RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 CDK5R2Q13319 367 aa9.92□□□□□ -0.82
SHMT2-220ENST00000555634 C6orf141Q5SZD1 244 aa9.92□□□□□ -0.82
SHMT2-220ENST00000555634 FBXW9Q5XUX1 488 aa9.92□□□□□ -0.82
SHMT2-220ENST00000555634 KLHL24Q6TFL4 600 aa9.92□□□□□ -0.82
SHMT2-220ENST00000555634 C3P1Q6ZMU1 363 aa9.92□□□□□ -0.82
SHMT2-220ENST00000555634 BEND4Q6ZU67 534 aa9.92□□□□□ -0.82
SHMT2-220ENST00000555634 LSRQ86X29 649 aaPredicted RBP9.92□□□□□ -0.82
SHMT2-220ENST00000555634 C20orf196Q8IYI0 205 aa9.92□□□□□ -0.82
SHMT2-220ENST00000555634 ZNF540Q8NDQ6 660 aa9.92□□□□□ -0.82
SHMT2-220ENST00000555634 NSMAFQ92636 917 aa9.92□□□□□ -0.82
SHMT2-220ENST00000555634 TMEM54Q969K7 222 aa9.92□□□□□ -0.82
SHMT2-220ENST00000555634 ZNF775Q96BV0 537 aaPredicted RBP9.92□□□□□ -0.82
SHMT2-220ENST00000555634 ZNF582Q96NG8 517 aaPredicted RBP9.92□□□□□ -0.82
SHMT2-220ENST00000555634 INTS14Q96SY0 518 aa9.92□□□□□ -0.82
SHMT2-220ENST00000555634 MNTQ99583 582 aa9.92□□□□□ -0.82
SHMT2-220ENST00000555634 RBM24Q9BX46 236 aaKnown RBP9.92□□□□□ -0.82
SHMT2-220ENST00000555634 MRPL13Q9BYD1 178 aaKnown RBP9.92□□□□□ -0.82
SHMT2-220ENST00000555634 NUAK2Q9H093 628 aa9.92□□□□□ -0.82
SHMT2-220ENST00000555634 SEC61A2Q9H9S3 476 aa9.92□□□□□ -0.82
SHMT2-220ENST00000555634 SRA1Q9HD15 236 aaKnown RBP9.92□□□□□ -0.82
SHMT2-220ENST00000555634 GALNT8Q9NY28 637 aa9.92□□□□□ -0.82
SHMT2-220ENST00000555634 CNOT2Q9NZN8 540 aaKnown RBP9.92□□□□□ -0.82
SHMT2-220ENST00000555634 KCNG2Q9UJ96 466 aa9.92□□□□□ -0.82
SHMT2-220ENST00000555634 TMEM14AQ9Y6G1 99 aa9.92□□□□□ -0.82
SHMT2-220ENST00000555634 NBEAQ8NFP9 2946 aa9.92□□□□□ -0.82
SHMT2-220ENST00000555634 IGSF10Q6WRI0 2623 aa9.91□□□□□ -0.82
SHMT2-220ENST00000555634 INTS1Q8N201 2190 aaKnown RBP9.91□□□□□ -0.82
SHMT2-220ENST00000555634 EEF1E1-BLOC1S5C9J1V9 151 aa9.91□□□□□ -0.82
SHMT2-220ENST00000555634 E9PQ18 207 aa9.91□□□□□ -0.82
SHMT2-220ENST00000555634 ZNHIT1O43257 154 aa9.91□□□□□ -0.82
SHMT2-220ENST00000555634 DHHO43323 396 aa9.91□□□□□ -0.82
SHMT2-220ENST00000555634 EEF1E1O43324 174 aaKnown RBP9.91□□□□□ -0.82
SHMT2-220ENST00000555634 IL18BPO95998 194 aa9.91□□□□□ -0.82
SHMT2-220ENST00000555634 GYPBP06028 91 aa9.91□□□□□ -0.82
SHMT2-220ENST00000555634 STSP08842 583 aa9.91□□□□□ -0.82
SHMT2-220ENST00000555634 GLI4P10075 376 aa9.91□□□□□ -0.82
SHMT2-220ENST00000555634 PIPP12273 146 aaPredicted RBP9.91□□□□□ -0.82
SHMT2-220ENST00000555634 GSTT1P30711 240 aa9.91□□□□□ -0.82
SHMT2-220ENST00000555634 NUDT6P53370 316 aa9.91□□□□□ -0.82
SHMT2-220ENST00000555634 ADAM8P78325 824 aa9.91□□□□□ -0.82
SHMT2-220ENST00000555634 ROR2Q01974 943 aaKnown RBP9.91□□□□□ -0.82
SHMT2-220ENST00000555634 FMODQ06828 376 aa9.91□□□□□ -0.82
SHMT2-220ENST00000555634 GGTLC2Q14390 218 aa9.91□□□□□ -0.82
SHMT2-220ENST00000555634 KCTD21Q4G0X4 260 aa9.91□□□□□ -0.82
SHMT2-220ENST00000555634 C10orf128Q5T292 105 aa9.91□□□□□ -0.82
SHMT2-220ENST00000555634 PLXDC2Q6UX71 529 aa9.91□□□□□ -0.82
SHMT2-220ENST00000555634 AHSA2Q719I0 299 aa9.91□□□□□ -0.82
SHMT2-220ENST00000555634 DPPA2Q7Z7J5 298 aa9.91□□□□□ -0.82
SHMT2-220ENST00000555634 ZBTB46Q86UZ6 589 aa9.91□□□□□ -0.82
SHMT2-220ENST00000555634 CCDC71Q8IV32 467 aaPredicted RBP9.91□□□□□ -0.82
SHMT2-220ENST00000555634 ERI1Q8IV48 349 aaKnown RBP9.91□□□□□ -0.82
SHMT2-220ENST00000555634 SVOPQ8N4V2 548 aa9.91□□□□□ -0.82
SHMT2-220ENST00000555634 ZIC4Q8N9L1 334 aa9.91□□□□□ -0.82
SHMT2-220ENST00000555634 OR51G2Q8NGK0 314 aa9.91□□□□□ -0.82
SHMT2-220ENST00000555634 OR2AJ1Q8NGZ0 328 aa9.91□□□□□ -0.82
SHMT2-220ENST00000555634 ASB5Q8WWX0 329 aa9.91□□□□□ -0.82
SHMT2-220ENST00000555634 MCHR2Q969V1 340 aa9.91□□□□□ -0.82
SHMT2-220ENST00000555634 RNFT2Q96EX2 444 aa9.91□□□□□ -0.82
SHMT2-220ENST00000555634 COPS4Q9BT78 406 aa9.91□□□□□ -0.82
SHMT2-220ENST00000555634 CDADC1Q9BWV3 514 aa9.91□□□□□ -0.82
SHMT2-220ENST00000555634 NELFAQ9H3P2 528 aa9.91□□□□□ -0.82
SHMT2-220ENST00000555634 MED20Q9H944 212 aa9.91□□□□□ -0.82
SHMT2-220ENST00000555634 CRLF2Q9HC73 371 aa9.91□□□□□ -0.82
SHMT2-220ENST00000555634 INPP5EQ9NRR6 644 aa9.91□□□□□ -0.82
SHMT2-220ENST00000555634 MALT1Q9UDY8 824 aa9.91□□□□□ -0.82
SHMT2-220ENST00000555634 ZNF629Q9UEG4 869 aaPredicted RBP9.91□□□□□ -0.82
SHMT2-220ENST00000555634 MEMO1Q9Y316 297 aa9.91□□□□□ -0.82
SHMT2-220ENST00000555634 LAMA5O15230 3695 aa9.91□□□□□ -0.82
SHMT2-220ENST00000555634 CIB4A0PJX0 185 aa9.9□□□□□ -0.82
SHMT2-220ENST00000555634 C12orf71A8MTZ7 269 aa9.9□□□□□ -0.82
SHMT2-220ENST00000555634 ZNF99A8MXY4 864 aaPredicted RBP9.9□□□□□ -0.82
SHMT2-220ENST00000555634 MYL12BO14950 172 aa9.9□□□□□ -0.82
SHMT2-220ENST00000555634 RGS10O43665 173 aa9.9□□□□□ -0.82
SHMT2-220ENST00000555634 IGHV3-9P01782 118 aa9.9□□□□□ -0.82
SHMT2-220ENST00000555634 HRGP04196 525 aa9.9□□□□□ -0.82
SHMT2-220ENST00000555634 SPARCP09486 303 aa9.9□□□□□ -0.82
SHMT2-220ENST00000555634 CD8BP10966 210 aa9.9□□□□□ -0.82
SHMT2-220ENST00000555634 CTLA4P16410 223 aa9.9□□□□□ -0.82
SHMT2-220ENST00000555634 GABRB1P18505 474 aa9.9□□□□□ -0.82
SHMT2-220ENST00000555634 MSR1P21757 451 aa9.9□□□□□ -0.82
SHMT2-220ENST00000555634 BMP5P22003 454 aa9.9□□□□□ -0.82
SHMT2-220ENST00000555634 LAP3P28838 519 aa9.9□□□□□ -0.82
SHMT2-220ENST00000555634 PYCR1P32322 319 aa9.9□□□□□ -0.82
SHMT2-220ENST00000555634 PCBD1P61457 104 aa9.9□□□□□ -0.82
SHMT2-220ENST00000555634 ACTA2P62736 377 aa9.9□□□□□ -0.82
SHMT2-220ENST00000555634 ACTG2P63267 376 aa9.9□□□□□ -0.82
SHMT2-220ENST00000555634 FAPQ12884 760 aa9.9□□□□□ -0.82
SHMT2-220ENST00000555634 HIST3H3Q16695 136 aa9.9□□□□□ -0.82
SHMT2-220ENST00000555634 NRN1LQ496H8 165 aa9.9□□□□□ -0.82
SHMT2-220ENST00000555634 AADACL4Q5VUY2 407 aa9.9□□□□□ -0.82
SHMT2-220ENST00000555634 RTL6Q6ICC9 239 aa9.9□□□□□ -0.82
SHMT2-220ENST00000555634 TFAP2EQ6VUC0 442 aa9.9□□□□□ -0.82
SHMT2-220ENST00000555634 Q6ZT83 130 aa9.9□□□□□ -0.82
SHMT2-220ENST00000555634 SHFQ7M4L6 423 aa9.9□□□□□ -0.82
SHMT2-220ENST00000555634 FAM220AQ7Z4H9 259 aa9.9□□□□□ -0.82
SHMT2-220ENST00000555634 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.9□□□□□ -0.82
SHMT2-220ENST00000555634 MRGPRGQ86SM5 289 aa9.9□□□□□ -0.82
SHMT2-220ENST00000555634 BBS1Q8NFJ9 593 aa9.9□□□□□ -0.82
SHMT2-220ENST00000555634 OR6N2Q8NGY6 317 aa9.9□□□□□ -0.82
SHMT2-220ENST00000555634 FBLIM1Q8WUP2 373 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 156.6 ms