RNA–Protein interactions for RNA: ENST00000556486.5

SCFD1-220, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-220ENST00000556486 CLDN17P56750 224 aa8.59□□□□□ -1.03
SCFD1-220ENST00000556486 ARF1P84077 181 aaKnown RBP8.59□□□□□ -1.03
SCFD1-220ENST00000556486 IL1RL1Q01638 556 aa8.59□□□□□ -1.03
SCFD1-220ENST00000556486 MFSD13AQ14CX5 517 aa8.59□□□□□ -1.03
SCFD1-220ENST00000556486 GTDC1Q4AE62 458 aa8.59□□□□□ -1.03
SCFD1-220ENST00000556486 ZNF311Q5JNZ3 666 aa8.59□□□□□ -1.03
SCFD1-220ENST00000556486 PGBD2Q6P3X8 592 aa8.59□□□□□ -1.03
SCFD1-220ENST00000556486 H1FNTQ75WM6 255 aaPredicted RBP8.59□□□□□ -1.03
SCFD1-220ENST00000556486 MAVSQ7Z434 540 aa8.59□□□□□ -1.03
SCFD1-220ENST00000556486 ZDHHC13Q8IUH4 622 aa8.59□□□□□ -1.03
SCFD1-220ENST00000556486 GLB1L2Q8IW92 636 aa8.59□□□□□ -1.03
SCFD1-220ENST00000556486 KDM8Q8N371 416 aa8.59□□□□□ -1.03
SCFD1-220ENST00000556486 Q8N3U1 123 aa8.59□□□□□ -1.03
SCFD1-220ENST00000556486 SCAIQ8N9R8 606 aa8.59□□□□□ -1.03
SCFD1-220ENST00000556486 BBS10Q8TAM1 723 aa8.59□□□□□ -1.03
SCFD1-220ENST00000556486 SLC38A4Q969I6 547 aa8.59□□□□□ -1.03
SCFD1-220ENST00000556486 TAAR8Q969N4 342 aa8.59□□□□□ -1.03
SCFD1-220ENST00000556486 TMEM186Q96B77 213 aa8.59□□□□□ -1.03
SCFD1-220ENST00000556486 ZNF75AQ96N20 296 aa8.59□□□□□ -1.03
SCFD1-220ENST00000556486 DUX5Q96PT3 197 aa8.59□□□□□ -1.03
SCFD1-220ENST00000556486 LRRC37BQ96QE4 947 aa8.59□□□□□ -1.03
SCFD1-220ENST00000556486 OR2M2Q96R28 347 aa8.59□□□□□ -1.03
SCFD1-220ENST00000556486 RBM4Q9BWF3 364 aaKnown RBP8.59□□□□□ -1.03
SCFD1-220ENST00000556486 PAIP1Q9H074 479 aaKnown RBP8.59□□□□□ -1.03
SCFD1-220ENST00000556486 RAD21L1Q9H4I0 556 aa8.59□□□□□ -1.03
SCFD1-220ENST00000556486 ZNF696Q9H7X3 374 aa8.59□□□□□ -1.03
SCFD1-220ENST00000556486 CACYBPQ9HB71 228 aaKnown RBP8.59□□□□□ -1.03
SCFD1-220ENST00000556486 NOX3Q9HBY0 568 aa8.59□□□□□ -1.03
SCFD1-220ENST00000556486 CRLF2Q9HC73 371 aa8.59□□□□□ -1.03
SCFD1-220ENST00000556486 KCNK9Q9NPC2 374 aa8.59□□□□□ -1.03
SCFD1-220ENST00000556486 TREM2Q9NZC2 230 aa8.59□□□□□ -1.03
SCFD1-220ENST00000556486 USP22Q9UPT9 525 aa8.59□□□□□ -1.03
SCFD1-220ENST00000556486 PPIAL4AQ9Y536 164 aa8.59□□□□□ -1.03
SCFD1-220ENST00000556486 NBEAL2Q6ZNJ1 2754 aa8.58□□□□□ -1.04
SCFD1-220ENST00000556486 TRAV36DV7A0A075B6V5 113 aa8.58□□□□□ -1.04
SCFD1-220ENST00000556486 A0A1B0GWA3 101 aa8.58□□□□□ -1.04
SCFD1-220ENST00000556486 TMEM120BA0PK00 339 aa8.58□□□□□ -1.04
SCFD1-220ENST00000556486 B4DSR2 109 aa8.58□□□□□ -1.04
SCFD1-220ENST00000556486 CLIC1O00299 241 aa8.58□□□□□ -1.04
SCFD1-220ENST00000556486 ADRA2AP08913 450 aa8.58□□□□□ -1.04
SCFD1-220ENST00000556486 TCN1P20061 433 aaPredicted RBP8.58□□□□□ -1.04
SCFD1-220ENST00000556486 PCMT1P22061 227 aa8.58□□□□□ -1.04
SCFD1-220ENST00000556486 NR4A1P22736 598 aa8.58□□□□□ -1.04
SCFD1-220ENST00000556486 HTR2AP28223 471 aa8.58□□□□□ -1.04
SCFD1-220ENST00000556486 GTF2E2P29084 291 aaKnown RBP8.58□□□□□ -1.04
SCFD1-220ENST00000556486 GRPRP30550 384 aa8.58□□□□□ -1.04
SCFD1-220ENST00000556486 POLR2JP52435 117 aaKnown RBP8.58□□□□□ -1.04
SCFD1-220ENST00000556486 DAG1Q14118 895 aa8.58□□□□□ -1.04
SCFD1-220ENST00000556486 CEACAM16Q2WEN9 425 aa8.58□□□□□ -1.04
SCFD1-220ENST00000556486 C6orf10Q5SRN2 563 aa8.58□□□□□ -1.04
SCFD1-220ENST00000556486 CEP85LQ5SZL2 805 aa8.58□□□□□ -1.04
SCFD1-220ENST00000556486 LRIF1Q5T3J3 769 aa8.58□□□□□ -1.04
SCFD1-220ENST00000556486 HHATQ5VTY9 493 aa8.58□□□□□ -1.04
SCFD1-220ENST00000556486 ATG16L1Q676U5 607 aa8.58□□□□□ -1.04
SCFD1-220ENST00000556486 ULK3Q6PHR2 472 aa8.58□□□□□ -1.04
SCFD1-220ENST00000556486 DHRS4L2Q6PKH6 230 aa8.58□□□□□ -1.04
SCFD1-220ENST00000556486 SPATA21Q7Z572 469 aa8.58□□□□□ -1.04
SCFD1-220ENST00000556486 MDP1Q86V88 176 aa8.58□□□□□ -1.04
SCFD1-220ENST00000556486 C20orf196Q8IYI0 205 aa8.58□□□□□ -1.04
SCFD1-220ENST00000556486 CDK20Q8IZL9 346 aa8.58□□□□□ -1.04
SCFD1-220ENST00000556486 GPR137CQ8N3F9 429 aa8.58□□□□□ -1.04
SCFD1-220ENST00000556486 OR9I1Q8NGQ6 314 aa8.58□□□□□ -1.04
SCFD1-220ENST00000556486 CLDND2Q8NHS1 167 aa8.58□□□□□ -1.04
SCFD1-220ENST00000556486 SLC25A36Q96CQ1 311 aa8.58□□□□□ -1.04
SCFD1-220ENST00000556486 CLPTM1LQ96KA5 538 aa8.58□□□□□ -1.04
SCFD1-220ENST00000556486 PARD6BQ9BYG5 372 aa8.58□□□□□ -1.04
SCFD1-220ENST00000556486 EVA1AQ9H8M9 152 aa8.58□□□□□ -1.04
SCFD1-220ENST00000556486 DYNLRB1Q9NP97 96 aa8.58□□□□□ -1.04
SCFD1-220ENST00000556486 KLHL14Q9P2G3 628 aa8.58□□□□□ -1.04
SCFD1-220ENST00000556486 SEC14L4Q9UDX3 406 aa8.58□□□□□ -1.04
SCFD1-220ENST00000556486 TESQ9UGI8 421 aaKnown RBP8.58□□□□□ -1.04
SCFD1-220ENST00000556486 A0A087WUJ7 227 aa8.57□□□□□ -1.04
SCFD1-220ENST00000556486 MS4A18H0YCH9 400 aa8.57□□□□□ -1.04
SCFD1-220ENST00000556486 UBDO15205 165 aa8.57□□□□□ -1.04
SCFD1-220ENST00000556486 SYNGR3O43761 229 aa8.57□□□□□ -1.04
SCFD1-220ENST00000556486 CSTBP04080 98 aaKnown RBP8.57□□□□□ -1.04
SCFD1-220ENST00000556486 KITP10721 976 aa8.57□□□□□ -1.04
SCFD1-220ENST00000556486 ZNF35P13682 527 aa8.57□□□□□ -1.04
SCFD1-220ENST00000556486 ZNF14P17017 642 aaPredicted RBP8.57□□□□□ -1.04
SCFD1-220ENST00000556486 GLRXP35754 106 aa8.57□□□□□ -1.04
SCFD1-220ENST00000556486 MRPS11P82912 194 aaKnown RBP8.57□□□□□ -1.04
SCFD1-220ENST00000556486 HOXC5Q00444 222 aa8.57□□□□□ -1.04
SCFD1-220ENST00000556486 SNTB2Q13425 540 aaKnown RBP8.57□□□□□ -1.04
SCFD1-220ENST00000556486 PMS2P11Q13670 270 aa8.57□□□□□ -1.04
SCFD1-220ENST00000556486 C1DQ13901 141 aaKnown RBP8.57□□□□□ -1.04
SCFD1-220ENST00000556486 MS4A18Q3C1V0 323 aa8.57□□□□□ -1.04
SCFD1-220ENST00000556486 SLC9B1Q4ZJI4 515 aa8.57□□□□□ -1.04
SCFD1-220ENST00000556486 ALG10BQ5I7T1 473 aa8.57□□□□□ -1.04
SCFD1-220ENST00000556486 XP32Q5T750 250 aa8.57□□□□□ -1.04
SCFD1-220ENST00000556486 TEPPQ6URK8 271 aa8.57□□□□□ -1.04
SCFD1-220ENST00000556486 ZNF771Q7L3S4 317 aaPredicted RBP8.57□□□□□ -1.04
SCFD1-220ENST00000556486 COMTD1Q86VU5 262 aa8.57□□□□□ -1.04
SCFD1-220ENST00000556486 RNF152Q8N8N0 203 aa8.57□□□□□ -1.04
SCFD1-220ENST00000556486 ZDHHC22Q8N966 263 aa8.57□□□□□ -1.04
SCFD1-220ENST00000556486 BHLHE22Q8NFJ8 381 aaPredicted RBP8.57□□□□□ -1.04
SCFD1-220ENST00000556486 CKAP2Q8WWK9 683 aa8.57□□□□□ -1.04
SCFD1-220ENST00000556486 MAL2Q969L2 176 aa8.57□□□□□ -1.04
SCFD1-220ENST00000556486 MRPL24Q96A35 216 aaKnown RBP8.57□□□□□ -1.04
SCFD1-220ENST00000556486 OR52B2Q96RD2 323 aa8.57□□□□□ -1.04
SCFD1-220ENST00000556486 ZNF747Q9BV97 191 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms