENST00000559152 ARL5BQ96KC2 179 aa10.14□□□□□ -0.79
CLPX-204ENST00000559152 RASL10BQ96S79 203 aa10.14□□□□□ -0.79
CLPX-204ENST00000559152 SMAD5Q99717 465 aaKnown RBP10.14□□□□□ -0.79
CLPX-204ENST00000559152 MESP1Q9BRJ9 268 aa10.14□□□□□ -0.79
CLPX-204ENST00000559152 LIN7BQ9HAP6 207 aa10.14□□□□□ -0.79
CLPX-204ENST00000559152 ZNF275Q9NSD4 429 aaPredicted RBP10.14□□□□□ -0.79
CLPX-204ENST00000559152 MRPL22Q9NWU5 206 aaKnown RBP10.14□□□□□ -0.79
CLPX-204ENST00000559152 PISDQ9UG56 409 aa10.14□□□□□ -0.79
CLPX-204ENST00000559152 CLEC4AQ9UMR7 237 aa10.14□□□□□ -0.79
CLPX-204ENST00000559152 RPH3AQ9Y2J0 694 aaPredicted RBP10.14□□□□□ -0.79
CLPX-204ENST00000559152 B3GALT1Q9Y5Z6 326 aa10.14□□□□□ -0.79
CLPX-204ENST00000559152 TNRC6BQ9UPQ9 1833 aaKnown RBP10.14□□□□□ -0.79
CLPX-204ENST00000559152 SDK1Q7Z5N4 2213 aa10.13□□□□□ -0.79
CLPX-204ENST00000559152 A0A1B0GVC2 190 aa10.13□□□□□ -0.79
CLPX-204ENST00000559152 TRABD2BA6NFA1 517 aa10.13□□□□□ -0.79
CLPX-204ENST00000559152 A6NIN4 97 aa10.13□□□□□ -0.79
CLPX-204ENST00000559152 LDOC1O95751 146 aaPredicted RBP10.13□□□□□ -0.79
CLPX-204ENST00000559152 HRGP04196 525 aa10.13□□□□□ -0.79
CLPX-204ENST00000559152 GP1BAP07359 652 aa10.13□□□□□ -0.79
CLPX-204ENST00000559152 CFPP27918 469 aa10.13□□□□□ -0.79
CLPX-204ENST00000559152 PTGDSP41222 190 aa10.13□□□□□ -0.79
CLPX-204ENST00000559152 SOX2P48431 317 aa10.13□□□□□ -0.79
CLPX-204ENST00000559152 ART1P52961 327 aa10.13□□□□□ -0.79
CLPX-204ENST00000559152 AP3S2P59780 193 aa10.13□□□□□ -0.79
CLPX-204ENST00000559152 MELKQ14680 651 aa10.13□□□□□ -0.79
CLPX-204ENST00000559152 PCOLCEQ15113 449 aa10.13□□□□□ -0.79
CLPX-204ENST00000559152 SLC36A2Q495M3 483 aa10.13□□□□□ -0.79
CLPX-204ENST00000559152 PLA1AQ53H76 456 aa10.13□□□□□ -0.79
CLPX-204ENST00000559152 WDR38Q5JTN6 314 aa10.13□□□□□ -0.79
CLPX-204ENST00000559152 C3orf33Q6P1S2 294 aa10.13□□□□□ -0.79
CLPX-204ENST00000559152 TMEM81Q6P7N7 255 aa10.13□□□□□ -0.79
CLPX-204ENST00000559152 FAM199XQ6PEV8 388 aaPredicted RBP10.13□□□□□ -0.79
CLPX-204ENST00000559152 OPN5Q6U736 354 aa10.13□□□□□ -0.79
CLPX-204ENST00000559152 CDH24Q86UP0 819 aa10.13□□□□□ -0.79
CLPX-204ENST00000559152 ZNF227Q86WZ6 799 aa10.13□□□□□ -0.79
CLPX-204ENST00000559152 MAML2Q8IZL2 1156 aaPredicted RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms