RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 ZFP57Q9NU63 452 aa9.71□□□□□ -0.85
MTHFD1-210ENST00000555252 C2orf42Q9NWW7 574 aa9.71□□□□□ -0.85
MTHFD1-210ENST00000555252 ZNF629Q9UEG4 869 aaPredicted RBP9.71□□□□□ -0.85
MTHFD1-210ENST00000555252 PLEKHA6Q9Y2H5 1048 aa9.71□□□□□ -0.85
MTHFD1-210ENST00000555252 MRPS2Q9Y399 296 aaKnown RBP9.71□□□□□ -0.85
MTHFD1-210ENST00000555252 CHD9Q3L8U1 2897 aa9.71□□□□□ -0.85
MTHFD1-210ENST00000555252 TRBV5-7A0A0A0MS05 114 aa9.71□□□□□ -0.86
MTHFD1-210ENST00000555252 PRAMEF26H0Y7S4 382 aa9.71□□□□□ -0.86
MTHFD1-210ENST00000555252 OR10H2O60403 315 aa9.71□□□□□ -0.86
MTHFD1-210ENST00000555252 CDC40O60508 579 aaKnown RBP eCLIP9.71□□□□□ -0.86
MTHFD1-210ENST00000555252 GLCEO94923 617 aa9.71□□□□□ -0.86
MTHFD1-210ENST00000555252 ANXA2P07355 339 aaKnown RBP9.71□□□□□ -0.86
MTHFD1-210ENST00000555252 OR4E1P0C645 316 aa9.71□□□□□ -0.86
MTHFD1-210ENST00000555252 GTF2F2P13984 249 aa9.71□□□□□ -0.86
MTHFD1-210ENST00000555252 FOLR2P14207 255 aa9.71□□□□□ -0.86
MTHFD1-210ENST00000555252 HIST1H1CP16403 213 aaKnown RBP9.71□□□□□ -0.86
MTHFD1-210ENST00000555252 ACHEP22303 614 aa9.71□□□□□ -0.86
MTHFD1-210ENST00000555252 PRSS3P35030 304 aa9.71□□□□□ -0.86
MTHFD1-210ENST00000555252 NAA10P41227 235 aaPredicted RBP9.71□□□□□ -0.86
MTHFD1-210ENST00000555252 CLDN12P56749 244 aa9.71□□□□□ -0.86
MTHFD1-210ENST00000555252 NAAAQ02083 359 aa9.71□□□□□ -0.86
MTHFD1-210ENST00000555252 ALKBH1Q13686 389 aaKnown RBP9.71□□□□□ -0.86
MTHFD1-210ENST00000555252 MELKQ14680 651 aa9.71□□□□□ -0.86
MTHFD1-210ENST00000555252 SHHQ15465 462 aa9.71□□□□□ -0.86
MTHFD1-210ENST00000555252 RAB30Q15771 203 aa9.71□□□□□ -0.86
MTHFD1-210ENST00000555252 AVPI1Q5T686 147 aa9.71□□□□□ -0.86
MTHFD1-210ENST00000555252 FCRLBQ6BAA4 426 aa9.71□□□□□ -0.86
MTHFD1-210ENST00000555252 ARMC6Q6NXE6 501 aa9.71□□□□□ -0.86
MTHFD1-210ENST00000555252 STEAP1BQ6NZ63 245 aa9.71□□□□□ -0.86
MTHFD1-210ENST00000555252 FIGNL1Q6PIW4 674 aa9.71□□□□□ -0.86
MTHFD1-210ENST00000555252 ZNF550Q7Z398 422 aa9.71□□□□□ -0.86
MTHFD1-210ENST00000555252 ZNF595Q8IYB9 648 aa9.71□□□□□ -0.86
MTHFD1-210ENST00000555252 TMEM52Q8NDY8 209 aa9.71□□□□□ -0.86
MTHFD1-210ENST00000555252 SDR9C7Q8NEX9 313 aa9.71□□□□□ -0.86
MTHFD1-210ENST00000555252 OR51S1Q8NGJ8 323 aa9.71□□□□□ -0.86
MTHFD1-210ENST00000555252 OR5AK2Q8NH90 309 aa9.71□□□□□ -0.86
MTHFD1-210ENST00000555252 ADAMTS18Q8TE60 1221 aa9.71□□□□□ -0.86
MTHFD1-210ENST00000555252 ARL11Q969Q4 196 aa9.71□□□□□ -0.86
MTHFD1-210ENST00000555252 ANKRD9Q96BM1 317 aaPredicted RBP9.71□□□□□ -0.86
MTHFD1-210ENST00000555252 SEC11CQ9BY50 192 aa9.71□□□□□ -0.86
MTHFD1-210ENST00000555252 CDV3Q9UKY7 258 aaKnown RBP9.71□□□□□ -0.86
MTHFD1-210ENST00000555252 CDH23Q9H251 3354 aa9.71□□□□□ -0.86
MTHFD1-210ENST00000555252 TMEM82A0PJX8 343 aa9.7□□□□□ -0.86
MTHFD1-210ENST00000555252 CTAG2O75638 210 aa9.7□□□□□ -0.86
MTHFD1-210ENST00000555252 NAT2P11245 290 aa9.7□□□□□ -0.86
MTHFD1-210ENST00000555252 LSSP48449 732 aa9.7□□□□□ -0.86
MTHFD1-210ENST00000555252 LUMP51884 338 aaPredicted RBP9.7□□□□□ -0.86
MTHFD1-210ENST00000555252 HCCSP53701 268 aa9.7□□□□□ -0.86
MTHFD1-210ENST00000555252 RPS15P62841 145 aaKnown RBP9.7□□□□□ -0.86
MTHFD1-210ENST00000555252 CXADRP78310 365 aa9.7□□□□□ -0.86
MTHFD1-210ENST00000555252 EXOSC7Q15024 291 aaKnown RBP9.7□□□□□ -0.86
MTHFD1-210ENST00000555252 LINC00114Q6XXX2 140 aa9.7□□□□□ -0.86
MTHFD1-210ENST00000555252 C7orf57Q8NEG2 295 aa9.7□□□□□ -0.86
MTHFD1-210ENST00000555252 STEAP2Q8NFT2 490 aa9.7□□□□□ -0.86
MTHFD1-210ENST00000555252 GPR148Q8TDV2 347 aa9.7□□□□□ -0.86
MTHFD1-210ENST00000555252 GPX8Q8TED1 209 aa9.7□□□□□ -0.86
MTHFD1-210ENST00000555252 HSPA12BQ96MM6 686 aa9.7□□□□□ -0.86
MTHFD1-210ENST00000555252 VRK1Q99986 396 aaPredicted RBP9.7□□□□□ -0.86
MTHFD1-210ENST00000555252 SEMA6CQ9H3T2 930 aa9.7□□□□□ -0.86
MTHFD1-210ENST00000555252 CCDC86Q9H6F5 360 aaKnown RBP9.7□□□□□ -0.86
MTHFD1-210ENST00000555252 TMEM185BQ9H7F4 350 aa9.7□□□□□ -0.86
MTHFD1-210ENST00000555252 TMEM74BQ9NUR3 256 aa9.7□□□□□ -0.86
MTHFD1-210ENST00000555252 FBXO34Q9NWN3 711 aa9.7□□□□□ -0.86
MTHFD1-210ENST00000555252 PCDHB10Q9UN67 800 aa9.7□□□□□ -0.86
MTHFD1-210ENST00000555252 MOKQ9UQ07 419 aa9.7□□□□□ -0.86
MTHFD1-210ENST00000555252 EPOPA6NHQ4 379 aa9.7□□□□□ -0.86
MTHFD1-210ENST00000555252 C10orf142B7Z368 130 aa9.7□□□□□ -0.86
MTHFD1-210ENST00000555252 GNB5O14775 395 aa9.7□□□□□ -0.86
MTHFD1-210ENST00000555252 MAGEB4O15481 346 aaPredicted RBP9.7□□□□□ -0.86
MTHFD1-210ENST00000555252 SEMA4FO95754 770 aa9.7□□□□□ -0.86
MTHFD1-210ENST00000555252 CT62P0C5K7 136 aa9.7□□□□□ -0.86
MTHFD1-210ENST00000555252 PVRP15151 417 aa9.7□□□□□ -0.86
MTHFD1-210ENST00000555252 SPI1P17947 270 aa9.7□□□□□ -0.86
MTHFD1-210ENST00000555252 ADRA2CP18825 462 aa9.7□□□□□ -0.86
MTHFD1-210ENST00000555252 PSMB10P40306 273 aa9.7□□□□□ -0.86
MTHFD1-210ENST00000555252 CCR5P51681 352 aa9.7□□□□□ -0.86
MTHFD1-210ENST00000555252 SLC25A1P53007 311 aa9.7□□□□□ -0.86
MTHFD1-210ENST00000555252 NANOS3P60323 173 aaKnown RBP9.7□□□□□ -0.86
MTHFD1-210ENST00000555252 PNLIPRP3Q17RR3 467 aa9.7□□□□□ -0.86
MTHFD1-210ENST00000555252 TMEM205Q6UW68 189 aa9.7□□□□□ -0.86
MTHFD1-210ENST00000555252 IL34Q6ZMJ4 242 aa9.7□□□□□ -0.86
MTHFD1-210ENST00000555252 SLC16A9Q7RTY1 509 aa9.7□□□□□ -0.86
MTHFD1-210ENST00000555252 PRSS41Q7RTY9 318 aa9.7□□□□□ -0.86
MTHFD1-210ENST00000555252 TMPRSS12Q86WS5 348 aa9.7□□□□□ -0.86
MTHFD1-210ENST00000555252 ARL14Q8N4G2 192 aa9.7□□□□□ -0.86
MTHFD1-210ENST00000555252 NPEPL1Q8NDH3 523 aa9.7□□□□□ -0.86
MTHFD1-210ENST00000555252 OR52R1Q8NGF1 315 aa9.7□□□□□ -0.86
MTHFD1-210ENST00000555252 OR5T3Q8NGG3 340 aa9.7□□□□□ -0.86
MTHFD1-210ENST00000555252 OR4K13Q8NH42 304 aa9.7□□□□□ -0.86
MTHFD1-210ENST00000555252 ELP5Q8TE02 316 aa9.7□□□□□ -0.86
MTHFD1-210ENST00000555252 SFT2D1Q8WV19 159 aa9.7□□□□□ -0.86
MTHFD1-210ENST00000555252 CCDC74AQ96AQ1 378 aa9.7□□□□□ -0.86
MTHFD1-210ENST00000555252 GPX7Q96SL4 187 aaPredicted RBP9.7□□□□□ -0.86
MTHFD1-210ENST00000555252 EDEM2Q9BV94 578 aa9.7□□□□□ -0.86
MTHFD1-210ENST00000555252 ZNF471Q9BX82 626 aaPredicted RBP9.7□□□□□ -0.86
MTHFD1-210ENST00000555252 POFUT1Q9H488 388 aa9.7□□□□□ -0.86
MTHFD1-210ENST00000555252 RNF122Q9H9V4 155 aa9.7□□□□□ -0.86
MTHFD1-210ENST00000555252 TMEM100Q9NV29 134 aa9.7□□□□□ -0.86
MTHFD1-210ENST00000555252 CLEC1BQ9P126 229 aa9.7□□□□□ -0.86
MTHFD1-210ENST00000555252 MYEF2Q9P2K5 600 aaKnown RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms