RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 BCAS4Q8TDM0 211 aa10.02□□□□□ -0.81
SLIRP-205ENST00000556310 MCHR2Q969V1 340 aa10.02□□□□□ -0.81
SLIRP-205ENST00000556310 MCUR1Q96AQ8 359 aa10.02□□□□□ -0.81
SLIRP-205ENST00000556310 FAM46AQ96IP4 442 aaKnown RBP10.02□□□□□ -0.81
SLIRP-205ENST00000556310 ZNF347Q96SE7 839 aa10.02□□□□□ -0.81
SLIRP-205ENST00000556310 ALG12Q9BV10 488 aa10.02□□□□□ -0.81
SLIRP-205ENST00000556310 NDEL1Q9GZM8 345 aa10.02□□□□□ -0.81
SLIRP-205ENST00000556310 DENND2DQ9H6A0 471 aaPredicted RBP10.02□□□□□ -0.81
SLIRP-205ENST00000556310 SMURF2Q9HAU4 748 aa10.02□□□□□ -0.81
SLIRP-205ENST00000556310 NOX3Q9HBY0 568 aa10.02□□□□□ -0.81
SLIRP-205ENST00000556310 KRCC1Q9NPI7 259 aaPredicted RBP10.02□□□□□ -0.81
SLIRP-205ENST00000556310 CBLN4Q9NTU7 201 aa10.02□□□□□ -0.81
SLIRP-205ENST00000556310 ZNF224Q9NZL3 707 aa10.02□□□□□ -0.81
SLIRP-205ENST00000556310 FBXL3Q9UKT7 428 aa10.02□□□□□ -0.81
SLIRP-205ENST00000556310 ARFGEF3Q5TH69 2177 aa10.02□□□□□ -0.81
SLIRP-205ENST00000556310 SETD2Q9BYW2 2564 aaPredicted RBP10.01□□□□□ -0.81
SLIRP-205ENST00000556310 ZANQ9Y493 2812 aa10.01□□□□□ -0.81
SLIRP-205ENST00000556310 IGHV2OR16-5A0A0B4J2B6 119 aa10.01□□□□□ -0.81
SLIRP-205ENST00000556310 TRBV4-1A0A0J9YWV2 114 aa10.01□□□□□ -0.81
SLIRP-205ENST00000556310 A6NIZ1 184 aa10.01□□□□□ -0.81
SLIRP-205ENST00000556310 FARS2O95363 451 aaKnown RBP10.01□□□□□ -0.81
SLIRP-205ENST00000556310 OR8G3PP0DMU2 310 aa10.01□□□□□ -0.81
SLIRP-205ENST00000556310 CD79AP11912 226 aa10.01□□□□□ -0.81
SLIRP-205ENST00000556310 FOSL1P15407 271 aa10.01□□□□□ -0.81
SLIRP-205ENST00000556310 ZNF14P17017 642 aaPredicted RBP10.01□□□□□ -0.81
SLIRP-205ENST00000556310 ATP6V1B2P21281 511 aa10.01□□□□□ -0.81
SLIRP-205ENST00000556310 CALCRP30988 508 aa10.01□□□□□ -0.81
SLIRP-205ENST00000556310 APOBEC3AP31941 199 aaPredicted RBP10.01□□□□□ -0.81
SLIRP-205ENST00000556310 ZNF84P51523 738 aa10.01□□□□□ -0.81
SLIRP-205ENST00000556310 CTXN1P60606 82 aa10.01□□□□□ -0.81
SLIRP-205ENST00000556310 RAP1BP61224 184 aa10.01□□□□□ -0.81
SLIRP-205ENST00000556310 RPL27P61353 136 aaKnown RBP10.01□□□□□ -0.81
SLIRP-205ENST00000556310 RAP1AP62834 184 aa10.01□□□□□ -0.81
SLIRP-205ENST00000556310 SPIBQ01892 262 aa10.01□□□□□ -0.81
SLIRP-205ENST00000556310 CD47Q08722 323 aa10.01□□□□□ -0.81
SLIRP-205ENST00000556310 ZBED5Q49AG3 693 aa10.01□□□□□ -0.81
SLIRP-205ENST00000556310 RINLQ6ZS11 566 aa10.01□□□□□ -0.81
SLIRP-205ENST00000556310 TRPM8Q7Z2W7 1104 aa10.01□□□□□ -0.81
SLIRP-205ENST00000556310 DPPA2Q7Z7J5 298 aa10.01□□□□□ -0.81
SLIRP-205ENST00000556310 IGFN1Q86VF2 1251 aa10.01□□□□□ -0.81
SLIRP-205ENST00000556310 SLC22A24Q8N4F4 322 aa10.01□□□□□ -0.81
SLIRP-205ENST00000556310 NUP37Q8NFH4 326 aa10.01□□□□□ -0.81
SLIRP-205ENST00000556310 IL17RDQ8NFM7 739 aa10.01□□□□□ -0.81
SLIRP-205ENST00000556310 OR4F15Q8NGB8 312 aa10.01□□□□□ -0.81
SLIRP-205ENST00000556310 OR4K5Q8NGD3 323 aa10.01□□□□□ -0.81
SLIRP-205ENST00000556310 ZNF519Q8TB69 540 aa10.01□□□□□ -0.81
SLIRP-205ENST00000556310 FNDC8Q8TC99 324 aa10.01□□□□□ -0.81
SLIRP-205ENST00000556310 HDAC2Q92769 488 aaKnown RBP10.01□□□□□ -0.81
SLIRP-205ENST00000556310 NMD3Q96D46 503 aaKnown RBP10.01□□□□□ -0.81
SLIRP-205ENST00000556310 Q96MF0 132 aa10.01□□□□□ -0.81
SLIRP-205ENST00000556310 TSPAN32Q96QS1 320 aa10.01□□□□□ -0.81
SLIRP-205ENST00000556310 TNFRSF13CQ96RJ3 184 aa10.01□□□□□ -0.81
SLIRP-205ENST00000556310 FUZQ9BT04 418 aa10.01□□□□□ -0.81
SLIRP-205ENST00000556310 CACNG6Q9BXT2 260 aa10.01□□□□□ -0.81
SLIRP-205ENST00000556310 C1orf21Q9H246 121 aa10.01□□□□□ -0.81
SLIRP-205ENST00000556310 IL1RAPQ9NPH3 570 aa10.01□□□□□ -0.81
SLIRP-205ENST00000556310 PRPF19Q9UMS4 504 aaKnown RBP10.01□□□□□ -0.81
SLIRP-205ENST00000556310 NSD1Q96L73 2696 aaPredicted RBP10□□□□□ -0.81
SLIRP-205ENST00000556310 SH3PXD2BA1X283 911 aa10□□□□□ -0.81
SLIRP-205ENST00000556310 PDE5AO76074 875 aa10□□□□□ -0.81
SLIRP-205ENST00000556310 GADD45GO95257 159 aa10□□□□□ -0.81
SLIRP-205ENST00000556310 SLC2A10O95528 541 aa10□□□□□ -0.81
SLIRP-205ENST00000556310 RAB36O95755 333 aa10□□□□□ -0.81
SLIRP-205ENST00000556310 CD14P08571 375 aa10□□□□□ -0.81
SLIRP-205ENST00000556310 ACVR1BP36896 505 aa10□□□□□ -0.81
SLIRP-205ENST00000556310 OMPP47874 163 aa10□□□□□ -0.81
SLIRP-205ENST00000556310 GIPRP48546 466 aa10□□□□□ -0.81
SLIRP-205ENST00000556310 PTDSS1P48651 473 aaKnown RBP10□□□□□ -0.81
SLIRP-205ENST00000556310 RAB1AP62820 205 aa10□□□□□ -0.81
SLIRP-205ENST00000556310 MYBPC1Q00872 1141 aa10□□□□□ -0.81
SLIRP-205ENST00000556310 FMODQ06828 376 aa10□□□□□ -0.81
SLIRP-205ENST00000556310 SEC23BQ15437 767 aa10□□□□□ -0.81
SLIRP-205ENST00000556310 LCN8Q6JVE9 175 aa10□□□□□ -0.81
SLIRP-205ENST00000556310 CYP2R1Q6VVX0 501 aa10□□□□□ -0.81
SLIRP-205ENST00000556310 ZDHHC21Q8IVQ6 265 aa10□□□□□ -0.81
SLIRP-205ENST00000556310 SKA3Q8IX90 412 aa10□□□□□ -0.81
SLIRP-205ENST00000556310 OR52J3Q8NH60 311 aa10□□□□□ -0.81
SLIRP-205ENST00000556310 RSRC1Q96IZ7 334 aaKnown RBP10□□□□□ -0.81
SLIRP-205ENST00000556310 ZNF75AQ96N20 296 aa10□□□□□ -0.81
SLIRP-205ENST00000556310 GPX7Q96SL4 187 aaPredicted RBP10□□□□□ -0.81
SLIRP-205ENST00000556310 ZNF442Q9H7R0 627 aa10□□□□□ -0.81
SLIRP-205ENST00000556310 BARX1Q9HBU1 254 aaPredicted RBP10□□□□□ -0.81
SLIRP-205ENST00000556310 CA10Q9NS85 328 aa10□□□□□ -0.81
SLIRP-205ENST00000556310 ZNF346Q9UL40 294 aaKnown RBP10□□□□□ -0.81
SLIRP-205ENST00000556310 SIGLEC7Q9Y286 467 aa10□□□□□ -0.81
SLIRP-205ENST00000556310 NF1P21359 2839 aa10□□□□□ -0.81
SLIRP-205ENST00000556310 C2CD3Q4AC94 2353 aa10□□□□□ -0.81
SLIRP-205ENST00000556310 TLN2Q9Y4G6 2542 aa9.99□□□□□ -0.81
SLIRP-205ENST00000556310 TCRBV5S2A0A599 114 aa9.99□□□□□ -0.81
SLIRP-205ENST00000556310 H7C417 338 aa9.99□□□□□ -0.81
SLIRP-205ENST00000556310 MGRN1O60291 552 aa9.99□□□□□ -0.81
SLIRP-205ENST00000556310 NDUFB2O95178 105 aa9.99□□□□□ -0.81
SLIRP-205ENST00000556310 IGHV4-39P01824 125 aa9.99□□□□□ -0.81
SLIRP-205ENST00000556310 BMP4P12644 408 aa9.99□□□□□ -0.81
SLIRP-205ENST00000556310 ZNF26P17031 533 aaPredicted RBP9.99□□□□□ -0.81
SLIRP-205ENST00000556310 RRM2P31350 389 aa9.99□□□□□ -0.81
SLIRP-205ENST00000556310 RPL4P36578 427 aaKnown RBP9.99□□□□□ -0.81
SLIRP-205ENST00000556310 MAGEA2P43356 314 aa9.99□□□□□ -0.81
SLIRP-205ENST00000556310 MRPS34P82930 218 aaKnown RBP9.99□□□□□ -0.81
SLIRP-205ENST00000556310 HGFACQ04756 655 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms