RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 H3BNX3 289 aa12.52□□□□□ -0.41
USP3-205ENST00000557884 ENTPD5O75356 428 aa12.52□□□□□ -0.41
USP3-205ENST00000557884 GOSR1O95249 250 aa12.52□□□□□ -0.41
USP3-205ENST00000557884 TXNDC12O95881 172 aa12.52□□□□□ -0.41
USP3-205ENST00000557884 PLAUP00749 431 aa12.52□□□□□ -0.41
USP3-205ENST00000557884 HLA-HP01893 362 aa12.52□□□□□ -0.41
USP3-205ENST00000557884 PATE4P0C8F1 98 aa12.52□□□□□ -0.41
USP3-205ENST00000557884 NR2C1P13056 603 aa12.52□□□□□ -0.41
USP3-205ENST00000557884 POU1F1P28069 291 aa12.52□□□□□ -0.41
USP3-205ENST00000557884 NOS3P29474 1203 aa12.52□□□□□ -0.41
USP3-205ENST00000557884 CDKN2AP42771 156 aaKnown RBP12.52□□□□□ -0.41
USP3-205ENST00000557884 ARHGDIAP52565 204 aa12.52□□□□□ -0.41
USP3-205ENST00000557884 NR1H2P55055 460 aa12.52□□□□□ -0.41
USP3-205ENST00000557884 PIGFQ07326 219 aa12.52□□□□□ -0.41
USP3-205ENST00000557884 DBPQ10586 325 aaPredicted RBP12.52□□□□□ -0.41
USP3-205ENST00000557884 SLC36A3Q495N2 470 aa12.52□□□□□ -0.41
USP3-205ENST00000557884 THEM4Q5T1C6 240 aa12.52□□□□□ -0.41
USP3-205ENST00000557884 NCMAPQ5T1S8 102 aa12.52□□□□□ -0.41
USP3-205ENST00000557884 C10orf128Q5T292 105 aa12.52□□□□□ -0.41
USP3-205ENST00000557884 RPL13AP3Q6NVV1 102 aa12.52□□□□□ -0.41
USP3-205ENST00000557884 LEG1Q6P5S2 330 aa12.52□□□□□ -0.41
USP3-205ENST00000557884 SLC25A47Q6Q0C1 308 aa12.52□□□□□ -0.41
USP3-205ENST00000557884 KLHL17Q6TDP4 642 aa12.52□□□□□ -0.41
USP3-205ENST00000557884 MDP1Q86V88 176 aa12.52□□□□□ -0.41
USP3-205ENST00000557884 JAZF1Q86VZ6 243 aa12.52□□□□□ -0.41
USP3-205ENST00000557884 SLC22A24Q8N4F4 322 aa12.52□□□□□ -0.41
USP3-205ENST00000557884 IQCF1Q8N6M8 205 aa12.52□□□□□ -0.41
USP3-205ENST00000557884 OR4K13Q8NH42 304 aa12.52□□□□□ -0.41
USP3-205ENST00000557884 OR5K1Q8NHB7 308 aa12.52□□□□□ -0.41
USP3-205ENST00000557884 BOD1Q96IK1 185 aa12.52□□□□□ -0.41
USP3-205ENST00000557884 LURAP1Q96LR2 239 aa12.52□□□□□ -0.41
USP3-205ENST00000557884 FOXN4Q96NZ1 517 aa12.52□□□□□ -0.41
USP3-205ENST00000557884 SH3GL3Q99963 347 aa12.52□□□□□ -0.41
USP3-205ENST00000557884 BDH2Q9BUT1 245 aa12.52□□□□□ -0.41
USP3-205ENST00000557884 SYT4Q9H2B2 425 aa12.52□□□□□ -0.41
USP3-205ENST00000557884 RERGLQ9H628 205 aa12.52□□□□□ -0.41
USP3-205ENST00000557884 ESRP2Q9H6T0 727 aaKnown RBP12.52□□□□□ -0.41
USP3-205ENST00000557884 ZNF556Q9HAH1 456 aa12.52□□□□□ -0.41
USP3-205ENST00000557884 OBP2BQ9NPH6 170 aa12.52□□□□□ -0.41
USP3-205ENST00000557884 IL20Q9NYY1 176 aa12.52□□□□□ -0.41
USP3-205ENST00000557884 KIF17Q9P2E2 1029 aa12.52□□□□□ -0.41
USP3-205ENST00000557884 UGT2A1Q9Y4X1 527 aa12.52□□□□□ -0.41
USP3-205ENST00000557884 TEX15Q9BXT5 2789 aa12.51□□□□□ -0.41
USP3-205ENST00000557884 A0A1W2PPL8 197 aa12.51□□□□□ -0.41
USP3-205ENST00000557884 ERICH4A6NGS2 130 aa12.51□□□□□ -0.41
USP3-205ENST00000557884 SAC3D1A6NKF1 404 aa12.51□□□□□ -0.41
USP3-205ENST00000557884 H3BN98 237 aa12.51□□□□□ -0.41
USP3-205ENST00000557884 TP53P04637 393 aaPredicted RBP12.51□□□□□ -0.41
USP3-205ENST00000557884 CD3EP07766 207 aa12.51□□□□□ -0.41
USP3-205ENST00000557884 APEHP13798 732 aaKnown RBP12.51□□□□□ -0.41
USP3-205ENST00000557884 HIST1H1CP16403 213 aaKnown RBP12.51□□□□□ -0.41
USP3-205ENST00000557884 ZNF23P17027 643 aa12.51□□□□□ -0.41
USP3-205ENST00000557884 ZNF133P52736 654 aaPredicted RBP12.51□□□□□ -0.41
USP3-205ENST00000557884 SPOCK1Q08629 439 aa12.51□□□□□ -0.41
USP3-205ENST00000557884 COX10Q12887 443 aa12.51□□□□□ -0.41
USP3-205ENST00000557884 ETFDHQ16134 617 aa12.51□□□□□ -0.41
USP3-205ENST00000557884 SGCAQ16586 387 aa12.51□□□□□ -0.41
USP3-205ENST00000557884 ADAM5Q6NVV9 412 aa12.51□□□□□ -0.41
USP3-205ENST00000557884 ZFP1Q6P2D0 407 aa12.51□□□□□ -0.41
USP3-205ENST00000557884 CD300LDQ6UXZ3 194 aa12.51□□□□□ -0.41
USP3-205ENST00000557884 ZNF704Q6ZNC4 412 aaPredicted RBP12.51□□□□□ -0.41
USP3-205ENST00000557884 ZNF627Q7L945 461 aa12.51□□□□□ -0.41
USP3-205ENST00000557884 SSX8Q7RTT4 187 aa12.51□□□□□ -0.41
USP3-205ENST00000557884 ADCK1Q86TW2 530 aa12.51□□□□□ -0.41
USP3-205ENST00000557884 SKA3Q8IX90 412 aa12.51□□□□□ -0.41
USP3-205ENST00000557884 SDR9C7Q8NEX9 313 aa12.51□□□□□ -0.41
USP3-205ENST00000557884 OR4Q3Q8NH05 313 aa12.51□□□□□ -0.41
USP3-205ENST00000557884 NRBF2Q96F24 287 aa12.51□□□□□ -0.41
USP3-205ENST00000557884 NMNAT3Q96T66 252 aa12.51□□□□□ -0.41
USP3-205ENST00000557884 PKP2Q99959 881 aa12.51□□□□□ -0.41
USP3-205ENST00000557884 SEC61A2Q9H9S3 476 aa12.51□□□□□ -0.41
USP3-205ENST00000557884 UBTD1Q9HAC8 227 aa12.51□□□□□ -0.41
USP3-205ENST00000557884 SMURF2Q9HAU4 748 aa12.51□□□□□ -0.41
USP3-205ENST00000557884 NOX3Q9HBY0 568 aa12.51□□□□□ -0.41
USP3-205ENST00000557884 VSX1Q9NZR4 365 aaPredicted RBP12.51□□□□□ -0.41
USP3-205ENST00000557884 RNF115Q9Y4L5 304 aa12.51□□□□□ -0.41
USP3-205ENST00000557884 AKAP9Q99996 3911 aa12.51□□□□□ -0.41
USP3-205ENST00000557884 G3V2T6 193 aa12.5□□□□□ -0.41
USP3-205ENST00000557884 BHLHE40O14503 412 aa12.5□□□□□ -0.41
USP3-205ENST00000557884 ABCD4O14678 606 aa12.5□□□□□ -0.41
USP3-205ENST00000557884 ARPC3O15145 178 aa12.5□□□□□ -0.41
USP3-205ENST00000557884 SLC16A7O60669 478 aa12.5□□□□□ -0.41
USP3-205ENST00000557884 CELA3BP08861 270 aa12.5□□□□□ -0.41
USP3-205ENST00000557884 OR8G3PP0DMU2 310 aa12.5□□□□□ -0.41
USP3-205ENST00000557884 ANXA8P13928 327 aa12.5□□□□□ -0.41
USP3-205ENST00000557884 HOXB1P14653 301 aaPredicted RBP12.5□□□□□ -0.41
USP3-205ENST00000557884 CTLA4P16410 223 aa12.5□□□□□ -0.41
USP3-205ENST00000557884 CD40P25942 277 aa12.5□□□□□ -0.41
USP3-205ENST00000557884 DAPP51397 102 aa12.5□□□□□ -0.41
USP3-205ENST00000557884 IDH3GP51553 393 aaPredicted RBP12.5□□□□□ -0.41
USP3-205ENST00000557884 NPRL3Q12980 569 aa12.5□□□□□ -0.41
USP3-205ENST00000557884 OTPQ5XKR4 325 aa12.5□□□□□ -0.41
USP3-205ENST00000557884 TMEM108Q6UXF1 575 aa12.5□□□□□ -0.41
USP3-205ENST00000557884 HIPK1Q86Z02 1210 aa12.5□□□□□ -0.41
USP3-205ENST00000557884 LRRC18Q8N456 261 aa12.5□□□□□ -0.41
USP3-205ENST00000557884 ICA1LQ8NDH6 482 aa12.5□□□□□ -0.41
USP3-205ENST00000557884 KBTBD8Q8NFY9 601 aa12.5□□□□□ -0.41
USP3-205ENST00000557884 OR2T33Q8NG76 320 aa12.5□□□□□ -0.41
USP3-205ENST00000557884 OR52E2Q8NGJ4 325 aa12.5□□□□□ -0.41
USP3-205ENST00000557884 FGFBP3Q8TAT2 258 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms