RNA–Protein interactions for RNA: ENST00000555943.1

SUPT16H-204, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2 BASIC

Gene SUPT16H, Length 915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-204ENST00000555943 ACVR2AP27037 513 aa6.77□□□□□ -1.33
SUPT16H-204ENST00000555943 PEX2P28328 305 aa6.77□□□□□ -1.33
SUPT16H-204ENST00000555943 SLC6A6P31641 620 aa6.77□□□□□ -1.33
SUPT16H-204ENST00000555943 RPS19P39019 145 aaKnown RBP6.77□□□□□ -1.33
SUPT16H-204ENST00000555943 AQP2P41181 271 aa6.77□□□□□ -1.33
SUPT16H-204ENST00000555943 GSSP48637 474 aa6.77□□□□□ -1.33
SUPT16H-204ENST00000555943 DAPP51397 102 aa6.77□□□□□ -1.33
SUPT16H-204ENST00000555943 AGFG1P52594 562 aaKnown RBP6.77□□□□□ -1.33
SUPT16H-204ENST00000555943 ESRRGP62508 458 aa6.77□□□□□ -1.33
SUPT16H-204ENST00000555943 LTBQ06643 244 aa6.77□□□□□ -1.33
SUPT16H-204ENST00000555943 PUDPQ08623 228 aa6.77□□□□□ -1.33
SUPT16H-204ENST00000555943 RASGEF1BQ0VAM2 473 aa6.77□□□□□ -1.33
SUPT16H-204ENST00000555943 GALEQ14376 348 aa6.77□□□□□ -1.33
SUPT16H-204ENST00000555943 RAB39AQ14964 217 aa6.77□□□□□ -1.33
SUPT16H-204ENST00000555943 RNPS1Q15287 305 aaKnown RBP6.77□□□□□ -1.33
SUPT16H-204ENST00000555943 SNCBQ16143 134 aa6.77□□□□□ -1.33
SUPT16H-204ENST00000555943 ZNF239Q16600 458 aaKnown RBP6.77□□□□□ -1.33
SUPT16H-204ENST00000555943 RFX4Q33E94 735 aa6.77□□□□□ -1.33
SUPT16H-204ENST00000555943 ALG10Q5BKT4 473 aa6.77□□□□□ -1.33
SUPT16H-204ENST00000555943 OGFRL1Q5TC84 451 aaPredicted RBP6.77□□□□□ -1.33
SUPT16H-204ENST00000555943 ZNF770Q6IQ21 691 aaPredicted RBP6.77□□□□□ -1.33
SUPT16H-204ENST00000555943 MTFR2Q6P444 385 aa6.77□□□□□ -1.33
SUPT16H-204ENST00000555943 FAHD1Q6P587 224 aa6.77□□□□□ -1.33
SUPT16H-204ENST00000555943 SMARCD3Q6STE5 483 aa6.77□□□□□ -1.33
SUPT16H-204ENST00000555943 RASSF6Q6ZTQ3 369 aa6.77□□□□□ -1.33
SUPT16H-204ENST00000555943 SLC46A3Q7Z3Q1 461 aa6.77□□□□□ -1.33
SUPT16H-204ENST00000555943 GALNT5Q7Z7M9 940 aa6.77□□□□□ -1.33
SUPT16H-204ENST00000555943 UEVLDQ8IX04 471 aa6.77□□□□□ -1.33
SUPT16H-204ENST00000555943 SLC43A2Q8N370 569 aa6.77□□□□□ -1.33
SUPT16H-204ENST00000555943 PACRGLQ8N7B6 248 aa6.77□□□□□ -1.33
SUPT16H-204ENST00000555943 TMEM99Q8N816 258 aa6.77□□□□□ -1.33
SUPT16H-204ENST00000555943 FNDC9Q8TBE3 224 aa6.77□□□□□ -1.33
SUPT16H-204ENST00000555943 TEX47Q8TBZ9 253 aa6.77□□□□□ -1.33
SUPT16H-204ENST00000555943 OXGR1Q96P68 337 aa6.77□□□□□ -1.33
SUPT16H-204ENST00000555943 SF3B5Q9BWJ5 86 aaKnown RBP6.77□□□□□ -1.33
SUPT16H-204ENST00000555943 OR52D1Q9H346 318 aa6.77□□□□□ -1.33
SUPT16H-204ENST00000555943 RIBC2Q9H4K1 309 aa6.77□□□□□ -1.33
SUPT16H-204ENST00000555943 CALHM2Q9HA72 323 aa6.77□□□□□ -1.33
SUPT16H-204ENST00000555943 INIPQ9NRY2 104 aa6.77□□□□□ -1.33
SUPT16H-204ENST00000555943 TBC1D23Q9NUY8 699 aa6.77□□□□□ -1.33
SUPT16H-204ENST00000555943 KLHL9Q9P2J3 617 aa6.77□□□□□ -1.33
SUPT16H-204ENST00000555943 SH3BGRL2Q9UJC5 107 aa6.77□□□□□ -1.33
SUPT16H-204ENST00000555943 RASD1Q9Y272 281 aa6.77□□□□□ -1.33
SUPT16H-204ENST00000555943 A1L4Q6 167 aa6.76□□□□□ -1.33
SUPT16H-204ENST00000555943 MCIDASD6RGH6 385 aa6.76□□□□□ -1.33
SUPT16H-204ENST00000555943 MS4A18H0YCH9 400 aa6.76□□□□□ -1.33
SUPT16H-204ENST00000555943 SOCS2O14508 198 aa6.76□□□□□ -1.33
SUPT16H-204ENST00000555943 SMAD9O15198 467 aaKnown RBP6.76□□□□□ -1.33
SUPT16H-204ENST00000555943 SLC16A6O15403 523 aa6.76□□□□□ -1.33
SUPT16H-204ENST00000555943 LRRTM2O43300 516 aa6.76□□□□□ -1.33
SUPT16H-204ENST00000555943 CYTIPO60759 359 aa6.76□□□□□ -1.33
SUPT16H-204ENST00000555943 PTP4A3O75365 173 aa6.76□□□□□ -1.33
SUPT16H-204ENST00000555943 TUSC2O75896 110 aa6.76□□□□□ -1.33
SUPT16H-204ENST00000555943 SOX14O95416 240 aa6.76□□□□□ -1.33
SUPT16H-204ENST00000555943 CLDN1O95832 211 aa6.76□□□□□ -1.33
SUPT16H-204ENST00000555943 BCL10O95999 233 aa6.76□□□□□ -1.33
SUPT16H-204ENST00000555943 ALPLP05186 524 aa6.76□□□□□ -1.33
SUPT16H-204ENST00000555943 RNF224P0DH78 156 aa6.76□□□□□ -1.33
SUPT16H-204ENST00000555943 PTDSS1P48651 473 aaKnown RBP6.76□□□□□ -1.33
SUPT16H-204ENST00000555943 RPS6KA3P51812 740 aa6.76□□□□□ -1.33
SUPT16H-204ENST00000555943 CRISP1P54107 249 aa6.76□□□□□ -1.33
SUPT16H-204ENST00000555943 RIPPLY3P57055 190 aa6.76□□□□□ -1.33
SUPT16H-204ENST00000555943 CTXN1P60606 82 aa6.76□□□□□ -1.33
SUPT16H-204ENST00000555943 H3F3AP84243 136 aa6.76□□□□□ -1.33
SUPT16H-204ENST00000555943 PPP2R2BQ00005 443 aa6.76□□□□□ -1.33
SUPT16H-204ENST00000555943 RPL18Q07020 188 aaKnown RBP6.76□□□□□ -1.33
SUPT16H-204ENST00000555943 ZP4Q12836 540 aa6.76□□□□□ -1.33
SUPT16H-204ENST00000555943 MS4A18Q3C1V0 323 aa6.76□□□□□ -1.33
SUPT16H-204ENST00000555943 SLC36A3Q495N2 470 aa6.76□□□□□ -1.33
SUPT16H-204ENST00000555943 ACSF3Q4G176 576 aaPredicted RBP6.76□□□□□ -1.33
SUPT16H-204ENST00000555943 CLEC12AQ5QGZ9 265 aa6.76□□□□□ -1.33
SUPT16H-204ENST00000555943 C1orf185Q5T7R7 199 aa6.76□□□□□ -1.33
SUPT16H-204ENST00000555943 NSUN5P2Q63ZY6 315 aa6.76□□□□□ -1.33
SUPT16H-204ENST00000555943 KDM4DQ6B0I6 523 aa6.76□□□□□ -1.33
SUPT16H-204ENST00000555943 OR2A2Q6IF42 318 aa6.76□□□□□ -1.33
SUPT16H-204ENST00000555943 KLHL17Q6TDP4 642 aa6.76□□□□□ -1.33
SUPT16H-204ENST00000555943 B3GNT6Q6ZMB0 384 aa6.76□□□□□ -1.33
SUPT16H-204ENST00000555943 ZNF620Q6ZNG0 422 aa6.76□□□□□ -1.33
SUPT16H-204ENST00000555943 HDDC2Q7Z4H3 204 aa6.76□□□□□ -1.33
SUPT16H-204ENST00000555943 PXKQ7Z7A4 578 aa6.76□□□□□ -1.33
SUPT16H-204ENST00000555943 EPHX4Q8IUS5 362 aa6.76□□□□□ -1.33
SUPT16H-204ENST00000555943 KDM8Q8N371 416 aa6.76□□□□□ -1.33
SUPT16H-204ENST00000555943 ADPRHL1Q8NDY3 354 aa6.76□□□□□ -1.33
SUPT16H-204ENST00000555943 ZNF555Q8NEP9 628 aa6.76□□□□□ -1.33
SUPT16H-204ENST00000555943 MOSPD2Q8NHP6 518 aa6.76□□□□□ -1.33
SUPT16H-204ENST00000555943 SAMD8Q96LT4 415 aa6.76□□□□□ -1.33
SUPT16H-204ENST00000555943 GPA33Q99795 319 aa6.76□□□□□ -1.33
SUPT16H-204ENST00000555943 SLC29A1Q99808 456 aa6.76□□□□□ -1.33
SUPT16H-204ENST00000555943 VRK1Q99986 396 aaPredicted RBP6.76□□□□□ -1.33
SUPT16H-204ENST00000555943 IFT27Q9BW83 186 aa6.76□□□□□ -1.33
SUPT16H-204ENST00000555943 SSBP3Q9BWW4 388 aaPredicted RBP6.76□□□□□ -1.33
SUPT16H-204ENST00000555943 TSSK6Q9BXA6 273 aa6.76□□□□□ -1.33
SUPT16H-204ENST00000555943 POLDIP3Q9BY77 421 aaKnown RBP6.76□□□□□ -1.33
SUPT16H-204ENST00000555943 EGLN3Q9H6Z9 239 aa6.76□□□□□ -1.33
SUPT16H-204ENST00000555943 GLRX2Q9NS18 164 aa6.76□□□□□ -1.33
SUPT16H-204ENST00000555943 SMPD3Q9NY59 655 aaPredicted RBP6.76□□□□□ -1.33
SUPT16H-204ENST00000555943 USE1Q9NZ43 259 aa6.76□□□□□ -1.33
SUPT16H-204ENST00000555943 EMC3Q9P0I2 261 aa6.76□□□□□ -1.33
SUPT16H-204ENST00000555943 KLHL13Q9P2N7 655 aa6.76□□□□□ -1.33
SUPT16H-204ENST00000555943 GRHPRQ9UBQ7 328 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms