RNA–Protein interactions for RNA: ENST00000557487.5

SHMT2-232, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 1,918 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-232ENST00000557487 DCAF12L2Q5VW00 463 aa14.76□□□□□ -0.05
SHMT2-232ENST00000557487 TMEM205Q6UW68 189 aa14.76□□□□□ -0.05
SHMT2-232ENST00000557487 LSRQ86X29 649 aaPredicted RBP14.76□□□□□ -0.05
SHMT2-232ENST00000557487 GABRG1Q8N1C3 465 aa14.76□□□□□ -0.05
SHMT2-232ENST00000557487 BCORP1Q8N888 145 aa14.76□□□□□ -0.05
SHMT2-232ENST00000557487 OR51D1Q8NGF3 324 aa14.76□□□□□ -0.05
SHMT2-232ENST00000557487 ST8SIA2Q92186 375 aa14.76□□□□□ -0.05
SHMT2-232ENST00000557487 OR10H1Q9Y4A9 318 aa14.76□□□□□ -0.05
SHMT2-232ENST00000557487 HRH3Q9Y5N1 445 aa14.76□□□□□ -0.05
SHMT2-232ENST00000557487 DOCK9Q9BZ29 2069 aa14.76□□□□□ -0.05
SHMT2-232ENST00000557487 TMEM272A0A1B0GTI8 110 aa14.76□□□□□ -0.05
SHMT2-232ENST00000557487 TMEM82A0PJX8 343 aa14.76□□□□□ -0.05
SHMT2-232ENST00000557487 TMEM200CA6NKL6 621 aa14.76□□□□□ -0.05
SHMT2-232ENST00000557487 FAM171A2A8MVW0 826 aa14.76□□□□□ -0.05
SHMT2-232ENST00000557487 RDH16O75452 317 aa14.76□□□□□ -0.05
SHMT2-232ENST00000557487 CAPZA1P52907 286 aa14.76□□□□□ -0.05
SHMT2-232ENST00000557487 FAM166AQ6J272 317 aa14.76□□□□□ -0.05
SHMT2-232ENST00000557487 UQCC3Q6UW78 93 aa14.76□□□□□ -0.05
SHMT2-232ENST00000557487 TAF8Q7Z7C8 310 aa14.76□□□□□ -0.05
SHMT2-232ENST00000557487 OOSP2Q86WS3 158 aa14.76□□□□□ -0.05
SHMT2-232ENST00000557487 KCNRGQ8N5I3 272 aa14.76□□□□□ -0.05
SHMT2-232ENST00000557487 C10orf53Q8N6V4 93 aa14.76□□□□□ -0.05
SHMT2-232ENST00000557487 OR6N2Q8NGY6 317 aa14.76□□□□□ -0.05
SHMT2-232ENST00000557487 PRODH2Q9UF12 536 aa14.76□□□□□ -0.05
SHMT2-232ENST00000557487 EPHA6Q9UF33 1036 aa14.76□□□□□ -0.05
SHMT2-232ENST00000557487 GPR160Q9UJ42 338 aa14.76□□□□□ -0.05
SHMT2-232ENST00000557487 CD207Q9UJ71 328 aa14.76□□□□□ -0.05
SHMT2-232ENST00000557487 FBXL2Q9UKC9 423 aa14.76□□□□□ -0.05
SHMT2-232ENST00000557487 CHURC1-FNTBB4DL54 471 aa14.75□□□□□ -0.05
SHMT2-232ENST00000557487 LGALS8O00214 317 aa14.75□□□□□ -0.05
SHMT2-232ENST00000557487 RASGRP1O95267 797 aa14.75□□□□□ -0.05
SHMT2-232ENST00000557487 CD3DP04234 171 aa14.75□□□□□ -0.05
SHMT2-232ENST00000557487 PROS1P07225 676 aa14.75□□□□□ -0.05
SHMT2-232ENST00000557487 OR4E1P0C645 316 aa14.75□□□□□ -0.05
SHMT2-232ENST00000557487 CT45A8P0DMV1 189 aa14.75□□□□□ -0.05
SHMT2-232ENST00000557487 CT45A9P0DMV2 189 aa14.75□□□□□ -0.05
SHMT2-232ENST00000557487 KIR2DL1P43626 348 aaPredicted RBP14.75□□□□□ -0.05
SHMT2-232ENST00000557487 GPR3P46089 330 aa14.75□□□□□ -0.05
SHMT2-232ENST00000557487 LSSP48449 732 aa14.75□□□□□ -0.05
SHMT2-232ENST00000557487 DMWDQ09019 674 aa14.75□□□□□ -0.05
SHMT2-232ENST00000557487 ZNF169Q14929 603 aaPredicted RBP14.75□□□□□ -0.05
SHMT2-232ENST00000557487 C2orf76Q3KRA6 126 aa14.75□□□□□ -0.05
SHMT2-232ENST00000557487 GXYLT1Q4G148 440 aa14.75□□□□□ -0.05
SHMT2-232ENST00000557487 CT45A2Q5DJT8 189 aa14.75□□□□□ -0.05
SHMT2-232ENST00000557487 GLT8D1Q68CQ7 371 aa14.75□□□□□ -0.05
SHMT2-232ENST00000557487 LIN54Q6MZP7 749 aa14.75□□□□□ -0.05
SHMT2-232ENST00000557487 MOB3CQ70IA8 216 aa14.75□□□□□ -0.05
SHMT2-232ENST00000557487 RD3Q7Z3Z2 195 aa14.75□□□□□ -0.05
SHMT2-232ENST00000557487 ZNF546Q86UE3 836 aa14.75□□□□□ -0.05
SHMT2-232ENST00000557487 SMRP1Q8NCR6 262 aa14.75□□□□□ -0.05
SHMT2-232ENST00000557487 TSEN15Q8WW01 171 aaKnown RBP14.75□□□□□ -0.05
SHMT2-232ENST00000557487 SPACA7Q96KW9 195 aa14.75□□□□□ -0.05
SHMT2-232ENST00000557487 DGAT2Q96PD7 388 aa14.75□□□□□ -0.05
SHMT2-232ENST00000557487 ZNF416Q9BWM5 594 aa14.75□□□□□ -0.05
SHMT2-232ENST00000557487 GPR174Q9BXC1 333 aa14.75□□□□□ -0.05
SHMT2-232ENST00000557487 S1PR5Q9H228 398 aa14.75□□□□□ -0.05
SHMT2-232ENST00000557487 SRA1Q9HD15 236 aaKnown RBP14.75□□□□□ -0.05
SHMT2-232ENST00000557487 WSB2Q9NYS7 404 aaPredicted RBP14.75□□□□□ -0.05
SHMT2-232ENST00000557487 LRIT1Q9P2V4 623 aa14.75□□□□□ -0.05
SHMT2-232ENST00000557487 PLCL2Q9UPR0 1127 aa14.75□□□□□ -0.05
SHMT2-232ENST00000557487 TICRRQ7Z2Z1 1910 aa14.75□□□□□ -0.05
SHMT2-232ENST00000557487 TRBV23OR9-2A0A075B6M9 112 aa14.74□□□□□ -0.05
SHMT2-232ENST00000557487 A0A1B0GTI1 187 aa14.74□□□□□ -0.05
SHMT2-232ENST00000557487 KANTRA0A1W2PQU2 76 aa14.74□□□□□ -0.05
SHMT2-232ENST00000557487 OR5K4A6NMS3 321 aa14.74□□□□□ -0.05
SHMT2-232ENST00000557487 CLDN4O14493 209 aa14.74□□□□□ -0.05
SHMT2-232ENST00000557487 EIF4E2O60573 245 aaKnown RBP14.74□□□□□ -0.05
SHMT2-232ENST00000557487 RAB3DO95716 219 aa14.74□□□□□ -0.05
SHMT2-232ENST00000557487 CD37P11049 281 aa14.74□□□□□ -0.05
SHMT2-232ENST00000557487 GALNSP34059 522 aa14.74□□□□□ -0.05
SHMT2-232ENST00000557487 OC90Q02509 493 aaPredicted RBP14.74□□□□□ -0.05
SHMT2-232ENST00000557487 FUT7Q11130 342 aa14.74□□□□□ -0.05
SHMT2-232ENST00000557487 SMAD4Q13485 552 aaKnown RBP14.74□□□□□ -0.05
SHMT2-232ENST00000557487 ZMYND11Q15326 602 aa14.74□□□□□ -0.05
SHMT2-232ENST00000557487 FNDC7Q5VTL7 733 aa14.74□□□□□ -0.05
SHMT2-232ENST00000557487 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.74□□□□□ -0.05
SHMT2-232ENST00000557487 PM20D2Q8IYS1 436 aa14.74□□□□□ -0.05
SHMT2-232ENST00000557487 BEST3Q8N1M1 668 aa14.74□□□□□ -0.05
SHMT2-232ENST00000557487 PRSS35Q8N3Z0 413 aa14.74□□□□□ -0.05
SHMT2-232ENST00000557487 CLRN3Q8NCR9 226 aa14.74□□□□□ -0.05
SHMT2-232ENST00000557487 OR4D10Q8NGI6 311 aa14.74□□□□□ -0.05
SHMT2-232ENST00000557487 OR4C3Q8NH37 302 aa14.74□□□□□ -0.05
SHMT2-232ENST00000557487 CCL4L1Q8NHW4 92 aa14.74□□□□□ -0.05
SHMT2-232ENST00000557487 OTOSQ8NHW6 89 aa14.74□□□□□ -0.05
SHMT2-232ENST00000557487 FBXW5Q969U6 566 aa14.74□□□□□ -0.05
SHMT2-232ENST00000557487 TSSK2Q96PF2 358 aa14.74□□□□□ -0.05
SHMT2-232ENST00000557487 OR8B4Q96RC9 309 aa14.74□□□□□ -0.05
SHMT2-232ENST00000557487 GABRG3Q99928 467 aa14.74□□□□□ -0.05
SHMT2-232ENST00000557487 EDEM2Q9BV94 578 aa14.74□□□□□ -0.05
SHMT2-232ENST00000557487 POFUT1Q9H488 388 aa14.74□□□□□ -0.05
SHMT2-232ENST00000557487 FKRPQ9H9S5 495 aa14.74□□□□□ -0.05
SHMT2-232ENST00000557487 PCDHB16Q9NRJ7 776 aa14.74□□□□□ -0.05
SHMT2-232ENST00000557487 CKLFQ9UBR5 152 aa14.74□□□□□ -0.05
SHMT2-232ENST00000557487 TRAV14DV4A0A0A6YYC5 116 aa14.74□□□□□ -0.05
SHMT2-232ENST00000557487 TCRBV16S1A1N1A0A5B0 115 aa14.74□□□□□ -0.05
SHMT2-232ENST00000557487 MEGF11A6BM72 1044 aa14.74□□□□□ -0.05
SHMT2-232ENST00000557487 TEX46H3BTG2 121 aa14.74□□□□□ -0.05
SHMT2-232ENST00000557487 AKR7A3O95154 331 aa14.74□□□□□ -0.05
SHMT2-232ENST00000557487 SPDEFO95238 335 aa14.74□□□□□ -0.05
SHMT2-232ENST00000557487 RLN2P04090 185 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms