RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 SLC9A3P48764 834 aa10.41□□□□□ -0.74
TPM1-216ENST00000558910 DAP3P51398 398 aaKnown RBP10.41□□□□□ -0.74
TPM1-216ENST00000558910 ERVK-25P63136 954 aa10.41□□□□□ -0.74
TPM1-216ENST00000558910 SPIBQ01892 262 aa10.41□□□□□ -0.74
TPM1-216ENST00000558910 HGFACQ04756 655 aa10.41□□□□□ -0.74
TPM1-216ENST00000558910 CHRNB3Q05901 458 aa10.41□□□□□ -0.74
TPM1-216ENST00000558910 SNTB2Q13425 540 aaKnown RBP10.41□□□□□ -0.74
TPM1-216ENST00000558910 KRT72Q14CN4 511 aa10.41□□□□□ -0.74
TPM1-216ENST00000558910 ALKBH6Q3KRA9 238 aa10.41□□□□□ -0.74
TPM1-216ENST00000558910 GKAP1Q5VSY0 366 aaPredicted RBP10.41□□□□□ -0.74
TPM1-216ENST00000558910 OTPQ5XKR4 325 aa10.41□□□□□ -0.74
TPM1-216ENST00000558910 PODNL1Q6PEZ8 512 aa10.41□□□□□ -0.74
TPM1-216ENST00000558910 OAFQ86UD1 273 aa10.41□□□□□ -0.74
TPM1-216ENST00000558910 DTX2Q86UW9 622 aa10.41□□□□□ -0.74
TPM1-216ENST00000558910 CDK20Q8IZL9 346 aa10.41□□□□□ -0.74
TPM1-216ENST00000558910 OFCC1Q8IZS5 231 aa10.41□□□□□ -0.74
TPM1-216ENST00000558910 ZCCHC24Q8N2G6 241 aaKnown RBP10.41□□□□□ -0.74
TPM1-216ENST00000558910 SVOPLQ8N434 492 aa10.41□□□□□ -0.74
TPM1-216ENST00000558910 SLC22A24Q8N4F4 322 aa10.41□□□□□ -0.74
TPM1-216ENST00000558910 NOXO1Q8NFA2 376 aa10.41□□□□□ -0.74
TPM1-216ENST00000558910 MAGEE2Q8TD90 523 aaPredicted RBP10.41□□□□□ -0.74
TPM1-216ENST00000558910 HDAC2Q92769 488 aaKnown RBP10.41□□□□□ -0.74
TPM1-216ENST00000558910 MCHR2Q969V1 340 aa10.41□□□□□ -0.74
TPM1-216ENST00000558910 LRR1Q96L50 414 aa10.41□□□□□ -0.74
TPM1-216ENST00000558910 KRTAP4-6Q9BYQ5 205 aa10.41□□□□□ -0.74
TPM1-216ENST00000558910 NMNAT1Q9HAN9 279 aaPredicted RBP10.41□□□□□ -0.74
TPM1-216ENST00000558910 CA10Q9NS85 328 aa10.41□□□□□ -0.74
TPM1-216ENST00000558910 ENPP4Q9Y6X5 453 aa10.41□□□□□ -0.74
TPM1-216ENST00000558910 IGKV1D-43A0A0B4J1Z2 117 aa10.4□□□□□ -0.74
TPM1-216ENST00000558910 TRBV4-1A0A0J9YWV2 114 aa10.4□□□□□ -0.74
TPM1-216ENST00000558910 A0A1W2PPL8 197 aa10.4□□□□□ -0.74
TPM1-216ENST00000558910 B2RBV5 119 aa10.4□□□□□ -0.74
TPM1-216ENST00000558910 ARPC2O15144 300 aa10.4□□□□□ -0.74
TPM1-216ENST00000558910 GPRIN2O60269 458 aa10.4□□□□□ -0.74
TPM1-216ENST00000558910 PDE5AO76074 875 aa10.4□□□□□ -0.74
TPM1-216ENST00000558910 H1F0P07305 194 aaKnown RBP10.4□□□□□ -0.74
TPM1-216ENST00000558910 THRBP10828 461 aa10.4□□□□□ -0.74
TPM1-216ENST00000558910 ARR3P36575 388 aa10.4□□□□□ -0.74
TPM1-216ENST00000558910 SERPINF1P36955 418 aa10.4□□□□□ -0.74
TPM1-216ENST00000558910 ZNF84P51523 738 aa10.4□□□□□ -0.74
TPM1-216ENST00000558910 VLDLRP98155 873 aa10.4□□□□□ -0.74
TPM1-216ENST00000558910 DAG1Q14118 895 aa10.4□□□□□ -0.74
TPM1-216ENST00000558910 C11orf71Q6IPW1 123 aa10.4□□□□□ -0.74
TPM1-216ENST00000558910 ZNF544Q6NX49 715 aa10.4□□□□□ -0.74
TPM1-216ENST00000558910 PRSS57Q6UWY2 283 aa10.4□□□□□ -0.74
TPM1-216ENST00000558910 C16orf89Q6UX73 402 aa10.4□□□□□ -0.74
TPM1-216ENST00000558910 RINLQ6ZS11 566 aa10.4□□□□□ -0.74
TPM1-216ENST00000558910 MBOAT2Q6ZWT7 520 aa10.4□□□□□ -0.74
TPM1-216ENST00000558910 SLC16A14Q7RTX9 510 aa10.4□□□□□ -0.74
TPM1-216ENST00000558910 TSEN54Q7Z6J9 526 aaKnown RBP10.4□□□□□ -0.74
TPM1-216ENST00000558910 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.4□□□□□ -0.74
TPM1-216ENST00000558910 BIVMQ86UB2 503 aa10.4□□□□□ -0.74
TPM1-216ENST00000558910 PGAM4Q8N0Y7 254 aa10.4□□□□□ -0.74
TPM1-216ENST00000558910 FITM2Q8N6M3 262 aa10.4□□□□□ -0.74
TPM1-216ENST00000558910 ZNF525Q8N782 197 aa10.4□□□□□ -0.74
TPM1-216ENST00000558910 CCDC197Q8NCU1 140 aa10.4□□□□□ -0.74
TPM1-216ENST00000558910 ACOT11Q8WXI4 607 aaPredicted RBP10.4□□□□□ -0.74
TPM1-216ENST00000558910 COX4I2Q96KJ9 171 aa10.4□□□□□ -0.74
TPM1-216ENST00000558910 NSMCE2Q96MF7 247 aa10.4□□□□□ -0.74
TPM1-216ENST00000558910 TSPAN32Q96QS1 320 aa10.4□□□□□ -0.74
TPM1-216ENST00000558910 SEPHS2Q99611 448 aa10.4□□□□□ -0.74
TPM1-216ENST00000558910 KATNB1Q9BVA0 655 aa10.4□□□□□ -0.74
TPM1-216ENST00000558910 DCAF13Q9NV06 445 aaKnown RBP10.4□□□□□ -0.74
TPM1-216ENST00000558910 TMEM38BQ9NVV0 291 aa10.4□□□□□ -0.74
TPM1-216ENST00000558910 ZNF224Q9NZL3 707 aa10.4□□□□□ -0.74
TPM1-216ENST00000558910 SAMD4AQ9UPU9 718 aaKnown RBP10.4□□□□□ -0.74
TPM1-216ENST00000558910 PMF1-BGLAPU3KQ54 211 aa10.4□□□□□ -0.74
TPM1-216ENST00000558910 CSPG4Q6UVK1 2322 aa10.39□□□□□ -0.75
TPM1-216ENST00000558910 TLN2Q9Y4G6 2542 aa10.39□□□□□ -0.75
TPM1-216ENST00000558910 IGHV4-30-2A0A087WSY4 118 aa10.39□□□□□ -0.75
TPM1-216ENST00000558910 CDC42EP2O14613 210 aa10.39□□□□□ -0.75
TPM1-216ENST00000558910 RGS9O75916 674 aaPredicted RBP10.39□□□□□ -0.75
TPM1-216ENST00000558910 PRSS23O95084 383 aa10.39□□□□□ -0.75
TPM1-216ENST00000558910 UBL3O95164 117 aa10.39□□□□□ -0.75
TPM1-216ENST00000558910 FARS2O95363 451 aaKnown RBP10.39□□□□□ -0.75
TPM1-216ENST00000558910 IGKV3-15P01624 115 aa10.39□□□□□ -0.75
TPM1-216ENST00000558910 IGLV1-44P01699 117 aa10.39□□□□□ -0.75
TPM1-216ENST00000558910 OR8G3PP0DMU2 310 aa10.39□□□□□ -0.75
TPM1-216ENST00000558910 SNRPD2P62316 118 aaKnown RBP10.39□□□□□ -0.75
TPM1-216ENST00000558910 GALK2Q01415 458 aa10.39□□□□□ -0.75
TPM1-216ENST00000558910 PRKCDQ05655 676 aa10.39□□□□□ -0.75
TPM1-216ENST00000558910 DBPQ10586 325 aaPredicted RBP10.39□□□□□ -0.75
TPM1-216ENST00000558910 SEC23BQ15437 767 aa10.39□□□□□ -0.75
TPM1-216ENST00000558910 SAMD4BQ5PRF9 694 aaKnown RBP10.39□□□□□ -0.75
TPM1-216ENST00000558910 SLC7A13Q8TCU3 470 aa10.39□□□□□ -0.75
TPM1-216ENST00000558910 MCUR1Q96AQ8 359 aa10.39□□□□□ -0.75
TPM1-216ENST00000558910 PYURFQ96I23 114 aa10.39□□□□□ -0.75
TPM1-216ENST00000558910 NSL1Q96IY1 281 aa10.39□□□□□ -0.75
TPM1-216ENST00000558910 SORCS2Q96PQ0 1159 aa10.39□□□□□ -0.75
TPM1-216ENST00000558910 SYT3Q9BQG1 590 aa10.39□□□□□ -0.75
TPM1-216ENST00000558910 RHNO1Q9BSD3 238 aa10.39□□□□□ -0.75
TPM1-216ENST00000558910 REG4Q9BYZ8 158 aa10.39□□□□□ -0.75
TPM1-216ENST00000558910 TXNIPQ9H3M7 391 aa10.39□□□□□ -0.75
TPM1-216ENST00000558910 TPK1Q9H3S4 243 aa10.39□□□□□ -0.75
TPM1-216ENST00000558910 DYNLRB1Q9NP97 96 aa10.39□□□□□ -0.75
TPM1-216ENST00000558910 B3GNT2Q9NY97 397 aa10.39□□□□□ -0.75
TPM1-216ENST00000558910 NDUFAF4Q9P032 175 aa10.39□□□□□ -0.75
TPM1-216ENST00000558910 CRNNQ9UBG3 495 aaPredicted RBP10.39□□□□□ -0.75
TPM1-216ENST00000558910 AURKCQ9UQB9 309 aa10.39□□□□□ -0.75
TPM1-216ENST00000558910 ADAM18Q9Y3Q7 739 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms