RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 FABP5Q01469 135 aa11.14□□□□□ -0.63
SHMT2-233ENST00000557529 RSPO4Q2I0M5 234 aaPredicted RBP11.14□□□□□ -0.63
SHMT2-233ENST00000557529 ZNF404Q494X3 552 aa11.14□□□□□ -0.63
SHMT2-233ENST00000557529 ZNF684Q5T5D7 378 aa11.14□□□□□ -0.63
SHMT2-233ENST00000557529 DMKNQ6E0U4 476 aaPredicted RBP11.14□□□□□ -0.63
SHMT2-233ENST00000557529 C22orf42Q6IC83 251 aa11.14□□□□□ -0.63
SHMT2-233ENST00000557529 SLC18B1Q6NT16 456 aa11.14□□□□□ -0.63
SHMT2-233ENST00000557529 DPY19L4Q7Z388 723 aa11.14□□□□□ -0.63
SHMT2-233ENST00000557529 GALNTL5Q7Z4T8 443 aa11.14□□□□□ -0.63
SHMT2-233ENST00000557529 GGNQ86UU5 652 aa11.14□□□□□ -0.63
SHMT2-233ENST00000557529 SLC22A16Q86VW1 577 aa11.14□□□□□ -0.63
SHMT2-233ENST00000557529 MS4A15Q8N5U1 240 aa11.14□□□□□ -0.63
SHMT2-233ENST00000557529 MCFD2Q8NI22 146 aa11.14□□□□□ -0.63
SHMT2-233ENST00000557529 TRMT61AQ96FX7 289 aaKnown RBP11.14□□□□□ -0.63
SHMT2-233ENST00000557529 SCMH1Q96GD3 660 aa11.14□□□□□ -0.63
SHMT2-233ENST00000557529 TM9SF2Q99805 663 aa11.14□□□□□ -0.63
SHMT2-233ENST00000557529 TTYH2Q9BSA4 534 aa11.14□□□□□ -0.63
SHMT2-233ENST00000557529 MED18Q9BUE0 208 aa11.14□□□□□ -0.63
SHMT2-233ENST00000557529 EMC6Q9BV81 110 aa11.14□□□□□ -0.63
SHMT2-233ENST00000557529 MFRPQ9BY79 579 aa11.14□□□□□ -0.63
SHMT2-233ENST00000557529 TTTY10Q9BZA0 68 aa11.14□□□□□ -0.63
SHMT2-233ENST00000557529 KCNN2Q9H2S1 579 aa11.14□□□□□ -0.63
SHMT2-233ENST00000557529 MMP27Q9H306 513 aa11.14□□□□□ -0.63
SHMT2-233ENST00000557529 KLHL9Q9P2J3 617 aa11.14□□□□□ -0.63
SHMT2-233ENST00000557529 ST6GALNAC2Q9UJ37 374 aa11.14□□□□□ -0.63
SHMT2-233ENST00000557529 COA3Q9Y2R0 106 aaPredicted RBP11.14□□□□□ -0.63
SHMT2-233ENST00000557529 SIRT4Q9Y6E7 314 aaPredicted RBP11.14□□□□□ -0.63
SHMT2-233ENST00000557529 ACOT7O00154 380 aa11.13□□□□□ -0.63
SHMT2-233ENST00000557529 ZNF593O00488 134 aaPredicted RBP11.13□□□□□ -0.63
SHMT2-233ENST00000557529 GABRPO00591 440 aa11.13□□□□□ -0.63
SHMT2-233ENST00000557529 GPRIN2O60269 458 aa11.13□□□□□ -0.63
SHMT2-233ENST00000557529 RAMP1O60894 148 aa11.13□□□□□ -0.63
SHMT2-233ENST00000557529 SERPINA3P01011 423 aa11.13□□□□□ -0.63
SHMT2-233ENST00000557529 PGA4P0DJD7 388 aa11.13□□□□□ -0.63
SHMT2-233ENST00000557529 PGA3P0DJD8 388 aa11.13□□□□□ -0.63
SHMT2-233ENST00000557529 ZNF823P16415 610 aa11.13□□□□□ -0.63
SHMT2-233ENST00000557529 CLDN20P56880 219 aa11.13□□□□□ -0.63
SHMT2-233ENST00000557529 ADAM8P78325 824 aa11.13□□□□□ -0.63
SHMT2-233ENST00000557529 FMODQ06828 376 aa11.13□□□□□ -0.63
SHMT2-233ENST00000557529 CDK5R1Q15078 307 aa11.13□□□□□ -0.63
SHMT2-233ENST00000557529 ETFDHQ16134 617 aa11.13□□□□□ -0.63
SHMT2-233ENST00000557529 ZNF766Q5HY98 468 aa11.13□□□□□ -0.63
SHMT2-233ENST00000557529 TEX30Q5JUR7 227 aa11.13□□□□□ -0.63
SHMT2-233ENST00000557529 IGFL2Q6UWQ7 119 aa11.13□□□□□ -0.63
SHMT2-233ENST00000557529 CREB3L2Q70SY1 520 aa11.13□□□□□ -0.63
SHMT2-233ENST00000557529 GLB1L2Q8IW92 636 aa11.13□□□□□ -0.63
SHMT2-233ENST00000557529 TMEM251Q8N6I4 163 aa11.13□□□□□ -0.63
SHMT2-233ENST00000557529 ZFP62Q8NB50 900 aaPredicted RBP11.13□□□□□ -0.63
SHMT2-233ENST00000557529 SLC26A10Q8NG04 563 aa11.13□□□□□ -0.63
SHMT2-233ENST00000557529 OR9K2Q8NGE7 335 aa11.13□□□□□ -0.63
SHMT2-233ENST00000557529 THEM6Q8WUY1 208 aa11.13□□□□□ -0.63
SHMT2-233ENST00000557529 SMIM19Q96E16 107 aa11.13□□□□□ -0.63
SHMT2-233ENST00000557529 ADGRG7Q96K78 797 aa11.13□□□□□ -0.63
SHMT2-233ENST00000557529 SRXN1Q9BYN0 137 aa11.13□□□□□ -0.63
SHMT2-233ENST00000557529 MRPL22Q9NWU5 206 aaKnown RBP11.13□□□□□ -0.63
SHMT2-233ENST00000557529 GALNT8Q9NY28 637 aa11.13□□□□□ -0.63
SHMT2-233ENST00000557529 KLHDC2Q9Y2U9 406 aa11.13□□□□□ -0.63
SHMT2-233ENST00000557529 PMF1-BGLAPU3KQ54 211 aa11.13□□□□□ -0.63
SHMT2-233ENST00000557529 CEP250Q9BV73 2442 aa11.13□□□□□ -0.63
SHMT2-233ENST00000557529 FAM166BA8MTA8 275 aa11.12□□□□□ -0.63
SHMT2-233ENST00000557529 SMAD9O15198 467 aaKnown RBP11.12□□□□□ -0.63
SHMT2-233ENST00000557529 TMCC2O75069 709 aa11.12□□□□□ -0.63
SHMT2-233ENST00000557529 AQP8O94778 261 aa11.12□□□□□ -0.63
SHMT2-233ENST00000557529 SPARCP09486 303 aa11.12□□□□□ -0.63
SHMT2-233ENST00000557529 EDNRAP25101 427 aa11.12□□□□□ -0.63
SHMT2-233ENST00000557529 GDI2P50395 445 aaKnown RBP11.12□□□□□ -0.63
SHMT2-233ENST00000557529 TNFSF10P50591 281 aa11.12□□□□□ -0.63
SHMT2-233ENST00000557529 RORCP51449 518 aa11.12□□□□□ -0.63
SHMT2-233ENST00000557529 CLDN17P56750 224 aa11.12□□□□□ -0.63
SHMT2-233ENST00000557529 PPIAP62937 165 aaKnown RBP11.12□□□□□ -0.63
SHMT2-233ENST00000557529 SLC3A1Q07837 685 aa11.12□□□□□ -0.63
SHMT2-233ENST00000557529 CAMK2DQ13557 499 aa11.12□□□□□ -0.63
SHMT2-233ENST00000557529 SLC17A1Q14916 467 aa11.12□□□□□ -0.63
SHMT2-233ENST00000557529 HIST3H3Q16695 136 aa11.12□□□□□ -0.63
SHMT2-233ENST00000557529 DEFB109BQ30KR1 87 aa11.12□□□□□ -0.63
SHMT2-233ENST00000557529 KCTD18Q6PI47 426 aaPredicted RBP11.12□□□□□ -0.63
SHMT2-233ENST00000557529 PAMR1Q6UXH9 720 aa11.12□□□□□ -0.63
SHMT2-233ENST00000557529 UBQLNLQ8IYU4 475 aa11.12□□□□□ -0.63
SHMT2-233ENST00000557529 FAM109AQ8N4B1 249 aa11.12□□□□□ -0.63
SHMT2-233ENST00000557529 YIPF7Q8N8F6 280 aa11.12□□□□□ -0.63
SHMT2-233ENST00000557529 FDCSPQ8NFU4 85 aa11.12□□□□□ -0.63
SHMT2-233ENST00000557529 OR6Q1Q8NGQ2 317 aa11.12□□□□□ -0.63
SHMT2-233ENST00000557529 OR10D3Q8NH80 312 aa11.12□□□□□ -0.63
SHMT2-233ENST00000557529 S100ZQ8WXG8 99 aa11.12□□□□□ -0.63
SHMT2-233ENST00000557529 CPNE4Q96A23 557 aaPredicted RBP11.12□□□□□ -0.63
SHMT2-233ENST00000557529 PNPLA2Q96AD5 504 aa11.12□□□□□ -0.63
SHMT2-233ENST00000557529 INTS12Q96CB8 462 aaKnown RBP11.12□□□□□ -0.63
SHMT2-233ENST00000557529 HDHD5Q9BXW7 423 aa11.12□□□□□ -0.63
SHMT2-233ENST00000557529 NXF2Q9GZY0 626 aaKnown RBP11.12□□□□□ -0.63
SHMT2-233ENST00000557529 ACKR4Q9NPB9 350 aa11.12□□□□□ -0.63
SHMT2-233ENST00000557529 ACOXLQ9NUZ1 547 aa11.12□□□□□ -0.63
SHMT2-233ENST00000557529 MRM2Q9UI43 246 aaKnown RBP11.12□□□□□ -0.63
SHMT2-233ENST00000557529 IKZF2Q9UKS7 526 aa11.12□□□□□ -0.63
SHMT2-233ENST00000557529 MED13Q9UHV7 2174 aa11.11□□□□□ -0.63
SHMT2-233ENST00000557529 A0A075B6Q4 140 aa11.11□□□□□ -0.63
SHMT2-233ENST00000557529 TRBV2A0A0J9YWF9 115 aa11.11□□□□□ -0.63
SHMT2-233ENST00000557529 DCDC2BA2VCK2 349 aa11.11□□□□□ -0.63
SHMT2-233ENST00000557529 MAGEB4O15481 346 aaPredicted RBP11.11□□□□□ -0.63
SHMT2-233ENST00000557529 CXCL13O43927 109 aa11.11□□□□□ -0.63
SHMT2-233ENST00000557529 CEACAM4O75871 244 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms