RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 SORL1Q92673 2214 aa1.28□□□□□ -2.2
SNX6-204ENST00000555541 A0A1B0GW55 424 aa1.28□□□□□ -2.2
SNX6-204ENST00000555541 UBXN8O00124 270 aa1.28□□□□□ -2.2
SNX6-204ENST00000555541 DUX4L2P0CJ85 424 aa1.28□□□□□ -2.2
SNX6-204ENST00000555541 DUX4L3P0CJ86 424 aa1.28□□□□□ -2.2
SNX6-204ENST00000555541 DUX4L5P0CJ88 424 aa1.28□□□□□ -2.2
SNX6-204ENST00000555541 DUX4L6P0CJ89 424 aa1.28□□□□□ -2.2
SNX6-204ENST00000555541 DUX4L7P0CJ90 424 aa1.28□□□□□ -2.2
SNX6-204ENST00000555541 RDXP35241 583 aaKnown RBP1.28□□□□□ -2.2
SNX6-204ENST00000555541 HRH1P35367 487 aa1.28□□□□□ -2.2
SNX6-204ENST00000555541 CHI3L1P36222 383 aaPredicted RBP1.28□□□□□ -2.2
SNX6-204ENST00000555541 FDFT1P37268 417 aa1.28□□□□□ -2.2
SNX6-204ENST00000555541 RFX3P48380 749 aa1.28□□□□□ -2.2
SNX6-204ENST00000555541 IRX3P78415 501 aaPredicted RBP1.28□□□□□ -2.2
SNX6-204ENST00000555541 IL1RL1Q01638 556 aa1.28□□□□□ -2.2
SNX6-204ENST00000555541 OGDHQ02218 1023 aa1.28□□□□□ -2.2
SNX6-204ENST00000555541 BAMBIQ13145 260 aa1.28□□□□□ -2.2
SNX6-204ENST00000555541 MAB21L1Q13394 359 aa1.28□□□□□ -2.2
SNX6-204ENST00000555541 KLHL38Q2WGJ6 581 aa1.28□□□□□ -2.2
SNX6-204ENST00000555541 FILIP1LQ4L180 1135 aa1.28□□□□□ -2.2
SNX6-204ENST00000555541 DNAJC24Q6P3W2 148 aa1.28□□□□□ -2.2
SNX6-204ENST00000555541 SPINT4Q6UDR6 99 aa1.28□□□□□ -2.2
SNX6-204ENST00000555541 HDDC2Q7Z4H3 204 aa1.28□□□□□ -2.2
SNX6-204ENST00000555541 CEP112Q8N8E3 955 aa1.28□□□□□ -2.2
SNX6-204ENST00000555541 ST20-AS1Q8NBB2 130 aa1.28□□□□□ -2.2
SNX6-204ENST00000555541 CIRBP-AS1Q8TBR5 109 aa1.28□□□□□ -2.2
SNX6-204ENST00000555541 OR8B4Q96RC9 309 aa1.28□□□□□ -2.2
SNX6-204ENST00000555541 SLC25A2Q9BXI2 301 aa1.28□□□□□ -2.2
SNX6-204ENST00000555541 RWDD1Q9H446 243 aaPredicted RBP1.28□□□□□ -2.2
SNX6-204ENST00000555541 SAV1Q9H4B6 383 aaPredicted RBP1.28□□□□□ -2.2
SNX6-204ENST00000555541 PALMDQ9NP74 551 aa1.28□□□□□ -2.2
SNX6-204ENST00000555541 KLHL28Q9NXS3 571 aa1.28□□□□□ -2.2
SNX6-204ENST00000555541 ACTR3BQ9P1U1 418 aa1.28□□□□□ -2.2
SNX6-204ENST00000555541 DUX4Q9UBX2 424 aa1.28□□□□□ -2.2
SNX6-204ENST00000555541 MRPS18BQ9Y676 258 aaKnown RBP1.28□□□□□ -2.2
SNX6-204ENST00000555541 PLXNB1O43157 2135 aa1.27□□□□□ -2.21
SNX6-204ENST00000555541 AHDC1Q5TGY3 1603 aaPredicted RBP1.27□□□□□ -2.21
SNX6-204ENST00000555541 UTS2O95399 124 aa1.27□□□□□ -2.21
SNX6-204ENST00000555541 IGHV2-5P01817 119 aa1.27□□□□□ -2.21
SNX6-204ENST00000555541 IGHDP01880 384 aa1.27□□□□□ -2.21
SNX6-204ENST00000555541 EPB41P11171 864 aaKnown RBP1.27□□□□□ -2.21
SNX6-204ENST00000555541 NCF1P14598 390 aaPredicted RBP1.27□□□□□ -2.21
SNX6-204ENST00000555541 SERPINB5P36952 375 aa1.27□□□□□ -2.21
SNX6-204ENST00000555541 AQP2P41181 271 aa1.27□□□□□ -2.21
SNX6-204ENST00000555541 DUSP3P51452 185 aaPredicted RBP1.27□□□□□ -2.21
SNX6-204ENST00000555541 UGT2B15P54855 530 aa1.27□□□□□ -2.21
SNX6-204ENST00000555541 ZNF92Q03936 586 aa1.27□□□□□ -2.21
SNX6-204ENST00000555541 KRTAP13-4Q3LI77 160 aa1.27□□□□□ -2.21
SNX6-204ENST00000555541 KCTD21Q4G0X4 260 aa1.27□□□□□ -2.21
SNX6-204ENST00000555541 TTC23Q5W5X9 447 aa1.27□□□□□ -2.21
SNX6-204ENST00000555541 PUSL1Q8N0Z8 303 aaKnown RBP1.27□□□□□ -2.21
SNX6-204ENST00000555541 OR4K5Q8NGD3 323 aa1.27□□□□□ -2.21
SNX6-204ENST00000555541 MAGEE2Q8TD90 523 aaPredicted RBP1.27□□□□□ -2.21
SNX6-204ENST00000555541 FLYWCH2Q96CP2 140 aaKnown RBP1.27□□□□□ -2.21
SNX6-204ENST00000555541 SORT1Q99523 831 aa1.27□□□□□ -2.21
SNX6-204ENST00000555541 RARRES2Q99969 163 aa1.27□□□□□ -2.21
SNX6-204ENST00000555541 KCTD14Q9BQ13 255 aaPredicted RBP1.27□□□□□ -2.21
SNX6-204ENST00000555541 TMEM59Q9BXS4 323 aa1.27□□□□□ -2.21
SNX6-204ENST00000555541 FBXO6Q9NRD1 293 aaPredicted RBP1.27□□□□□ -2.21
SNX6-204ENST00000555541 DHCR7Q9UBM7 475 aaKnown RBP1.27□□□□□ -2.21
SNX6-204ENST00000555541 RNF14Q9UBS8 474 aa1.27□□□□□ -2.21
SNX6-204ENST00000555541 CTSFQ9UBX1 484 aa1.27□□□□□ -2.21
SNX6-204ENST00000555541 IGHV3OR16-8A0A075B7F1 116 aa1.26□□□□□ -2.21
SNX6-204ENST00000555541 A0A1W2PNN7 141 aa1.26□□□□□ -2.21
SNX6-204ENST00000555541 MBLAC1A4D2B0 266 aaPredicted RBP1.26□□□□□ -2.21
SNX6-204ENST00000555541 RAB3DO95716 219 aa1.26□□□□□ -2.21
SNX6-204ENST00000555541 GLAP06280 429 aa1.26□□□□□ -2.21
SNX6-204ENST00000555541 ZNF806P0C7X5 589 aa1.26□□□□□ -2.21
SNX6-204ENST00000555541 UBTFL6P0CB48 400 aaPredicted RBP1.26□□□□□ -2.21
SNX6-204ENST00000555541 CEACAM6P40199 344 aa1.26□□□□□ -2.21
SNX6-204ENST00000555541 MDH1P40925 334 aaKnown RBP1.26□□□□□ -2.21
SNX6-204ENST00000555541 RORCP51449 518 aa1.26□□□□□ -2.21
SNX6-204ENST00000555541 ZNF138P52744 262 aa1.26□□□□□ -2.21
SNX6-204ENST00000555541 CBX1P83916 185 aa1.26□□□□□ -2.21
SNX6-204ENST00000555541 CDK16Q00536 496 aa1.26□□□□□ -2.21
SNX6-204ENST00000555541 PON2Q15165 354 aa1.26□□□□□ -2.21
SNX6-204ENST00000555541 RGNQ15493 299 aa1.26□□□□□ -2.21
SNX6-204ENST00000555541 TPD52L1Q16890 204 aaPredicted RBP1.26□□□□□ -2.21
SNX6-204ENST00000555541 SFT2D3Q587I9 215 aa1.26□□□□□ -2.21
SNX6-204ENST00000555541 AP1ARQ63HQ0 302 aa1.26□□□□□ -2.21
SNX6-204ENST00000555541 CNSTQ6PJW8 725 aa1.26□□□□□ -2.21
SNX6-204ENST00000555541 ARL9Q6T311 187 aa1.26□□□□□ -2.21
SNX6-204ENST00000555541 TMEM205Q6UW68 189 aa1.26□□□□□ -2.21
SNX6-204ENST00000555541 TEX43Q6ZNM6 134 aa1.26□□□□□ -2.21
SNX6-204ENST00000555541 ZNF664Q8N3J9 261 aa1.26□□□□□ -2.21
SNX6-204ENST00000555541 MFSD9Q8NBP5 474 aa1.26□□□□□ -2.21
SNX6-204ENST00000555541 TMEM104Q8NE00 496 aa1.26□□□□□ -2.21
SNX6-204ENST00000555541 C1orf64Q8NEQ6 169 aa1.26□□□□□ -2.21
SNX6-204ENST00000555541 OR9A2Q8NGT5 310 aa1.26□□□□□ -2.21
SNX6-204ENST00000555541 LILRB4Q8NHJ6 448 aa1.26□□□□□ -2.21
SNX6-204ENST00000555541 TMEM54Q969K7 222 aa1.26□□□□□ -2.21
SNX6-204ENST00000555541 SLC38A2Q96QD8 506 aa1.26□□□□□ -2.21
SNX6-204ENST00000555541 RPF2Q9H7B2 306 aaKnown RBP1.26□□□□□ -2.21
SNX6-204ENST00000555541 COQ10BQ9H8M1 238 aa1.26□□□□□ -2.21
SNX6-204ENST00000555541 FARSBQ9NSD9 589 aaKnown RBP1.26□□□□□ -2.21
SNX6-204ENST00000555541 SMOXQ9NWM0 555 aa1.26□□□□□ -2.21
SNX6-204ENST00000555541 ATP8B3O60423 1300 aa1.25□□□□□ -2.21
SNX6-204ENST00000555541 CDHR2Q9BYE9 1310 aa1.25□□□□□ -2.21
SNX6-204ENST00000555541 ZNF716A6NP11 495 aa1.25□□□□□ -2.21
SNX6-204ENST00000555541 DEDDO75618 318 aa1.25□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms