RNA–Protein interactions for RNA: ENST00000556831.5

SLIRP-207, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 729 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-207ENST00000556831 SOD3P08294 240 aa12.27□□□□□ -0.45
SLIRP-207ENST00000556831 TSPAN19P0C672 248 aa12.27□□□□□ -0.45
SLIRP-207ENST00000556831 CECR9P0C854 216 aa12.27□□□□□ -0.45
SLIRP-207ENST00000556831 CD99P14209 185 aa12.27□□□□□ -0.45
SLIRP-207ENST00000556831 ATP6V1B2P21281 511 aa12.27□□□□□ -0.45
SLIRP-207ENST00000556831 LSM11P83369 360 aaKnown RBP eCLIP12.27□□□□□ -0.45
SLIRP-207ENST00000556831 GALK2Q01415 458 aa12.27□□□□□ -0.45
SLIRP-207ENST00000556831 NAAAQ02083 359 aa12.27□□□□□ -0.45
SLIRP-207ENST00000556831 PIGFQ07326 219 aa12.27□□□□□ -0.45
SLIRP-207ENST00000556831 LCN8Q6JVE9 175 aa12.27□□□□□ -0.45
SLIRP-207ENST00000556831 NHLRC1Q6VVB1 395 aa12.27□□□□□ -0.45
SLIRP-207ENST00000556831 ZNF627Q7L945 461 aa12.27□□□□□ -0.45
SLIRP-207ENST00000556831 SLC16A14Q7RTX9 510 aa12.27□□□□□ -0.45
SLIRP-207ENST00000556831 OR4F15Q8NGB8 312 aa12.27□□□□□ -0.45
SLIRP-207ENST00000556831 FANK1Q8TC84 345 aa12.27□□□□□ -0.45
SLIRP-207ENST00000556831 ZNF570Q96NI8 536 aa12.27□□□□□ -0.45
SLIRP-207ENST00000556831 LRMDAQ9H2I8 198 aa12.27□□□□□ -0.45
SLIRP-207ENST00000556831 MAGIXQ9H6Y5 334 aa12.27□□□□□ -0.45
SLIRP-207ENST00000556831 YY1AP1Q9H869 796 aa12.27□□□□□ -0.45
SLIRP-207ENST00000556831 SMURF2Q9HAU4 748 aa12.27□□□□□ -0.45
SLIRP-207ENST00000556831 CBLN4Q9NTU7 201 aa12.27□□□□□ -0.45
SLIRP-207ENST00000556831 TMEM38BQ9NVV0 291 aa12.27□□□□□ -0.45
SLIRP-207ENST00000556831 TAS2R1Q9NYW7 299 aa12.27□□□□□ -0.45
SLIRP-207ENST00000556831 CRNNQ9UBG3 495 aaPredicted RBP12.27□□□□□ -0.45
SLIRP-207ENST00000556831 SPEF1Q9Y4P9 236 aa12.27□□□□□ -0.45
SLIRP-207ENST00000556831 FLNAP21333 2647 aaKnown RBP12.27□□□□□ -0.45
SLIRP-207ENST00000556831 SH3PXD2BA1X283 911 aa12.26□□□□□ -0.45
SLIRP-207ENST00000556831 E7EQL1 145 aa12.26□□□□□ -0.45
SLIRP-207ENST00000556831 CDC42EP2O14613 210 aa12.26□□□□□ -0.45
SLIRP-207ENST00000556831 ATP6V1G2O95670 118 aa12.26□□□□□ -0.45
SLIRP-207ENST00000556831 SEMG1P04279 462 aa12.26□□□□□ -0.45
SLIRP-207ENST00000556831 CD14P08571 375 aa12.26□□□□□ -0.45
SLIRP-207ENST00000556831 DANCRP0C864 163 aa12.26□□□□□ -0.45
SLIRP-207ENST00000556831 T-ENOLP0DO92 83 aa12.26□□□□□ -0.45
SLIRP-207ENST00000556831 NPR2P20594 1047 aa12.26□□□□□ -0.45
SLIRP-207ENST00000556831 APOBEC3AP31941 199 aaPredicted RBP12.26□□□□□ -0.45
SLIRP-207ENST00000556831 TTKP33981 857 aa12.26□□□□□ -0.45
SLIRP-207ENST00000556831 RPS6KA3P51812 740 aa12.26□□□□□ -0.45
SLIRP-207ENST00000556831 SNRPD2P62316 118 aaKnown RBP12.26□□□□□ -0.45
SLIRP-207ENST00000556831 RAB1AP62820 205 aa12.26□□□□□ -0.45
SLIRP-207ENST00000556831 ERVK-25P63136 954 aa12.26□□□□□ -0.45
SLIRP-207ENST00000556831 ADAM8P78325 824 aa12.26□□□□□ -0.45
SLIRP-207ENST00000556831 PLP2Q04941 152 aa12.26□□□□□ -0.45
SLIRP-207ENST00000556831 ETFDHQ16134 617 aa12.26□□□□□ -0.45
SLIRP-207ENST00000556831 PGGHGQ32M88 737 aa12.26□□□□□ -0.45
SLIRP-207ENST00000556831 NRN1LQ496H8 165 aa12.26□□□□□ -0.45
SLIRP-207ENST00000556831 THEM4Q5T1C6 240 aa12.26□□□□□ -0.45
SLIRP-207ENST00000556831 ARMC4Q5T2S8 1044 aa12.26□□□□□ -0.45
SLIRP-207ENST00000556831 VHLLQ6RSH7 139 aa12.26□□□□□ -0.45
SLIRP-207ENST00000556831 LINC00471Q8N535 108 aa12.26□□□□□ -0.45
SLIRP-207ENST00000556831 NSMAFQ92636 917 aa12.26□□□□□ -0.45
SLIRP-207ENST00000556831 DHRS1Q96LJ7 313 aa12.26□□□□□ -0.45
SLIRP-207ENST00000556831 TSPAN32Q96QS1 320 aa12.26□□□□□ -0.45
SLIRP-207ENST00000556831 TRAF4Q9BUZ4 470 aaPredicted RBP12.26□□□□□ -0.45
SLIRP-207ENST00000556831 BARX1Q9HBU1 254 aaPredicted RBP12.26□□□□□ -0.45
SLIRP-207ENST00000556831 CCNB1IP1Q9NPC3 277 aa12.26□□□□□ -0.45
SLIRP-207ENST00000556831 ZNF346Q9UL40 294 aaKnown RBP12.26□□□□□ -0.45
SLIRP-207ENST00000556831 PMF1-BGLAPU3KQ54 211 aa12.26□□□□□ -0.45
SLIRP-207ENST00000556831 CSPG4Q6UVK1 2322 aa12.26□□□□□ -0.45
SLIRP-207ENST00000556831 TNFRSF11BO00300 401 aa12.25□□□□□ -0.45
SLIRP-207ENST00000556831 SLC2A10O95528 541 aa12.25□□□□□ -0.45
SLIRP-207ENST00000556831 PTHP01270 115 aa12.25□□□□□ -0.45
SLIRP-207ENST00000556831 IGLV1-44P01699 117 aa12.25□□□□□ -0.45
SLIRP-207ENST00000556831 HOXB6P17509 224 aaKnown RBP12.25□□□□□ -0.45
SLIRP-207ENST00000556831 CDKN1AP38936 164 aa12.25□□□□□ -0.45
SLIRP-207ENST00000556831 GIPRP48546 466 aa12.25□□□□□ -0.45
SLIRP-207ENST00000556831 HSF2Q03933 536 aa12.25□□□□□ -0.45
SLIRP-207ENST00000556831 RUNX1T1Q06455 604 aa12.25□□□□□ -0.45
SLIRP-207ENST00000556831 HIST3H3Q16695 136 aa12.25□□□□□ -0.45
SLIRP-207ENST00000556831 C10orf128Q5T292 105 aa12.25□□□□□ -0.45
SLIRP-207ENST00000556831 GPR139Q6DWJ6 353 aa12.25□□□□□ -0.45
SLIRP-207ENST00000556831 LRFN4Q6PJG9 635 aa12.25□□□□□ -0.45
SLIRP-207ENST00000556831 SMARCD3Q6STE5 483 aa12.25□□□□□ -0.45
SLIRP-207ENST00000556831 PRSS57Q6UWY2 283 aa12.25□□□□□ -0.45
SLIRP-207ENST00000556831 TSEN54Q7Z6J9 526 aaKnown RBP12.25□□□□□ -0.45
SLIRP-207ENST00000556831 DTX2Q86UW9 622 aa12.25□□□□□ -0.45
SLIRP-207ENST00000556831 ARIH2OSQ8N7S6 290 aa12.25□□□□□ -0.45
SLIRP-207ENST00000556831 WFDC11Q8NEX6 87 aa12.25□□□□□ -0.45
SLIRP-207ENST00000556831 HDAC2Q92769 488 aaKnown RBP12.25□□□□□ -0.45
SLIRP-207ENST00000556831 KCNK17Q96T54 332 aa12.25□□□□□ -0.45
SLIRP-207ENST00000556831 MRPL13Q9BYD1 178 aaKnown RBP12.25□□□□□ -0.45
SLIRP-207ENST00000556831 GRIP2Q9C0E4 1043 aa12.25□□□□□ -0.45
SLIRP-207ENST00000556831 C1orf198Q9H425 327 aa12.25□□□□□ -0.45
SLIRP-207ENST00000556831 REEP1Q9H902 201 aa12.25□□□□□ -0.45
SLIRP-207ENST00000556831 SEC61A2Q9H9S3 476 aa12.25□□□□□ -0.45
SLIRP-207ENST00000556831 CA10Q9NS85 328 aa12.25□□□□□ -0.45
SLIRP-207ENST00000556831 ZNF701Q9NV72 531 aaPredicted RBP12.25□□□□□ -0.45
SLIRP-207ENST00000556831 IQCMA0A1B0GVH7 501 aa12.24□□□□□ -0.45
SLIRP-207ENST00000556831 A0A1W2PPL8 197 aa12.24□□□□□ -0.45
SLIRP-207ENST00000556831 CELA3BP08861 270 aa12.24□□□□□ -0.45
SLIRP-207ENST00000556831 PAX1P15863 534 aa12.24□□□□□ -0.45
SLIRP-207ENST00000556831 FPR3P25089 353 aa12.24□□□□□ -0.45
SLIRP-207ENST00000556831 NOS3P29474 1203 aa12.24□□□□□ -0.45
SLIRP-207ENST00000556831 SDHAP31040 664 aa12.24□□□□□ -0.45
SLIRP-207ENST00000556831 SLC6A6P31641 620 aa12.24□□□□□ -0.45
SLIRP-207ENST00000556831 OMPP47874 163 aa12.24□□□□□ -0.45
SLIRP-207ENST00000556831 LIMS1P48059 325 aa12.24□□□□□ -0.45
SLIRP-207ENST00000556831 RPS23P62266 143 aaKnown RBP12.24□□□□□ -0.45
SLIRP-207ENST00000556831 FMODQ06828 376 aa12.24□□□□□ -0.45
SLIRP-207ENST00000556831 TRAP1Q12931 704 aaKnown RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms