RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 FIBINQ8TAL6 211 aa6.37□□□□□ -1.39
SYNE2-216ENST00000555002 NEIL2Q969S2 332 aa6.37□□□□□ -1.39
SYNE2-216ENST00000555002 MRPS24Q96EL2 167 aaKnown RBP6.37□□□□□ -1.39
SYNE2-216ENST00000555002 ALOX12BO75342 701 aa6.37□□□□□ -1.39
SYNE2-216ENST00000555002 PTTG1O95997 202 aa6.37□□□□□ -1.39
SYNE2-216ENST00000555002 RNASE1P07998 156 aaKnown RBP6.37□□□□□ -1.39
SYNE2-216ENST00000555002 PBX1P40424 430 aa6.37□□□□□ -1.39
SYNE2-216ENST00000555002 ERVPABLB-1P60509 514 aa6.37□□□□□ -1.39
SYNE2-216ENST00000555002 PITX1P78337 314 aaPredicted RBP6.37□□□□□ -1.39
SYNE2-216ENST00000555002 LYPD8Q6UX82 237 aa6.37□□□□□ -1.39
SYNE2-216ENST00000555002 SEC22AQ96IW7 307 aa6.37□□□□□ -1.39
SYNE2-216ENST00000555002 SCML1Q9UN30 329 aa6.37□□□□□ -1.39
SYNE2-216ENST00000555002 TMED7-TICAM2A0A0A6YYA0 188 aa6.36□□□□□ -1.39
SYNE2-216ENST00000555002 OR6C68A6NDL8 312 aa6.36□□□□□ -1.39
SYNE2-216ENST00000555002 CYR61O00622 381 aa6.36□□□□□ -1.39
SYNE2-216ENST00000555002 RTP2Q5QGT7 225 aa6.36□□□□□ -1.39
SYNE2-216ENST00000555002 ALKAL2Q6UX46 152 aa6.36□□□□□ -1.39
SYNE2-216ENST00000555002 ARHGEF39Q8N4T4 335 aa6.36□□□□□ -1.39
SYNE2-216ENST00000555002 SLC35B2Q8TB61 432 aa6.36□□□□□ -1.39
SYNE2-216ENST00000555002 ZNF596Q8TC21 504 aa6.36□□□□□ -1.39
SYNE2-216ENST00000555002 BTNL2Q9UIR0 455 aa6.36□□□□□ -1.39
SYNE2-216ENST00000555002 TMED7Q9Y3B3 224 aa6.36□□□□□ -1.39
SYNE2-216ENST00000555002 YLPM1P49750 1951 aaKnown RBP6.36□□□□□ -1.39
SYNE2-216ENST00000555002 ZNF716A6NP11 495 aa6.36□□□□□ -1.39
SYNE2-216ENST00000555002 ADAM12O43184 909 aa6.36□□□□□ -1.39
SYNE2-216ENST00000555002 JAG1P78504 1218 aa6.36□□□□□ -1.39
SYNE2-216ENST00000555002 DUSP2Q05923 314 aa6.36□□□□□ -1.39
SYNE2-216ENST00000555002 BAMBIQ13145 260 aa6.36□□□□□ -1.39
SYNE2-216ENST00000555002 VAMP3Q15836 100 aa6.36□□□□□ -1.39
SYNE2-216ENST00000555002 ZNF385BQ569K4 471 aa6.36□□□□□ -1.39
SYNE2-216ENST00000555002 TIFABQ6ZNK6 161 aa6.36□□□□□ -1.39
SYNE2-216ENST00000555002 BTLAQ7Z6A9 289 aa6.36□□□□□ -1.39
SYNE2-216ENST00000555002 CMASQ8NFW8 434 aaPredicted RBP6.36□□□□□ -1.39
SYNE2-216ENST00000555002 ENTPD2Q9Y5L3 495 aa6.36□□□□□ -1.39
SYNE2-216ENST00000555002 MED1Q15648 1581 aaPredicted RBP6.36□□□□□ -1.39
SYNE2-216ENST00000555002 MYADML2A6NDP7 307 aa6.36□□□□□ -1.39
SYNE2-216ENST00000555002 ZNF701M0R085 212 aaPredicted RBP6.36□□□□□ -1.39
SYNE2-216ENST00000555002 PRAF2O60831 178 aa6.36□□□□□ -1.39
SYNE2-216ENST00000555002 H3F3AP84243 136 aa6.36□□□□□ -1.39
SYNE2-216ENST00000555002 PGGHGQ32M88 737 aa6.36□□□□□ -1.39
SYNE2-216ENST00000555002 DNAJC5GQ8N7S2 189 aa6.36□□□□□ -1.39
SYNE2-216ENST00000555002 OR2AK2Q8NG84 335 aa6.36□□□□□ -1.39
SYNE2-216ENST00000555002 FOXQ1Q9C009 403 aa6.36□□□□□ -1.39
SYNE2-216ENST00000555002 UBQLN4Q9NRR5 601 aa6.36□□□□□ -1.39
SYNE2-216ENST00000555002 IGHV3-20A0A0C4DH32 117 aa6.36□□□□□ -1.39
SYNE2-216ENST00000555002 SLC5A10A0PJK1 596 aa6.36□□□□□ -1.39
SYNE2-216ENST00000555002 SH2D1BO14796 132 aa6.36□□□□□ -1.39
SYNE2-216ENST00000555002 CACNG3O60359 315 aa6.36□□□□□ -1.39
SYNE2-216ENST00000555002 SNRPBP14678 240 aaKnown RBP6.36□□□□□ -1.39
SYNE2-216ENST00000555002 RPS25P62851 125 aaKnown RBP6.36□□□□□ -1.39
SYNE2-216ENST00000555002 LETMD1Q6P1Q0 360 aa6.36□□□□□ -1.39
SYNE2-216ENST00000555002 NOL4LQ96MY1 436 aaPredicted RBP6.36□□□□□ -1.39
SYNE2-216ENST00000555002 ALPK2Q86TB3 2170 aa6.36□□□□□ -1.39
SYNE2-216ENST00000555002 KLF11O14901 512 aa6.36□□□□□ -1.39
SYNE2-216ENST00000555002 ZNF264O43296 627 aa6.36□□□□□ -1.39
SYNE2-216ENST00000555002 GALR2O43603 387 aaPredicted RBP6.36□□□□□ -1.39
SYNE2-216ENST00000555002 SPNS3Q6ZMD2 512 aa6.36□□□□□ -1.39
SYNE2-216ENST00000555002 CMTM4Q8IZR5 234 aa6.36□□□□□ -1.39
SYNE2-216ENST00000555002 RTL8AQ9BWD3 113 aa6.36□□□□□ -1.39
SYNE2-216ENST00000555002 TMPRSS5Q9H3S3 457 aa6.36□□□□□ -1.39
SYNE2-216ENST00000555002 MKS1Q9NXB0 559 aa6.36□□□□□ -1.39
SYNE2-216ENST00000555002 ZNFX1Q9P2E3 1918 aaKnown RBP6.36□□□□□ -1.39
SYNE2-216ENST00000555002 HTR2CP28335 458 aa6.36□□□□□ -1.39
SYNE2-216ENST00000555002 ACSM1Q08AH1 577 aa6.36□□□□□ -1.39
SYNE2-216ENST00000555002 YRDCQ86U90 279 aaKnown RBP6.36□□□□□ -1.39
SYNE2-216ENST00000555002 FAXDC2Q96IV6 333 aa6.36□□□□□ -1.39
SYNE2-216ENST00000555002 C1orf74Q96LT6 269 aa6.36□□□□□ -1.39
SYNE2-216ENST00000555002 FZR1Q9UM11 496 aa6.36□□□□□ -1.39
SYNE2-216ENST00000555002 I6L893 689 aaPredicted RBP6.36□□□□□ -1.39
SYNE2-216ENST00000555002 SOX15O60248 233 aa6.36□□□□□ -1.39
SYNE2-216ENST00000555002 PIGAP37287 484 aa6.36□□□□□ -1.39
SYNE2-216ENST00000555002 TMEM182Q6ZP80 229 aaPredicted RBP6.36□□□□□ -1.39
SYNE2-216ENST00000555002 ACOT7LQ6ZUV0 252 aa6.36□□□□□ -1.39
SYNE2-216ENST00000555002 TMEM181Q9P2C4 612 aa6.36□□□□□ -1.39
SYNE2-216ENST00000555002 SLX4Q8IY92 1834 aa6.36□□□□□ -1.39
SYNE2-216ENST00000555002 MCM3APO60318 1980 aa6.36□□□□□ -1.39
SYNE2-216ENST00000555002 GPR19Q15760 415 aa6.36□□□□□ -1.39
SYNE2-216ENST00000555002 CPZQ66K79 652 aa6.36□□□□□ -1.39
SYNE2-216ENST00000555002 MISPQ8IVT2 679 aa6.36□□□□□ -1.39
SYNE2-216ENST00000555002 SLC7A5P1Q8MH63 180 aa6.36□□□□□ -1.39
SYNE2-216ENST00000555002 C1orf87Q8N0U7 546 aa6.36□□□□□ -1.39
SYNE2-216ENST00000555002 C19orf47Q8N9M1 422 aaKnown RBP6.36□□□□□ -1.39
SYNE2-216ENST00000555002 DTWD2Q8NBA8 298 aa6.36□□□□□ -1.39
SYNE2-216ENST00000555002 MFSD9Q8NBP5 474 aa6.36□□□□□ -1.39
SYNE2-216ENST00000555002 OR10K1Q8NGX5 313 aa6.36□□□□□ -1.39
SYNE2-216ENST00000555002 MISP3Q96FF7 219 aa6.36□□□□□ -1.39
SYNE2-216ENST00000555002 SLC30A3Q99726 388 aa6.36□□□□□ -1.39
SYNE2-216ENST00000555002 PAAF1Q9BRP4 392 aa6.36□□□□□ -1.39
SYNE2-216ENST00000555002 BARHL1Q9BZE3 327 aa6.36□□□□□ -1.39
SYNE2-216ENST00000555002 BANF2Q9H503 90 aa6.36□□□□□ -1.39
SYNE2-216ENST00000555002 EMC7Q9NPA0 242 aa6.36□□□□□ -1.39
SYNE2-216ENST00000555002 FBXO8Q9NRD0 319 aa6.36□□□□□ -1.39
SYNE2-216ENST00000555002 IGSF5Q9NSI5 407 aa6.36□□□□□ -1.39
SYNE2-216ENST00000555002 SAGE1Q9NXZ1 904 aa6.36□□□□□ -1.39
SYNE2-216ENST00000555002 SIX4Q9UIU6 781 aa6.36□□□□□ -1.39
SYNE2-216ENST00000555002 NACAE9PAV3 2078 aa6.36□□□□□ -1.39
SYNE2-216ENST00000555002 AQP9O43315 295 aa6.36□□□□□ -1.39
SYNE2-216ENST00000555002 CIDEAO60543 219 aa6.36□□□□□ -1.39
SYNE2-216ENST00000555002 OR2C1O95371 312 aa6.36□□□□□ -1.39
SYNE2-216ENST00000555002 SNAI1O95863 264 aaPredicted RBP6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms