RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 B3GLCTQ6Y288 498 aa15.97■□□□□ 0.15
CLPX-203ENST00000558958 ZNF100Q8IYN0 542 aa15.97■□□□□ 0.15
CLPX-203ENST00000558958 RHNO1Q9BSD3 238 aa15.97■□□□□ 0.15
CLPX-203ENST00000558958 C12orf49Q9H741 205 aa15.97■□□□□ 0.15
CLPX-203ENST00000558958 SCN3BQ9NY72 215 aa15.97■□□□□ 0.15
CLPX-203ENST00000558958 HAO2Q9NYQ3 351 aa15.97■□□□□ 0.15
CLPX-203ENST00000558958 PSORS1C1Q9UIG5 152 aa15.97■□□□□ 0.15
CLPX-203ENST00000558958 SH3BGRL2Q9UJC5 107 aa15.97■□□□□ 0.15
CLPX-203ENST00000558958 ARHGAP21Q5T5U3 1957 aa15.97■□□□□ 0.15
CLPX-203ENST00000558958 TNFSF13O75888 250 aa15.97■□□□□ 0.15
CLPX-203ENST00000558958 TMIGD3P0DMS9 266 aaPredicted RBP15.97■□□□□ 0.15
CLPX-203ENST00000558958 OR3A2P47893 321 aa15.97■□□□□ 0.15
CLPX-203ENST00000558958 CASP6P55212 293 aa15.97■□□□□ 0.15
CLPX-203ENST00000558958 GPR137CQ8N3F9 429 aa15.97■□□□□ 0.15
CLPX-203ENST00000558958 CNEP1R1Q8N9A8 125 aa15.97■□□□□ 0.15
CLPX-203ENST00000558958 POMGNT2Q8NAT1 580 aa15.97■□□□□ 0.15
CLPX-203ENST00000558958 NAXEQ8NCW5 288 aa15.97■□□□□ 0.15
CLPX-203ENST00000558958 OR6K6Q8NGW6 343 aa15.97■□□□□ 0.15
CLPX-203ENST00000558958 OR6K3Q8NGY3 331 aa15.97■□□□□ 0.15
CLPX-203ENST00000558958 NSMAFQ92636 917 aa15.97■□□□□ 0.15
CLPX-203ENST00000558958 GGHQ92820 318 aa15.97■□□□□ 0.15
CLPX-203ENST00000558958 ZMYND19Q96E35 227 aaPredicted RBP15.97■□□□□ 0.15
CLPX-203ENST00000558958 RNFT2Q96EX2 444 aa15.97■□□□□ 0.15
CLPX-203ENST00000558958 ULBP2Q9BZM5 246 aa15.97■□□□□ 0.15
CLPX-203ENST00000558958 B3GAT2Q9NPZ5 323 aa15.97■□□□□ 0.15
CLPX-203ENST00000558958 SLC7A10Q9NS82 523 aa15.97■□□□□ 0.15
CLPX-203ENST00000558958 MRPS18AQ9NVS2 196 aaKnown RBP15.97■□□□□ 0.15
CLPX-203ENST00000558958 FKBP14Q9NWM8 211 aa15.97■□□□□ 0.15
CLPX-203ENST00000558958 BLOC1S6Q9UL45 172 aa15.97■□□□□ 0.15
CLPX-203ENST00000558958 COA3Q9Y2R0 106 aaPredicted RBP15.97■□□□□ 0.15
CLPX-203ENST00000558958 TPRKBQ9Y3C4 175 aa15.97■□□□□ 0.15
CLPX-203ENST00000558958 KMT2BQ9UMN6 2715 aaPredicted RBP15.96■□□□□ 0.15
CLPX-203ENST00000558958 TRGV8A0A0C4DH27 118 aa15.96■□□□□ 0.14
CLPX-203ENST00000558958 E9PLN8 166 aa15.96■□□□□ 0.14
CLPX-203ENST00000558958 DHHO43323 396 aa15.96■□□□□ 0.14
CLPX-203ENST00000558958 TNFAIP8O95379 198 aa15.96■□□□□ 0.14
CLPX-203ENST00000558958 IGHV3-9P01782 118 aa15.96■□□□□ 0.14
CLPX-203ENST00000558958 CA7P43166 264 aa15.96■□□□□ 0.14
CLPX-203ENST00000558958 CENPAP49450 140 aa15.96■□□□□ 0.14
CLPX-203ENST00000558958 GLO1Q04760 184 aa15.96■□□□□ 0.14
CLPX-203ENST00000558958 PMPCAQ10713 525 aa15.96■□□□□ 0.14
CLPX-203ENST00000558958 GGTLC2Q14390 218 aa15.96■□□□□ 0.14
CLPX-203ENST00000558958 LCN1P1Q5VSP4 162 aa15.96■□□□□ 0.14
CLPX-203ENST00000558958 VWA1Q6PCB0 445 aa15.96■□□□□ 0.14
CLPX-203ENST00000558958 LINGO2Q7L985 606 aa15.96■□□□□ 0.14
CLPX-203ENST00000558958 ZNF540Q8NDQ6 660 aa15.96■□□□□ 0.14
CLPX-203ENST00000558958 ALKBH3Q96Q83 286 aaPredicted RBP15.96■□□□□ 0.14
CLPX-203ENST00000558958 DMRTA2Q96SC8 542 aa15.96■□□□□ 0.14
CLPX-203ENST00000558958 VKORC1Q9BQB6 163 aa15.96■□□□□ 0.14
CLPX-203ENST00000558958 DUSP21Q9H596 190 aa15.96■□□□□ 0.14
CLPX-203ENST00000558958 CRLF2Q9HC73 371 aa15.96■□□□□ 0.14
CLPX-203ENST00000558958 PAK1IP1Q9NWT1 392 aaPredicted RBP15.96■□□□□ 0.14
CLPX-203ENST00000558958 CNOT2Q9NZN8 540 aaKnown RBP15.96■□□□□ 0.14
CLPX-203ENST00000558958 OSGIN2Q9Y236 505 aa15.96■□□□□ 0.14
CLPX-203ENST00000558958 EFCAB10A6NFE3 127 aa15.95■□□□□ 0.14
CLPX-203ENST00000558958 TRIM64A6NGJ6 449 aa15.95■□□□□ 0.14
CLPX-203ENST00000558958 PTGES3LE9PB15 166 aa15.95■□□□□ 0.14
CLPX-203ENST00000558958 STSP08842 583 aa15.95■□□□□ 0.14
CLPX-203ENST00000558958 PIPP12273 146 aaPredicted RBP15.95■□□□□ 0.14
CLPX-203ENST00000558958 BLVRAP53004 296 aa15.95■□□□□ 0.14
CLPX-203ENST00000558958 SLC35A2P78381 396 aa15.95■□□□□ 0.14
CLPX-203ENST00000558958 MRPL49Q13405 166 aaKnown RBP15.95■□□□□ 0.14
CLPX-203ENST00000558958 KCTD21Q4G0X4 260 aa15.95■□□□□ 0.14
CLPX-203ENST00000558958 LYPD4Q6UWN0 246 aa15.95■□□□□ 0.14
CLPX-203ENST00000558958 TFAP2EQ6VUC0 442 aa15.95■□□□□ 0.14
CLPX-203ENST00000558958 BTLAQ7Z6A9 289 aa15.95■□□□□ 0.14
CLPX-203ENST00000558958 GLB1L2Q8IW92 636 aa15.95■□□□□ 0.14
CLPX-203ENST00000558958 ZNF511Q8NB15 262 aa15.95■□□□□ 0.14
CLPX-203ENST00000558958 STARD4Q96DR4 205 aa15.95■□□□□ 0.14
CLPX-203ENST00000558958 LGALS12Q96DT0 336 aa15.95■□□□□ 0.14
CLPX-203ENST00000558958 ZNF837Q96EG3 531 aaPredicted RBP15.95■□□□□ 0.14
CLPX-203ENST00000558958 ZNF696Q9H7X3 374 aa15.95■□□□□ 0.14
CLPX-203ENST00000558958 MARCH7Q9H992 704 aa15.95■□□□□ 0.14
CLPX-203ENST00000558958 GPR35Q9HC97 309 aa15.95■□□□□ 0.14
CLPX-203ENST00000558958 PLSCR4Q9NRQ2 329 aa15.95■□□□□ 0.14
CLPX-203ENST00000558958 MALT1Q9UDY8 824 aa15.95■□□□□ 0.14
CLPX-203ENST00000558958 MEMO1Q9Y316 297 aa15.95■□□□□ 0.14
CLPX-203ENST00000558958 UGT2A1Q9Y4X1 527 aa15.95■□□□□ 0.14
CLPX-203ENST00000558958 PHF3Q92576 2039 aaKnown RBP15.94■□□□□ 0.14
CLPX-203ENST00000558958 RPL36A-HNRNPH2H7BZ11 118 aa15.94■□□□□ 0.14
CLPX-203ENST00000558958 KRT33AO76009 404 aa15.94■□□□□ 0.14
CLPX-203ENST00000558958 GPANK1O95872 356 aa15.94■□□□□ 0.14
CLPX-203ENST00000558958 CGAP01215 116 aa15.94■□□□□ 0.14
CLPX-203ENST00000558958 CTSSP25774 331 aa15.94■□□□□ 0.14
CLPX-203ENST00000558958 LAP3P28838 519 aa15.94■□□□□ 0.14
CLPX-203ENST00000558958 GABARAPL2P60520 117 aa15.94■□□□□ 0.14
CLPX-203ENST00000558958 ROR2Q01974 943 aaKnown RBP15.94■□□□□ 0.14
CLPX-203ENST00000558958 HSF2Q03933 536 aa15.94■□□□□ 0.14
CLPX-203ENST00000558958 RAB40BQ12829 278 aa15.94■□□□□ 0.14
CLPX-203ENST00000558958 POU4F2Q12837 409 aa15.94■□□□□ 0.14
CLPX-203ENST00000558958 KLHL22Q53GT1 634 aa15.94■□□□□ 0.14
CLPX-203ENST00000558958 FBXW9Q5XUX1 488 aa15.94■□□□□ 0.14
CLPX-203ENST00000558958 AHSA2Q719I0 299 aa15.94■□□□□ 0.14
CLPX-203ENST00000558958 SLC26A10Q8NG04 563 aa15.94■□□□□ 0.14
CLPX-203ENST00000558958 OR51G2Q8NGK0 314 aa15.94■□□□□ 0.14
CLPX-203ENST00000558958 IPCEF1Q8WWN9 437 aaPredicted RBP15.94■□□□□ 0.14
CLPX-203ENST00000558958 SGCDQ92629 289 aa15.94■□□□□ 0.14
CLPX-203ENST00000558958 FOXN4Q96NZ1 517 aa15.94■□□□□ 0.14
CLPX-203ENST00000558958 SFXN3Q9BWM7 321 aa15.94■□□□□ 0.14
CLPX-203ENST00000558958 RBM24Q9BX46 236 aaKnown RBP15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms