RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 PSMG2Q969U7 264 aa4.09□□□□□ -1.75
VRK1-203ENST00000555067 PAGE5Q96GU1 130 aa4.09□□□□□ -1.75
VRK1-203ENST00000555067 ZNF514Q96K75 400 aaPredicted RBP4.09□□□□□ -1.75
VRK1-203ENST00000555067 PARLQ9H300 379 aa4.09□□□□□ -1.75
VRK1-203ENST00000555067 PANK3Q9H999 370 aa4.09□□□□□ -1.75
VRK1-203ENST00000555067 OR2S2Q9NQN1 319 aa4.09□□□□□ -1.75
VRK1-203ENST00000555067 CLEC5AQ9NY25 188 aa4.09□□□□□ -1.75
VRK1-203ENST00000555067 SLC17A7Q9P2U7 560 aa4.09□□□□□ -1.75
VRK1-203ENST00000555067 B4GALT7Q9UBV7 327 aa4.09□□□□□ -1.75
VRK1-203ENST00000555067 PRODH2Q9UF12 536 aa4.09□□□□□ -1.75
VRK1-203ENST00000555067 RSPH14Q9UHP6 348 aa4.09□□□□□ -1.75
VRK1-203ENST00000555067 PPIL1Q9Y3C6 166 aa4.09□□□□□ -1.75
VRK1-203ENST00000555067 AUP1Q9Y679 476 aa4.09□□□□□ -1.75
VRK1-203ENST00000555067 IGHV3OR16-10A0A075B7F0 116 aa4.08□□□□□ -1.76
VRK1-203ENST00000555067 IGKV1D-8A0A087WSZ0 117 aa4.08□□□□□ -1.76
VRK1-203ENST00000555067 C1orf232A0A0U1RR37 186 aa4.08□□□□□ -1.76
VRK1-203ENST00000555067 A0A1B0GW55 424 aa4.08□□□□□ -1.76
VRK1-203ENST00000555067 A0A1W2PRF3 423 aa4.08□□□□□ -1.76
VRK1-203ENST00000555067 A0A1W2PRM7 423 aa4.08□□□□□ -1.76
VRK1-203ENST00000555067 E7ENQ6 273 aa4.08□□□□□ -1.76
VRK1-203ENST00000555067 LOC110117498-PIK3R3F6TDL0 507 aa4.08□□□□□ -1.76
VRK1-203ENST00000555067 PDHXO00330 501 aa4.08□□□□□ -1.76
VRK1-203ENST00000555067 PLPP1O14494 284 aa4.08□□□□□ -1.76
VRK1-203ENST00000555067 TOR1AO14656 332 aa4.08□□□□□ -1.76
VRK1-203ENST00000555067 EEDO75530 441 aaKnown RBP4.08□□□□□ -1.76
VRK1-203ENST00000555067 CRTAPO75718 401 aaPredicted RBP4.08□□□□□ -1.76
VRK1-203ENST00000555067 SEMA4FO95754 770 aa4.08□□□□□ -1.76
VRK1-203ENST00000555067 ACSM4P0C7M7 580 aa4.08□□□□□ -1.76
VRK1-203ENST00000555067 DUX4L2P0CJ85 424 aa4.08□□□□□ -1.76
VRK1-203ENST00000555067 DUX4L3P0CJ86 424 aa4.08□□□□□ -1.76
VRK1-203ENST00000555067 DUX4L4P0CJ87 422 aa4.08□□□□□ -1.76
VRK1-203ENST00000555067 DUX4L5P0CJ88 424 aa4.08□□□□□ -1.76
VRK1-203ENST00000555067 DUX4L6P0CJ89 424 aa4.08□□□□□ -1.76
VRK1-203ENST00000555067 DUX4L7P0CJ90 424 aa4.08□□□□□ -1.76
VRK1-203ENST00000555067 PNMA6AP0CW24 399 aaPredicted RBP4.08□□□□□ -1.76
VRK1-203ENST00000555067 SLC2A5P22732 501 aa4.08□□□□□ -1.76
VRK1-203ENST00000555067 IVDP26440 423 aa4.08□□□□□ -1.76
VRK1-203ENST00000555067 CSNK1A1P48729 337 aa4.08□□□□□ -1.76
VRK1-203ENST00000555067 GPM6AP51674 278 aa4.08□□□□□ -1.76
VRK1-203ENST00000555067 ARHGDIBP52566 201 aa4.08□□□□□ -1.76
VRK1-203ENST00000555067 ERVPABLB-1P60509 514 aa4.08□□□□□ -1.76
VRK1-203ENST00000555067 GGTLC2Q14390 218 aa4.08□□□□□ -1.76
VRK1-203ENST00000555067 SIX1Q15475 284 aaPredicted RBP4.08□□□□□ -1.76
VRK1-203ENST00000555067 C17orf58Q2M2W7 97 aa4.08□□□□□ -1.76
VRK1-203ENST00000555067 CNPY1Q3B7I2 92 aa4.08□□□□□ -1.76
VRK1-203ENST00000555067 NSUN5P1Q3KNT7 163 aa4.08□□□□□ -1.76
VRK1-203ENST00000555067 EOGTQ5NDL2 527 aa4.08□□□□□ -1.76
VRK1-203ENST00000555067 APOBEC3HQ6NTF7 200 aaKnown RBP4.08□□□□□ -1.76
VRK1-203ENST00000555067 DUX4L9Q6RFH8 374 aaPredicted RBP4.08□□□□□ -1.76
VRK1-203ENST00000555067 REG3GQ6UW15 175 aa4.08□□□□□ -1.76
VRK1-203ENST00000555067 TMPRSS11AQ6ZMR5 421 aa4.08□□□□□ -1.76
VRK1-203ENST00000555067 GDPGP1Q6ZNW5 385 aa4.08□□□□□ -1.76
VRK1-203ENST00000555067 ACOT7LQ6ZUV0 252 aa4.08□□□□□ -1.76
VRK1-203ENST00000555067 ZFAND4Q86XD8 727 aa4.08□□□□□ -1.76
VRK1-203ENST00000555067 ZNF547Q8IVP9 402 aa4.08□□□□□ -1.76
VRK1-203ENST00000555067 PRR22Q8IZ63 422 aa4.08□□□□□ -1.76
VRK1-203ENST00000555067 KIF2BQ8N4N8 673 aa4.08□□□□□ -1.76
VRK1-203ENST00000555067 NOXO1Q8NFA2 376 aa4.08□□□□□ -1.76
VRK1-203ENST00000555067 ACTR6Q9GZN1 396 aa4.08□□□□□ -1.76
VRK1-203ENST00000555067 CHRNA10Q9GZZ6 450 aa4.08□□□□□ -1.76
VRK1-203ENST00000555067 NXF3Q9H4D5 531 aaKnown RBP4.08□□□□□ -1.76
VRK1-203ENST00000555067 PATZ1Q9HBE1 687 aaKnown RBP4.08□□□□□ -1.76
VRK1-203ENST00000555067 EML4Q9HC35 981 aaKnown RBP4.08□□□□□ -1.76
VRK1-203ENST00000555067 GIN1Q9NXP7 522 aa4.08□□□□□ -1.76
VRK1-203ENST00000555067 SPRR3Q9UBC9 169 aa4.08□□□□□ -1.76
VRK1-203ENST00000555067 DUX4Q9UBX2 424 aa4.08□□□□□ -1.76
VRK1-203ENST00000555067 LGALS13Q9UHV8 139 aa4.08□□□□□ -1.76
VRK1-203ENST00000555067 NXT1Q9UKK6 140 aaKnown RBP4.08□□□□□ -1.76
VRK1-203ENST00000555067 MMP17Q9ULZ9 603 aa4.08□□□□□ -1.76
VRK1-203ENST00000555067 USP27XA6NNY8 438 aa4.07□□□□□ -1.76
VRK1-203ENST00000555067 MPTX1A8MV57 137 aa4.07□□□□□ -1.76
VRK1-203ENST00000555067 EPM2AB3EWF7 344 aa4.07□□□□□ -1.76
VRK1-203ENST00000555067 E7EWF7 191 aa4.07□□□□□ -1.76
VRK1-203ENST00000555067 G3V3Y1 287 aa4.07□□□□□ -1.76
VRK1-203ENST00000555067 SMLR1H3BR10 107 aa4.07□□□□□ -1.76
VRK1-203ENST00000555067 K7ENP7 123 aa4.07□□□□□ -1.76
VRK1-203ENST00000555067 DYNC1I1O14576 645 aa4.07□□□□□ -1.76
VRK1-203ENST00000555067 MRPS12O15235 138 aaKnown RBP4.07□□□□□ -1.76
VRK1-203ENST00000555067 B4GALT5O43286 388 aa4.07□□□□□ -1.76
VRK1-203ENST00000555067 SNAP91O60641 907 aa4.07□□□□□ -1.76
VRK1-203ENST00000555067 ZMPSTE24O75844 475 aa4.07□□□□□ -1.76
VRK1-203ENST00000555067 OXTP01178 125 aa4.07□□□□□ -1.76
VRK1-203ENST00000555067 BGNP21810 368 aa4.07□□□□□ -1.76
VRK1-203ENST00000555067 ADORA2BP29275 332 aa4.07□□□□□ -1.76
VRK1-203ENST00000555067 HMGCLP35914 325 aa4.07□□□□□ -1.76
VRK1-203ENST00000555067 RFC3P40938 356 aa4.07□□□□□ -1.76
VRK1-203ENST00000555067 RPL29P47914 159 aaKnown RBP4.07□□□□□ -1.76
VRK1-203ENST00000555067 SSR4P51571 173 aa4.07□□□□□ -1.76
VRK1-203ENST00000555067 RIDAP52758 137 aaKnown RBP4.07□□□□□ -1.76
VRK1-203ENST00000555067 UBE2G2P60604 165 aa4.07□□□□□ -1.76
VRK1-203ENST00000555067 ADARB1P78563 741 aaKnown RBP4.07□□□□□ -1.76
VRK1-203ENST00000555067 TLE4Q04727 773 aa4.07□□□□□ -1.76
VRK1-203ENST00000555067 ORC2Q13416 577 aaPredicted RBP4.07□□□□□ -1.76
VRK1-203ENST00000555067 PIGHQ14442 188 aaPredicted RBP4.07□□□□□ -1.76
VRK1-203ENST00000555067 PAN3Q58A45 887 aaKnown RBP4.07□□□□□ -1.76
VRK1-203ENST00000555067 TPRG1LQ5T0D9 272 aa4.07□□□□□ -1.76
VRK1-203ENST00000555067 PTRHD1Q6GMV3 140 aaKnown RBP4.07□□□□□ -1.76
VRK1-203ENST00000555067 ADNP2Q6IQ32 1131 aa4.07□□□□□ -1.76
VRK1-203ENST00000555067 ARMCX5Q6P1M9 558 aa4.07□□□□□ -1.76
VRK1-203ENST00000555067 LHFPL3Q86UP9 236 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms