RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 CCNIQ14094 377 aa11.68□□□□□ -0.54
SNRPA1-204ENST00000558020 SELPLGQ14242 412 aa11.68□□□□□ -0.54
SNRPA1-204ENST00000558020 TRIP10Q15642 601 aa11.68□□□□□ -0.54
SNRPA1-204ENST00000558020 ELFN2Q5R3F8 820 aa11.68□□□□□ -0.54
SNRPA1-204ENST00000558020 NANOGP8Q6NSW7 305 aa11.68□□□□□ -0.54
SNRPA1-204ENST00000558020 ERICH5Q6P6B1 374 aa11.68□□□□□ -0.54
SNRPA1-204ENST00000558020 LRP11Q86VZ4 500 aa11.68□□□□□ -0.54
SNRPA1-204ENST00000558020 ZNF584Q8IVC4 421 aa11.68□□□□□ -0.54
SNRPA1-204ENST00000558020 WDFY1Q8IWB7 410 aa11.68□□□□□ -0.54
SNRPA1-204ENST00000558020 TEX29Q8N6K0 151 aa11.68□□□□□ -0.54
SNRPA1-204ENST00000558020 RBM15BQ8NDT2 890 aaKnown RBP11.68□□□□□ -0.54
SNRPA1-204ENST00000558020 MCHR2Q969V1 340 aa11.68□□□□□ -0.54
SNRPA1-204ENST00000558020 VIPAS39Q9H9C1 493 aa11.68□□□□□ -0.54
SNRPA1-204ENST00000558020 HINT3Q9NQE9 182 aaKnown RBP11.68□□□□□ -0.54
SNRPA1-204ENST00000558020 INIPQ9NRY2 104 aa11.68□□□□□ -0.54
SNRPA1-204ENST00000558020 ARGLU1Q9NWB6 273 aaPredicted RBP11.68□□□□□ -0.54
SNRPA1-204ENST00000558020 TAAR3PQ9P1P4 343 aa11.68□□□□□ -0.54
SNRPA1-204ENST00000558020 RIMS3Q9UJD0 308 aa11.68□□□□□ -0.54
SNRPA1-204ENST00000558020 FZR1Q9UM11 496 aa11.68□□□□□ -0.54
SNRPA1-204ENST00000558020 GRIP1Q9Y3R0 1128 aa11.68□□□□□ -0.54
SNRPA1-204ENST00000558020 SVEP1Q4LDE5 3571 aa11.68□□□□□ -0.54
SNRPA1-204ENST00000558020 GMNCA6NCL1 334 aa11.67□□□□□ -0.54
SNRPA1-204ENST00000558020 HAX1O00165 279 aa11.67□□□□□ -0.54
SNRPA1-204ENST00000558020 EDF1O60869 148 aaKnown RBP11.67□□□□□ -0.54
SNRPA1-204ENST00000558020 OR5F1O95221 314 aa11.67□□□□□ -0.54
SNRPA1-204ENST00000558020 THY1P04216 161 aa11.67□□□□□ -0.54
SNRPA1-204ENST00000558020 FAM157BP0CG42 384 aa11.67□□□□□ -0.54
SNRPA1-204ENST00000558020 SAGP10523 405 aaPredicted RBP11.67□□□□□ -0.54
SNRPA1-204ENST00000558020 THRBP10828 461 aa11.67□□□□□ -0.54
SNRPA1-204ENST00000558020 ZNF250P15622 560 aa11.67□□□□□ -0.54
SNRPA1-204ENST00000558020 ACADSP16219 412 aa11.67□□□□□ -0.54
SNRPA1-204ENST00000558020 APLNRP35414 380 aa11.67□□□□□ -0.54
SNRPA1-204ENST00000558020 HSF2Q03933 536 aa11.67□□□□□ -0.54
SNRPA1-204ENST00000558020 MELKQ14680 651 aa11.67□□□□□ -0.54
SNRPA1-204ENST00000558020 MAD2L1BPQ15013 274 aaPredicted RBP11.67□□□□□ -0.54
SNRPA1-204ENST00000558020 HIST3H3Q16695 136 aa11.67□□□□□ -0.54
SNRPA1-204ENST00000558020 MSMPQ1L6U9 139 aa11.67□□□□□ -0.54
SNRPA1-204ENST00000558020 CARM1Q86X55 608 aa11.67□□□□□ -0.54
SNRPA1-204ENST00000558020 C1orf174Q8IYL3 243 aa11.67□□□□□ -0.54
SNRPA1-204ENST00000558020 SYT14Q8NB59 555 aa11.67□□□□□ -0.54
SNRPA1-204ENST00000558020 OR8J3Q8NGG0 315 aa11.67□□□□□ -0.54
SNRPA1-204ENST00000558020 OR4D11Q8NGI4 311 aa11.67□□□□□ -0.54
SNRPA1-204ENST00000558020 FGFBP3Q8TAT2 258 aa11.67□□□□□ -0.54
SNRPA1-204ENST00000558020 LRRC58Q96CX6 371 aa11.67□□□□□ -0.54
SNRPA1-204ENST00000558020 SGTBQ96EQ0 304 aa11.67□□□□□ -0.54
SNRPA1-204ENST00000558020 PRSS27Q9BQR3 290 aa11.67□□□□□ -0.54
SNRPA1-204ENST00000558020 MRPL13Q9BYD1 178 aaKnown RBP11.67□□□□□ -0.54
SNRPA1-204ENST00000558020 SIAEQ9HAT2 523 aa11.67□□□□□ -0.54
SNRPA1-204ENST00000558020 SMURF2Q9HAU4 748 aa11.67□□□□□ -0.54
SNRPA1-204ENST00000558020 CCNB1IP1Q9NPC3 277 aa11.67□□□□□ -0.54
SNRPA1-204ENST00000558020 MEPEQ9NQ76 525 aaPredicted RBP11.67□□□□□ -0.54
SNRPA1-204ENST00000558020 NKIRAS2Q9NYR9 191 aa11.67□□□□□ -0.54
SNRPA1-204ENST00000558020 EIF3KQ9UBQ5 218 aaKnown RBP11.67□□□□□ -0.54
SNRPA1-204ENST00000558020 MED31Q9Y3C7 131 aa11.67□□□□□ -0.54
SNRPA1-204ENST00000558020 A0A0A6YYJ9 748 aa11.66□□□□□ -0.54
SNRPA1-204ENST00000558020 C17orf100A8MU93 164 aa11.66□□□□□ -0.54
SNRPA1-204ENST00000558020 TPD52L2O43399 206 aaKnown RBP11.66□□□□□ -0.54
SNRPA1-204ENST00000558020 OR7A10O76100 309 aa11.66□□□□□ -0.54
SNRPA1-204ENST00000558020 F13BP05160 661 aa11.66□□□□□ -0.54
SNRPA1-204ENST00000558020 MSMBP08118 114 aa11.66□□□□□ -0.54
SNRPA1-204ENST00000558020 MYBPC1Q00872 1141 aa11.66□□□□□ -0.54
SNRPA1-204ENST00000558020 RPL18Q07020 188 aaKnown RBP11.66□□□□□ -0.54
SNRPA1-204ENST00000558020 TAF11Q15544 211 aa11.66□□□□□ -0.54
SNRPA1-204ENST00000558020 MAPRE2Q15555 327 aa11.66□□□□□ -0.54
SNRPA1-204ENST00000558020 COQ5Q5HYK3 327 aa11.66□□□□□ -0.54
SNRPA1-204ENST00000558020 SHQ1Q6PI26 577 aaKnown RBP11.66□□□□□ -0.54
SNRPA1-204ENST00000558020 ALDH16A1Q8IZ83 802 aa11.66□□□□□ -0.54
SNRPA1-204ENST00000558020 LRRC18Q8N456 261 aa11.66□□□□□ -0.54
SNRPA1-204ENST00000558020 PCYOX1LQ8NBM8 494 aa11.66□□□□□ -0.54
SNRPA1-204ENST00000558020 OR51F2Q8NH61 342 aa11.66□□□□□ -0.54
SNRPA1-204ENST00000558020 FNDC8Q8TC99 324 aa11.66□□□□□ -0.54
SNRPA1-204ENST00000558020 TMEM239Q8WW34 195 aa11.66□□□□□ -0.54
SNRPA1-204ENST00000558020 TMEM186Q96B77 213 aa11.66□□□□□ -0.54
SNRPA1-204ENST00000558020 RBP7Q96R05 134 aa11.66□□□□□ -0.54
SNRPA1-204ENST00000558020 ZNF347Q96SE7 839 aa11.66□□□□□ -0.54
SNRPA1-204ENST00000558020 OCEL1Q9H607 264 aa11.66□□□□□ -0.54
SNRPA1-204ENST00000558020 ZNF275Q9NSD4 429 aaPredicted RBP11.66□□□□□ -0.54
SNRPA1-204ENST00000558020 DECR2Q9NUI1 292 aa11.66□□□□□ -0.54
SNRPA1-204ENST00000558020 HIF1ANQ9NWT6 349 aa11.66□□□□□ -0.54
SNRPA1-204ENST00000558020 GID8Q9NWU2 228 aa11.66□□□□□ -0.54
SNRPA1-204ENST00000558020 MYEF2Q9P2K5 600 aaKnown RBP11.66□□□□□ -0.54
SNRPA1-204ENST00000558020 IGLV3-9A0A075B6K5 115 aa11.65□□□□□ -0.54
SNRPA1-204ENST00000558020 TRAV20A0A0B4J274 112 aa11.65□□□□□ -0.54
SNRPA1-204ENST00000558020 NPIPB13A6NJU9 1138 aa11.65□□□□□ -0.54
SNRPA1-204ENST00000558020 BBIP1A8MTZ0 92 aa11.65□□□□□ -0.54
SNRPA1-204ENST00000558020 NPIPB4C9JG80 1138 aa11.65□□□□□ -0.54
SNRPA1-204ENST00000558020 TRMUO75648 421 aaKnown RBP11.65□□□□□ -0.54
SNRPA1-204ENST00000558020 TROVE2P10155 538 aaKnown RBP eCLIP11.65□□□□□ -0.54
SNRPA1-204ENST00000558020 CCL2P13500 99 aa11.65□□□□□ -0.54
SNRPA1-204ENST00000558020 CCNOP22674 350 aa11.65□□□□□ -0.54
SNRPA1-204ENST00000558020 AQP2P41181 271 aa11.65□□□□□ -0.54
SNRPA1-204ENST00000558020 GZMMP51124 257 aa11.65□□□□□ -0.54
SNRPA1-204ENST00000558020 UGT2B15P54855 530 aa11.65□□□□□ -0.54
SNRPA1-204ENST00000558020 CCL8P80075 99 aa11.65□□□□□ -0.54
SNRPA1-204ENST00000558020 MRPS34P82930 218 aaKnown RBP11.65□□□□□ -0.54
SNRPA1-204ENST00000558020 FAM209AQ5JX71 171 aa11.65□□□□□ -0.54
SNRPA1-204ENST00000558020 C10orf128Q5T292 105 aa11.65□□□□□ -0.54
SNRPA1-204ENST00000558020 DEF8Q6ZN54 512 aa11.65□□□□□ -0.54
SNRPA1-204ENST00000558020 RINLQ6ZS11 566 aa11.65□□□□□ -0.54
SNRPA1-204ENST00000558020 ICA1LQ8NDH6 482 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms