RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 SOCS2O14508 198 aa10.77□□□□□ -0.69
SMAD3-205ENST00000558428 HS3ST1O14792 307 aa10.77□□□□□ -0.69
SMAD3-205ENST00000558428 ENTPD5O75356 428 aa10.77□□□□□ -0.69
SMAD3-205ENST00000558428 E2F6O75461 281 aa10.77□□□□□ -0.69
SMAD3-205ENST00000558428 FARS2O95363 451 aaKnown RBP10.77□□□□□ -0.69
SMAD3-205ENST00000558428 PPP1R3DO95685 299 aa10.77□□□□□ -0.69
SMAD3-205ENST00000558428 HLA-HP01893 362 aa10.77□□□□□ -0.69
SMAD3-205ENST00000558428 RAF1P04049 648 aa10.77□□□□□ -0.69
SMAD3-205ENST00000558428 OR8G3PP0DMU2 310 aa10.77□□□□□ -0.69
SMAD3-205ENST00000558428 CBR1P16152 277 aa10.77□□□□□ -0.69
SMAD3-205ENST00000558428 SLC6A6P31641 620 aa10.77□□□□□ -0.69
SMAD3-205ENST00000558428 ZNF133P52736 654 aaPredicted RBP10.77□□□□□ -0.69
SMAD3-205ENST00000558428 CDH11P55287 796 aa10.77□□□□□ -0.69
SMAD3-205ENST00000558428 NPRL3Q12980 569 aa10.77□□□□□ -0.69
SMAD3-205ENST00000558428 GSG1Q2KHT4 349 aa10.77□□□□□ -0.69
SMAD3-205ENST00000558428 RFX4Q33E94 735 aa10.77□□□□□ -0.69
SMAD3-205ENST00000558428 THEM4Q5T1C6 240 aa10.77□□□□□ -0.69
SMAD3-205ENST00000558428 ZNF620Q6ZNG0 422 aa10.77□□□□□ -0.69
SMAD3-205ENST00000558428 MDP1Q86V88 176 aa10.77□□□□□ -0.69
SMAD3-205ENST00000558428 DEPDC4Q8N2C3 294 aa10.77□□□□□ -0.69
SMAD3-205ENST00000558428 SLC22A24Q8N4F4 322 aa10.77□□□□□ -0.69
SMAD3-205ENST00000558428 PAPD5Q8NDF8 572 aaKnown RBP10.77□□□□□ -0.69
SMAD3-205ENST00000558428 LILRB1Q8NHL6 650 aaPredicted RBP10.77□□□□□ -0.69
SMAD3-205ENST00000558428 GIPC3Q8TF64 312 aa10.77□□□□□ -0.69
SMAD3-205ENST00000558428 HTRA1Q92743 480 aa10.77□□□□□ -0.69
SMAD3-205ENST00000558428 NINJ1Q92982 152 aa10.77□□□□□ -0.69
SMAD3-205ENST00000558428 GTPBP3Q969Y2 492 aaKnown RBP10.77□□□□□ -0.69
SMAD3-205ENST00000558428 NMD3Q96D46 503 aaKnown RBP10.77□□□□□ -0.69
SMAD3-205ENST00000558428 RADILQ96JH8 1075 aa10.77□□□□□ -0.69
SMAD3-205ENST00000558428 SAMD8Q96LT4 415 aa10.77□□□□□ -0.69
SMAD3-205ENST00000558428 ERMAPQ96PL5 475 aaPredicted RBP10.77□□□□□ -0.69
SMAD3-205ENST00000558428 SH3GL3Q99963 347 aa10.77□□□□□ -0.69
SMAD3-205ENST00000558428 KCNS3Q9BQ31 491 aa10.77□□□□□ -0.69
SMAD3-205ENST00000558428 IFT27Q9BW83 186 aa10.77□□□□□ -0.69
SMAD3-205ENST00000558428 EGLN3Q9H6Z9 239 aa10.77□□□□□ -0.69
SMAD3-205ENST00000558428 SMURF2Q9HAU4 748 aa10.77□□□□□ -0.69
SMAD3-205ENST00000558428 CRNNQ9UBG3 495 aaPredicted RBP10.77□□□□□ -0.69
SMAD3-205ENST00000558428 POU2F3Q9UKI9 436 aa10.77□□□□□ -0.69
SMAD3-205ENST00000558428 ITGB1BP2Q9UKP3 347 aa10.77□□□□□ -0.69
SMAD3-205ENST00000558428 USF3Q68DE3 2245 aa10.76□□□□□ -0.69
SMAD3-205ENST00000558428 SLC22A23A1A5C7 686 aa10.76□□□□□ -0.69
SMAD3-205ENST00000558428 PRSS37A4D1T9 235 aa10.76□□□□□ -0.69
SMAD3-205ENST00000558428 TIPRLO75663 272 aa10.76□□□□□ -0.69
SMAD3-205ENST00000558428 UBL3O95164 117 aa10.76□□□□□ -0.69
SMAD3-205ENST00000558428 ATE1O95260 518 aa10.76□□□□□ -0.69
SMAD3-205ENST00000558428 RAB36O95755 333 aa10.76□□□□□ -0.69
SMAD3-205ENST00000558428 TXNDC12O95881 172 aa10.76□□□□□ -0.69
SMAD3-205ENST00000558428 IGKV3-15P01624 115 aa10.76□□□□□ -0.69
SMAD3-205ENST00000558428 IGLV1-44P01699 117 aa10.76□□□□□ -0.69
SMAD3-205ENST00000558428 CECR9P0C854 216 aa10.76□□□□□ -0.69
SMAD3-205ENST00000558428 APEHP13798 732 aaKnown RBP10.76□□□□□ -0.69
SMAD3-205ENST00000558428 CDAP32320 146 aa10.76□□□□□ -0.69
SMAD3-205ENST00000558428 ARR3P36575 388 aa10.76□□□□□ -0.69
SMAD3-205ENST00000558428 IDH3GP51553 393 aaPredicted RBP10.76□□□□□ -0.69
SMAD3-205ENST00000558428 PIGFQ07326 219 aa10.76□□□□□ -0.69
SMAD3-205ENST00000558428 CCNIQ14094 377 aa10.76□□□□□ -0.69
SMAD3-205ENST00000558428 C3orf36Q3SXR2 165 aa10.76□□□□□ -0.69
SMAD3-205ENST00000558428 ZNF672Q499Z4 452 aaPredicted RBP10.76□□□□□ -0.69
SMAD3-205ENST00000558428 RPL13AP3Q6NVV1 102 aa10.76□□□□□ -0.69
SMAD3-205ENST00000558428 SLC25A47Q6Q0C1 308 aa10.76□□□□□ -0.69
SMAD3-205ENST00000558428 C20orf204Q6ZNR8 217 aa10.76□□□□□ -0.69
SMAD3-205ENST00000558428 RASSF6Q6ZTQ3 369 aa10.76□□□□□ -0.69
SMAD3-205ENST00000558428 SLC16A14Q7RTX9 510 aa10.76□□□□□ -0.69
SMAD3-205ENST00000558428 TMEM179BQ7Z7N9 219 aa10.76□□□□□ -0.69
SMAD3-205ENST00000558428 SKA3Q8IX90 412 aa10.76□□□□□ -0.69
SMAD3-205ENST00000558428 FAM169BQ8N8A8 192 aa10.76□□□□□ -0.69
SMAD3-205ENST00000558428 OR52L1Q8NGH7 329 aa10.76□□□□□ -0.69
SMAD3-205ENST00000558428 FBXW5Q969U6 566 aa10.76□□□□□ -0.69
SMAD3-205ENST00000558428 UTP4Q969X6 686 aaKnown RBP10.76□□□□□ -0.69
SMAD3-205ENST00000558428 DGCR6LQ9BY27 220 aa10.76□□□□□ -0.69
SMAD3-205ENST00000558428 DENND2DQ9H6A0 471 aaPredicted RBP10.76□□□□□ -0.69
SMAD3-205ENST00000558428 B3GNT2Q9NY97 397 aa10.76□□□□□ -0.69
SMAD3-205ENST00000558428 ZNF224Q9NZL3 707 aa10.76□□□□□ -0.69
SMAD3-205ENST00000558428 PDP1Q9P0J1 537 aaPredicted RBP10.76□□□□□ -0.69
SMAD3-205ENST00000558428 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.76□□□□□ -0.69
SMAD3-205ENST00000558428 DNAJB9Q9UBS3 223 aa10.76□□□□□ -0.69
SMAD3-205ENST00000558428 MOKQ9UQ07 419 aa10.76□□□□□ -0.69
SMAD3-205ENST00000558428 CDH10Q9Y6N8 788 aa10.76□□□□□ -0.69
SMAD3-205ENST00000558428 VPS13CQ709C8 3753 aa10.75□□□□□ -0.69
SMAD3-205ENST00000558428 A0A1W2PPL8 197 aa10.75□□□□□ -0.69
SMAD3-205ENST00000558428 ARRDC5A6NEK1 342 aa10.75□□□□□ -0.69
SMAD3-205ENST00000558428 ATP6V1G2-DDX39BF2Z307 99 aa10.75□□□□□ -0.69
SMAD3-205ENST00000558428 IMPA2O14732 288 aa10.75□□□□□ -0.69
SMAD3-205ENST00000558428 AHCYL1O43865 530 aa10.75□□□□□ -0.69
SMAD3-205ENST00000558428 DEAF1O75398 565 aaPredicted RBP10.75□□□□□ -0.69
SMAD3-205ENST00000558428 CRYAAP02489 173 aa10.75□□□□□ -0.69
SMAD3-205ENST00000558428 CELA3BP08861 270 aa10.75□□□□□ -0.69
SMAD3-205ENST00000558428 PATE4P0C8F1 98 aa10.75□□□□□ -0.69
SMAD3-205ENST00000558428 CD53P19397 219 aa10.75□□□□□ -0.69
SMAD3-205ENST00000558428 NPR2P20594 1047 aa10.75□□□□□ -0.69
SMAD3-205ENST00000558428 GSTM3P21266 225 aa10.75□□□□□ -0.69
SMAD3-205ENST00000558428 NOS3P29474 1203 aa10.75□□□□□ -0.69
SMAD3-205ENST00000558428 GUCA1AP43080 201 aaPredicted RBP10.75□□□□□ -0.69
SMAD3-205ENST00000558428 GIPRP48546 466 aa10.75□□□□□ -0.69
SMAD3-205ENST00000558428 PTDSS1P48651 473 aaKnown RBP10.75□□□□□ -0.69
SMAD3-205ENST00000558428 RAB1AP62820 205 aa10.75□□□□□ -0.69
SMAD3-205ENST00000558428 MRPS34P82930 218 aaKnown RBP10.75□□□□□ -0.69
SMAD3-205ENST00000558428 NAAAQ02083 359 aa10.75□□□□□ -0.69
SMAD3-205ENST00000558428 SGCAQ16586 387 aa10.75□□□□□ -0.69
SMAD3-205ENST00000558428 NRN1LQ496H8 165 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms