RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 OR51B6Q9H340 312 aa4.37□□□□□ -1.71
SPG11-208ENST00000558155 PRDM13Q9H4Q3 707 aa4.37□□□□□ -1.71
SPG11-208ENST00000558155 C12orf10Q9HB07 376 aa4.37□□□□□ -1.71
SPG11-208ENST00000558155 ASIC5Q9NY37 505 aa4.37□□□□□ -1.71
SPG11-208ENST00000558155 ZNF224Q9NZL3 707 aa4.37□□□□□ -1.71
SPG11-208ENST00000558155 C1RLQ9NZP8 487 aa4.37□□□□□ -1.71
SPG11-208ENST00000558155 SELENONQ9NZV5 590 aa4.37□□□□□ -1.71
SPG11-208ENST00000558155 OR5V1Q9UGF6 321 aa4.37□□□□□ -1.71
SPG11-208ENST00000558155 KLHL21Q9UJP4 597 aa4.37□□□□□ -1.71
SPG11-208ENST00000558155 ZDHHC8Q9ULC8 765 aa4.37□□□□□ -1.71
SPG11-208ENST00000558155 IFT52Q9Y366 437 aa4.37□□□□□ -1.71
SPG11-208ENST00000558155 IGHV3OR16-10A0A075B7F0 116 aa4.36□□□□□ -1.71
SPG11-208ENST00000558155 A0A087WUJ7 227 aa4.36□□□□□ -1.71
SPG11-208ENST00000558155 A0A0G2JPF8 293 aa4.36□□□□□ -1.71
SPG11-208ENST00000558155 C5orf63A6NC05 138 aa4.36□□□□□ -1.71
SPG11-208ENST00000558155 TMEM247A6NEH6 219 aa4.36□□□□□ -1.71
SPG11-208ENST00000558155 VGLL3A8MV65 326 aa4.36□□□□□ -1.71
SPG11-208ENST00000558155 A8MXK9 166 aa4.36□□□□□ -1.71
SPG11-208ENST00000558155 HNRNPCL2B2RXH8 293 aa4.36□□□□□ -1.71
SPG11-208ENST00000558155 HNRNPCL3B7ZW38 293 aa4.36□□□□□ -1.71
SPG11-208ENST00000558155 TM9SF1O15321 606 aa4.36□□□□□ -1.71
SPG11-208ENST00000558155 HNRNPCL1O60812 293 aaKnown RBP4.36□□□□□ -1.71
SPG11-208ENST00000558155 FZD7O75084 574 aa4.36□□□□□ -1.71
SPG11-208ENST00000558155 CLPXO76031 633 aa4.36□□□□□ -1.71
SPG11-208ENST00000558155 MFN2O95140 757 aa4.36□□□□□ -1.71
SPG11-208ENST00000558155 OR6A2O95222 327 aa4.36□□□□□ -1.71
SPG11-208ENST00000558155 TGDSO95455 350 aa4.36□□□□□ -1.71
SPG11-208ENST00000558155 PLATP00750 562 aa4.36□□□□□ -1.71
SPG11-208ENST00000558155 IGHV2-70P01814 119 aa4.36□□□□□ -1.71
SPG11-208ENST00000558155 ADH4P08319 380 aa4.36□□□□□ -1.71
SPG11-208ENST00000558155 CSF1P09603 554 aa4.36□□□□□ -1.71
SPG11-208ENST00000558155 HNRNPCL4P0DMR1 293 aa4.36□□□□□ -1.71
SPG11-208ENST00000558155 IGHV4-38-2P0DP08 117 aa4.36□□□□□ -1.71
SPG11-208ENST00000558155 PRG2P13727 222 aa4.36□□□□□ -1.71
SPG11-208ENST00000558155 KRT4P19013 534 aa4.36□□□□□ -1.71
SPG11-208ENST00000558155 TNFRSF1AP19438 455 aa4.36□□□□□ -1.71
SPG11-208ENST00000558155 CCNOP22674 350 aa4.36□□□□□ -1.71
SPG11-208ENST00000558155 CBLP22681 906 aa4.36□□□□□ -1.71
SPG11-208ENST00000558155 TNFSF4P23510 183 aa4.36□□□□□ -1.71
SPG11-208ENST00000558155 AHCYP23526 432 aa4.36□□□□□ -1.71
SPG11-208ENST00000558155 ALDH3A1P30838 453 aa4.36□□□□□ -1.71
SPG11-208ENST00000558155 SERPINB5P36952 375 aa4.36□□□□□ -1.71
SPG11-208ENST00000558155 CLNS1AP54105 237 aaKnown RBP4.36□□□□□ -1.71
SPG11-208ENST00000558155 CRISP3P54108 245 aa4.36□□□□□ -1.71
SPG11-208ENST00000558155 LOXL3P58215 753 aa4.36□□□□□ -1.71
SPG11-208ENST00000558155 ERVS71-1P61550 626 aa4.36□□□□□ -1.71
SPG11-208ENST00000558155 HSF2Q03933 536 aa4.36□□□□□ -1.71
SPG11-208ENST00000558155 GLO1Q04760 184 aa4.36□□□□□ -1.71
SPG11-208ENST00000558155 LRRC74AQ0VAA2 488 aa4.36□□□□□ -1.71
SPG11-208ENST00000558155 PCLAFQ15004 111 aa4.36□□□□□ -1.71
SPG11-208ENST00000558155 C2orf68Q2NKX9 166 aa4.36□□□□□ -1.71
SPG11-208ENST00000558155 DEFB112Q30KQ8 113 aa4.36□□□□□ -1.71
SPG11-208ENST00000558155 HSP90B2PQ58FF3 399 aa4.36□□□□□ -1.71
SPG11-208ENST00000558155 TTMPQ5BVD1 217 aa4.36□□□□□ -1.71
SPG11-208ENST00000558155 ZMAT1Q5H9K5 638 aa4.36□□□□□ -1.71
SPG11-208ENST00000558155 THEM4Q5T1C6 240 aa4.36□□□□□ -1.71
SPG11-208ENST00000558155 RNF220Q5VTB9 566 aa4.36□□□□□ -1.71
SPG11-208ENST00000558155 C6orf89Q6UWU4 347 aa4.36□□□□□ -1.71
SPG11-208ENST00000558155 Q6YL49 198 aa4.36□□□□□ -1.71
SPG11-208ENST00000558155 ZNF620Q6ZNG0 422 aa4.36□□□□□ -1.71
SPG11-208ENST00000558155 SLC16A14Q7RTX9 510 aa4.36□□□□□ -1.71
SPG11-208ENST00000558155 PXKQ7Z7A4 578 aa4.36□□□□□ -1.71
SPG11-208ENST00000558155 ZER1Q7Z7L7 766 aa4.36□□□□□ -1.71
SPG11-208ENST00000558155 LSRQ86X29 649 aaPredicted RBP4.36□□□□□ -1.71
SPG11-208ENST00000558155 MUC20Q8N307 709 aaPredicted RBP4.36□□□□□ -1.71
SPG11-208ENST00000558155 PAQR4Q8N4S7 273 aaPredicted RBP4.36□□□□□ -1.71
SPG11-208ENST00000558155 SCAIQ8N9R8 606 aa4.36□□□□□ -1.71
SPG11-208ENST00000558155 HIPK4Q8NE63 616 aa4.36□□□□□ -1.71
SPG11-208ENST00000558155 OR10S1Q8NGN2 331 aa4.36□□□□□ -1.71
SPG11-208ENST00000558155 OR6S1Q8NH40 331 aa4.36□□□□□ -1.71
SPG11-208ENST00000558155 FGFBP3Q8TAT2 258 aa4.36□□□□□ -1.71
SPG11-208ENST00000558155 TBC1D15Q8TC07 691 aa4.36□□□□□ -1.71
SPG11-208ENST00000558155 DNAJA4Q8WW22 397 aaPredicted RBP4.36□□□□□ -1.71
SPG11-208ENST00000558155 RAB40AQ8WXH6 277 aa4.36□□□□□ -1.71
SPG11-208ENST00000558155 TESCQ96BS2 214 aa4.36□□□□□ -1.71
SPG11-208ENST00000558155 UPRTQ96BW1 309 aa4.36□□□□□ -1.71
SPG11-208ENST00000558155 THOC1Q96FV9 657 aaKnown RBP4.36□□□□□ -1.71
SPG11-208ENST00000558155 PLEKHA8Q96JA3 519 aa4.36□□□□□ -1.71
SPG11-208ENST00000558155 SAMD8Q96LT4 415 aa4.36□□□□□ -1.71
SPG11-208ENST00000558155 PANX1Q96RD7 426 aa4.36□□□□□ -1.71
SPG11-208ENST00000558155 EPYCQ99645 322 aa4.36□□□□□ -1.71
SPG11-208ENST00000558155 SH3GL3Q99963 347 aa4.36□□□□□ -1.71
SPG11-208ENST00000558155 NPHS2Q9NP85 383 aa4.36□□□□□ -1.71
SPG11-208ENST00000558155 A4GALTQ9NPC4 353 aa4.36□□□□□ -1.71
SPG11-208ENST00000558155 TCF7L2Q9NQB0 619 aa4.36□□□□□ -1.71
SPG11-208ENST00000558155 TNFRSF19Q9NS68 423 aa4.36□□□□□ -1.71
SPG11-208ENST00000558155 SLC6A13Q9NSD5 602 aa4.36□□□□□ -1.71
SPG11-208ENST00000558155 TMEM106BQ9NUM4 274 aa4.36□□□□□ -1.71
SPG11-208ENST00000558155 GLTPQ9NZD2 209 aa4.36□□□□□ -1.71
SPG11-208ENST00000558155 ASH2LQ9UBL3 628 aa4.36□□□□□ -1.71
SPG11-208ENST00000558155 P2RX2Q9UBL9 471 aa4.36□□□□□ -1.71
SPG11-208ENST00000558155 CGGBP1Q9UFW8 167 aaPredicted RBP4.36□□□□□ -1.71
SPG11-208ENST00000558155 BTNL2Q9UIR0 455 aa4.36□□□□□ -1.71
SPG11-208ENST00000558155 ZNF443Q9Y2A4 671 aaPredicted RBP4.36□□□□□ -1.71
SPG11-208ENST00000558155 LRCH1Q9Y2L9 728 aa4.36□□□□□ -1.71
SPG11-208ENST00000558155 SOX21Q9Y651 276 aaPredicted RBP4.36□□□□□ -1.71
SPG11-208ENST00000558155 POMT1Q9Y6A1 747 aa4.36□□□□□ -1.71
SPG11-208ENST00000558155 KIR2DS1A0A191URI9 304 aa4.35□□□□□ -1.71
SPG11-208ENST00000558155 PLPP3O14495 311 aa4.35□□□□□ -1.71
SPG11-208ENST00000558155 SURF4O15260 269 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms