RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 ZBTB25P24278 435 aa1.72□□□□□ -2.13
GABPB1-209ENST00000559100 MT3P25713 68 aa1.72□□□□□ -2.13
GABPB1-209ENST00000559100 U2AF2P26368 475 aaKnown RBP eCLIP1.72□□□□□ -2.13
GABPB1-209ENST00000559100 AK4P27144 223 aaPredicted RBP1.72□□□□□ -2.13
GABPB1-209ENST00000559100 CD82P27701 267 aa1.72□□□□□ -2.13
GABPB1-209ENST00000559100 BTCP35070 178 aa1.72□□□□□ -2.13
GABPB1-209ENST00000559100 LONP1P36776 959 aaKnown RBP1.72□□□□□ -2.13
GABPB1-209ENST00000559100 SLC26A3P40879 764 aa1.72□□□□□ -2.13
GABPB1-209ENST00000559100 GPR1P46091 355 aa1.72□□□□□ -2.13
GABPB1-209ENST00000559100 NPBWR2P48146 333 aa1.72□□□□□ -2.13
GABPB1-209ENST00000559100 RAB7AP51149 207 aa1.72□□□□□ -2.13
GABPB1-209ENST00000559100 CRISP1P54107 249 aa1.72□□□□□ -2.13
GABPB1-209ENST00000559100 UBE2MP61081 183 aaKnown RBP1.72□□□□□ -2.13
GABPB1-209ENST00000559100 STXBP1P61764 594 aaKnown RBP1.72□□□□□ -2.13
GABPB1-209ENST00000559100 NUTF2P61970 127 aaKnown RBP1.72□□□□□ -2.13
GABPB1-209ENST00000559100 ZNF33AQ06730 810 aa1.72□□□□□ -2.13
GABPB1-209ENST00000559100 TRAM2Q15035 370 aa1.72□□□□□ -2.13
GABPB1-209ENST00000559100 ZSCAN26Q16670 478 aa1.72□□□□□ -2.13
GABPB1-209ENST00000559100 HNRNPA1L2Q32P51 320 aaKnown RBP1.72□□□□□ -2.13
GABPB1-209ENST00000559100 HSDL1Q3SXM5 330 aa1.72□□□□□ -2.13
GABPB1-209ENST00000559100 LRRC10Q5BKY1 277 aa1.72□□□□□ -2.13
GABPB1-209ENST00000559100 CCNJQ5T5M9 372 aa1.72□□□□□ -2.13
GABPB1-209ENST00000559100 C6orf183Q5T699 404 aa1.72□□□□□ -2.13
GABPB1-209ENST00000559100 LCE1AQ5T7P2 110 aa1.72□□□□□ -2.13
GABPB1-209ENST00000559100 SPESP1Q6UW49 350 aa1.72□□□□□ -2.13
GABPB1-209ENST00000559100 PAMR1Q6UXH9 720 aa1.72□□□□□ -2.13
GABPB1-209ENST00000559100 C12orf54Q6X4T0 127 aa1.72□□□□□ -2.13
GABPB1-209ENST00000559100 CERS6Q6ZMG9 384 aa1.72□□□□□ -2.13
GABPB1-209ENST00000559100 Q6ZSR3 168 aa1.72□□□□□ -2.13
GABPB1-209ENST00000559100 PRSS41Q7RTY9 318 aa1.72□□□□□ -2.13
GABPB1-209ENST00000559100 PEX26Q7Z412 305 aa1.72□□□□□ -2.13
GABPB1-209ENST00000559100 TMEM135Q86UB9 458 aa1.72□□□□□ -2.13
GABPB1-209ENST00000559100 PRELID2Q8N945 189 aa1.72□□□□□ -2.13
GABPB1-209ENST00000559100 HSD17B11Q8NBQ5 300 aa1.72□□□□□ -2.13
GABPB1-209ENST00000559100 OR1N2Q8NGR9 330 aa1.72□□□□□ -2.13
GABPB1-209ENST00000559100 OR5K2Q8NHB8 316 aa1.72□□□□□ -2.13
GABPB1-209ENST00000559100 NUBPLQ8TB37 319 aa1.72□□□□□ -2.13
GABPB1-209ENST00000559100 ZNF596Q8TC21 504 aa1.72□□□□□ -2.13
GABPB1-209ENST00000559100 MITD1Q8WV92 249 aa1.72□□□□□ -2.13
GABPB1-209ENST00000559100 FRAT1Q92837 279 aaPredicted RBP1.72□□□□□ -2.13
GABPB1-209ENST00000559100 TMEM54Q969K7 222 aa1.72□□□□□ -2.13
GABPB1-209ENST00000559100 ZNF707Q96C28 371 aaPredicted RBP1.72□□□□□ -2.13
GABPB1-209ENST00000559100 ASB9Q96DX5 294 aa1.72□□□□□ -2.13
GABPB1-209ENST00000559100 PIK3IP1Q96FE7 263 aa1.72□□□□□ -2.13
GABPB1-209ENST00000559100 DNAJC1Q96KC8 554 aaKnown RBP1.72□□□□□ -2.13
GABPB1-209ENST00000559100 FCRL1Q96LA6 429 aa1.72□□□□□ -2.13
GABPB1-209ENST00000559100 C9orf72Q96LT7 481 aa1.72□□□□□ -2.13
GABPB1-209ENST00000559100 C1orf147Q96MC9 270 aaPredicted RBP1.72□□□□□ -2.13
GABPB1-209ENST00000559100 SERPINB12Q96P63 405 aa1.72□□□□□ -2.13
GABPB1-209ENST00000559100 RASL11BQ9BPW5 248 aa1.72□□□□□ -2.13
GABPB1-209ENST00000559100 MICU1Q9BPX6 476 aa1.72□□□□□ -2.13
GABPB1-209ENST00000559100 RHOXF2Q9BQY4 288 aa1.72□□□□□ -2.13
GABPB1-209ENST00000559100 RIOK2Q9BVS4 552 aaKnown RBP1.72□□□□□ -2.13
GABPB1-209ENST00000559100 OSBPL10Q9BXB5 764 aa1.72□□□□□ -2.13
GABPB1-209ENST00000559100 ZYG11BQ9C0D3 744 aa1.72□□□□□ -2.13
GABPB1-209ENST00000559100 RACGAP1Q9H0H5 632 aa1.72□□□□□ -2.13
GABPB1-209ENST00000559100 SRMSQ9H3Y6 488 aa1.72□□□□□ -2.13
GABPB1-209ENST00000559100 FBXO44Q9H4M3 255 aa1.72□□□□□ -2.13
GABPB1-209ENST00000559100 RPF2Q9H7B2 306 aaKnown RBP1.72□□□□□ -2.13
GABPB1-209ENST00000559100 ZNF702PQ9H963 129 aa1.72□□□□□ -2.13
GABPB1-209ENST00000559100 TMEM165Q9HC07 324 aa1.72□□□□□ -2.13
GABPB1-209ENST00000559100 EML4Q9HC35 981 aaKnown RBP1.72□□□□□ -2.13
GABPB1-209ENST00000559100 MYOZ2Q9NPC6 264 aa1.72□□□□□ -2.13
GABPB1-209ENST00000559100 MTRF1LQ9UGC7 380 aaKnown RBP1.72□□□□□ -2.13
GABPB1-209ENST00000559100 SHPKQ9UHJ6 478 aa1.72□□□□□ -2.13
GABPB1-209ENST00000559100 ZNF107Q9UII5 783 aaPredicted RBP1.72□□□□□ -2.13
GABPB1-209ENST00000559100 MOKQ9UQ07 419 aa1.72□□□□□ -2.13
GABPB1-209ENST00000559100 TNRQ92752 1358 aa1.72□□□□□ -2.13
GABPB1-209ENST00000559100 KLF18A0A0U1RQI7 1052 aa1.71□□□□□ -2.14
GABPB1-209ENST00000559100 CENPXA8MT69 81 aa1.71□□□□□ -2.14
GABPB1-209ENST00000559100 HIDE1A8MVS5 230 aa1.71□□□□□ -2.14
GABPB1-209ENST00000559100 SIVA1O15304 175 aa1.71□□□□□ -2.14
GABPB1-209ENST00000559100 HCRTR1O43613 425 aa1.71□□□□□ -2.14
GABPB1-209ENST00000559100 EIF4E2O60573 245 aaKnown RBP1.71□□□□□ -2.14
GABPB1-209ENST00000559100 FKBP6O75344 327 aa1.71□□□□□ -2.14
GABPB1-209ENST00000559100 AIFM1O95831 613 aa1.71□□□□□ -2.14
GABPB1-209ENST00000559100 HSPB1P04792 205 aaKnown RBP1.71□□□□□ -2.14
GABPB1-209ENST00000559100 ARG1P05089 322 aa1.71□□□□□ -2.14
GABPB1-209ENST00000559100 CLTAP09496 248 aa1.71□□□□□ -2.14
GABPB1-209ENST00000559100 NR2C1P13056 603 aa1.71□□□□□ -2.14
GABPB1-209ENST00000559100 HOXB8P17481 243 aaPredicted RBP1.71□□□□□ -2.14
GABPB1-209ENST00000559100 CNR1P21554 472 aa1.71□□□□□ -2.14
GABPB1-209ENST00000559100 CPN2P22792 545 aa1.71□□□□□ -2.14
GABPB1-209ENST00000559100 GABRR2P28476 465 aa1.71□□□□□ -2.14
GABPB1-209ENST00000559100 SERPINB5P36952 375 aa1.71□□□□□ -2.14
GABPB1-209ENST00000559100 VEGFCP49767 419 aa1.71□□□□□ -2.14
GABPB1-209ENST00000559100 CAV2P51636 162 aa1.71□□□□□ -2.14
GABPB1-209ENST00000559100 CCR8P51685 355 aa1.71□□□□□ -2.14
GABPB1-209ENST00000559100 STX17P56962 302 aa1.71□□□□□ -2.14
GABPB1-209ENST00000559100 EGFEM1PQ0D2K5 195 aa1.71□□□□□ -2.14
GABPB1-209ENST00000559100 TCP10Q12799 353 aa1.71□□□□□ -2.14
GABPB1-209ENST00000559100 ORC2Q13416 577 aaPredicted RBP1.71□□□□□ -2.14
GABPB1-209ENST00000559100 AQP6Q13520 282 aa1.71□□□□□ -2.14
GABPB1-209ENST00000559100 KIAA0087Q14695 138 aa1.71□□□□□ -2.14
GABPB1-209ENST00000559100 GABRA6Q16445 453 aa1.71□□□□□ -2.14
GABPB1-209ENST00000559100 ZNF829Q3KNS6 432 aaPredicted RBP1.71□□□□□ -2.14
GABPB1-209ENST00000559100 NKAIN1Q4KMZ8 207 aa1.71□□□□□ -2.14
GABPB1-209ENST00000559100 FBXO48Q5FWF7 155 aa1.71□□□□□ -2.14
GABPB1-209ENST00000559100 STUMQ69YW2 141 aa1.71□□□□□ -2.14
GABPB1-209ENST00000559100 ULK3Q6PHR2 472 aa1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms