RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 ZNF584Q8IVC4 421 aa10.21□□□□□ -0.77
VRK1-204ENST00000555351 CDK20Q8IZL9 346 aa10.21□□□□□ -0.77
VRK1-204ENST00000555351 OR4K5Q8NGD3 323 aa10.21□□□□□ -0.77
VRK1-204ENST00000555351 HTRA1Q92743 480 aa10.21□□□□□ -0.77
VRK1-204ENST00000555351 ZNF347Q96SE7 839 aa10.21□□□□□ -0.77
VRK1-204ENST00000555351 KCNK17Q96T54 332 aa10.21□□□□□ -0.77
VRK1-204ENST00000555351 KCTD14Q9BQ13 255 aaPredicted RBP10.21□□□□□ -0.77
VRK1-204ENST00000555351 ELAC2Q9BQ52 826 aaKnown RBP10.21□□□□□ -0.77
VRK1-204ENST00000555351 WACQ9BTA9 647 aa10.21□□□□□ -0.77
VRK1-204ENST00000555351 KCNN2Q9H2S1 579 aa10.21□□□□□ -0.77
VRK1-204ENST00000555351 SPAG4Q9NPE6 437 aa10.21□□□□□ -0.77
VRK1-204ENST00000555351 MAN2C1Q9NTJ4 1040 aa10.21□□□□□ -0.77
VRK1-204ENST00000555351 M0R233 179 aa10.2□□□□□ -0.78
VRK1-204ENST00000555351 FFAR1O14842 300 aa10.2□□□□□ -0.78
VRK1-204ENST00000555351 ZNF682O95780 498 aa10.2□□□□□ -0.78
VRK1-204ENST00000555351 SERPINA1P01009 418 aa10.2□□□□□ -0.78
VRK1-204ENST00000555351 PSME3P61289 254 aa10.2□□□□□ -0.78
VRK1-204ENST00000555351 RPL27P61353 136 aaKnown RBP10.2□□□□□ -0.78
VRK1-204ENST00000555351 LSM11P83369 360 aaKnown RBP eCLIP10.2□□□□□ -0.78
VRK1-204ENST00000555351 PLP2Q04941 152 aa10.2□□□□□ -0.78
VRK1-204ENST00000555351 RUNX1T1Q06455 604 aa10.2□□□□□ -0.78
VRK1-204ENST00000555351 RAB39AQ14964 217 aa10.2□□□□□ -0.78
VRK1-204ENST00000555351 LAPTM4AQ15012 233 aa10.2□□□□□ -0.78
VRK1-204ENST00000555351 SPATS1Q496A3 300 aa10.2□□□□□ -0.78
VRK1-204ENST00000555351 C6orf52Q5T4I8 152 aa10.2□□□□□ -0.78
VRK1-204ENST00000555351 CYB5R2Q6BCY4 276 aa10.2□□□□□ -0.78
VRK1-204ENST00000555351 FKBP9P1Q75LS8 142 aa10.2□□□□□ -0.78
VRK1-204ENST00000555351 SLC16A14Q7RTX9 510 aa10.2□□□□□ -0.78
VRK1-204ENST00000555351 ALPK2Q86TB3 2170 aa10.2□□□□□ -0.78
VRK1-204ENST00000555351 NRMQ8IXM6 262 aa10.2□□□□□ -0.78
VRK1-204ENST00000555351 C1orf174Q8IYL3 243 aa10.2□□□□□ -0.78
VRK1-204ENST00000555351 ZNF786Q8N393 782 aa10.2□□□□□ -0.78
VRK1-204ENST00000555351 SVOPLQ8N434 492 aa10.2□□□□□ -0.78
VRK1-204ENST00000555351 SYT14Q8NB59 555 aa10.2□□□□□ -0.78
VRK1-204ENST00000555351 SLC30A7Q8NEW0 376 aa10.2□□□□□ -0.78
VRK1-204ENST00000555351 MOSPD2Q8NHP6 518 aa10.2□□□□□ -0.78
VRK1-204ENST00000555351 RBP7Q96R05 134 aa10.2□□□□□ -0.78
VRK1-204ENST00000555351 SH3GL3Q99963 347 aa10.2□□□□□ -0.78
VRK1-204ENST00000555351 NDEL1Q9GZM8 345 aa10.2□□□□□ -0.78
VRK1-204ENST00000555351 LRMDAQ9H2I8 198 aa10.2□□□□□ -0.78
VRK1-204ENST00000555351 DYNLRB1Q9NP97 96 aa10.2□□□□□ -0.78
VRK1-204ENST00000555351 GPR160Q9UJ42 338 aa10.2□□□□□ -0.78
VRK1-204ENST00000555351 ZNF346Q9UL40 294 aaKnown RBP10.2□□□□□ -0.78
VRK1-204ENST00000555351 SAMD4AQ9UPU9 718 aaKnown RBP10.2□□□□□ -0.78
VRK1-204ENST00000555351 TMEM5Q9Y2B1 443 aa10.2□□□□□ -0.78
VRK1-204ENST00000555351 ENPP4Q9Y6X5 453 aa10.2□□□□□ -0.78
VRK1-204ENST00000555351 CHD3Q12873 2000 aaKnown RBP10.19□□□□□ -0.78
VRK1-204ENST00000555351 A0A087WUU8 490 aa10.19□□□□□ -0.78
VRK1-204ENST00000555351 IQCMA0A1B0GVH7 501 aa10.19□□□□□ -0.78
VRK1-204ENST00000555351 A0A1W2PRQ8 180 aa10.19□□□□□ -0.78
VRK1-204ENST00000555351 EFCAB9A8MZ26 197 aa10.19□□□□□ -0.78
VRK1-204ENST00000555351 GPRIN2O60269 458 aa10.19□□□□□ -0.78
VRK1-204ENST00000555351 LY6HO94772 140 aa10.19□□□□□ -0.78
VRK1-204ENST00000555351 STAMBPO95630 424 aa10.19□□□□□ -0.78
VRK1-204ENST00000555351 IGFBP1P08833 259 aaPredicted RBP10.19□□□□□ -0.78
VRK1-204ENST00000555351 MMP7P09237 267 aaPredicted RBP10.19□□□□□ -0.78
VRK1-204ENST00000555351 SAGP10523 405 aaPredicted RBP10.19□□□□□ -0.78
VRK1-204ENST00000555351 DAOP14920 347 aa10.19□□□□□ -0.78
VRK1-204ENST00000555351 MAKP20794 623 aa10.19□□□□□ -0.78
VRK1-204ENST00000555351 DRD4P21917 467 aa10.19□□□□□ -0.78
VRK1-204ENST00000555351 RAD52P43351 418 aa10.19□□□□□ -0.78
VRK1-204ENST00000555351 SELENOVP59797 346 aa10.19□□□□□ -0.78
VRK1-204ENST00000555351 MRPS11P82912 194 aaKnown RBP10.19□□□□□ -0.78
VRK1-204ENST00000555351 FHL1Q13642 323 aa10.19□□□□□ -0.78
VRK1-204ENST00000555351 DGCR6Q14129 220 aa10.19□□□□□ -0.78
VRK1-204ENST00000555351 TBC1D28Q2M2D7 210 aa10.19□□□□□ -0.78
VRK1-204ENST00000555351 GKAP1Q5VSY0 366 aaPredicted RBP10.19□□□□□ -0.78
VRK1-204ENST00000555351 FAM27BQ5VT28 67 aa10.19□□□□□ -0.78
VRK1-204ENST00000555351 SLC25A47Q6Q0C1 308 aa10.19□□□□□ -0.78
VRK1-204ENST00000555351 UGT2A3Q6UWM9 527 aa10.19□□□□□ -0.78
VRK1-204ENST00000555351 UNQ6126/PRO20091Q6UXV3 157 aa10.19□□□□□ -0.78
VRK1-204ENST00000555351 ZNF730Q6ZMV8 503 aa10.19□□□□□ -0.78
VRK1-204ENST00000555351 FOXL2NBQ6ZUU3 175 aa10.19□□□□□ -0.78
VRK1-204ENST00000555351 RRM2BQ7LG56 351 aa10.19□□□□□ -0.78
VRK1-204ENST00000555351 SYT9Q86SS6 491 aa10.19□□□□□ -0.78
VRK1-204ENST00000555351 OAFQ86UD1 273 aa10.19□□□□□ -0.78
VRK1-204ENST00000555351 PRIMA1Q86XR5 153 aa10.19□□□□□ -0.78
VRK1-204ENST00000555351 ARIH2OSQ8N7S6 290 aa10.19□□□□□ -0.78
VRK1-204ENST00000555351 ANKS4BQ8N8V4 417 aa10.19□□□□□ -0.78
VRK1-204ENST00000555351 LRRC75AQ8NAA5 344 aa10.19□□□□□ -0.78
VRK1-204ENST00000555351 RBM15BQ8NDT2 890 aaKnown RBP10.19□□□□□ -0.78
VRK1-204ENST00000555351 FGFBP3Q8TAT2 258 aa10.19□□□□□ -0.78
VRK1-204ENST00000555351 HDAC2Q92769 488 aaKnown RBP10.19□□□□□ -0.78
VRK1-204ENST00000555351 FAM162AQ96A26 154 aa10.19□□□□□ -0.78
VRK1-204ENST00000555351 HSH2DQ96JZ2 352 aa10.19□□□□□ -0.78
VRK1-204ENST00000555351 FOXN4Q96NZ1 517 aa10.19□□□□□ -0.78
VRK1-204ENST00000555351 MRPL37Q9BZE1 423 aaKnown RBP10.19□□□□□ -0.78
VRK1-204ENST00000555351 BCL2L14Q9BZR8 327 aa10.19□□□□□ -0.78
VRK1-204ENST00000555351 GORASP2Q9H8Y8 452 aa10.19□□□□□ -0.78
VRK1-204ENST00000555351 RNF121Q9H920 327 aa10.19□□□□□ -0.78
VRK1-204ENST00000555351 NMNAT1Q9HAN9 279 aaPredicted RBP10.19□□□□□ -0.78
VRK1-204ENST00000555351 YAE1D1Q9NRH1 226 aa10.19□□□□□ -0.78
VRK1-204ENST00000555351 DCAF13Q9NV06 445 aaKnown RBP10.19□□□□□ -0.78
VRK1-204ENST00000555351 LPAR3Q9UBY5 353 aa10.19□□□□□ -0.78
VRK1-204ENST00000555351 CDC42EP3Q9UKI2 254 aa10.19□□□□□ -0.78
VRK1-204ENST00000555351 UGT2A1Q9Y4X1 527 aa10.19□□□□□ -0.78
VRK1-204ENST00000555351 SNX13Q9Y5W8 968 aa10.19□□□□□ -0.78
VRK1-204ENST00000555351 YLPM1P49750 1951 aaKnown RBP10.18□□□□□ -0.78
VRK1-204ENST00000555351 PIP5K1CO60331 668 aa10.18□□□□□ -0.78
VRK1-204ENST00000555351 ICMTO60725 284 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms