RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 ZNF266Q14584 549 aa12.83□□□□□ -0.36
VTI1B-204ENST00000554659 SECTM1Q8WVN6 248 aa12.83□□□□□ -0.36
VTI1B-204ENST00000554659 YIPF5Q969M3 257 aa12.83□□□□□ -0.36
VTI1B-204ENST00000554659 ZBP1Q9H171 429 aa12.83□□□□□ -0.36
VTI1B-204ENST00000554659 PIGMQ9H3S5 423 aa12.83□□□□□ -0.36
VTI1B-204ENST00000554659 SCPEP1Q9HB40 452 aa12.83□□□□□ -0.36
VTI1B-204ENST00000554659 URGCP-MRPS24S4R325 110 aa12.83□□□□□ -0.36
VTI1B-204ENST00000554659 CHRM2P08172 466 aa12.83□□□□□ -0.36
VTI1B-204ENST00000554659 HBG1P69891 147 aa12.83□□□□□ -0.36
VTI1B-204ENST00000554659 HBG2P69892 147 aa12.83□□□□□ -0.36
VTI1B-204ENST00000554659 SMIM15Q7Z3B0 74 aa12.83□□□□□ -0.36
VTI1B-204ENST00000554659 MS4A6EQ96DS6 147 aa12.83□□□□□ -0.36
VTI1B-204ENST00000554659 NKX3-1Q99801 234 aaPredicted RBP12.83□□□□□ -0.36
VTI1B-204ENST00000554659 CTRCQ99895 268 aa12.83□□□□□ -0.36
VTI1B-204ENST00000554659 POFUT1Q9H488 388 aa12.83□□□□□ -0.36
VTI1B-204ENST00000554659 CMC2Q9NRP2 79 aa12.83□□□□□ -0.36
VTI1B-204ENST00000554659 ASB1Q9Y576 335 aa12.83□□□□□ -0.36
VTI1B-204ENST00000554659 TMEM202A6NGA9 273 aa12.83□□□□□ -0.36
VTI1B-204ENST00000554659 MRPL33O75394 65 aaKnown RBP12.83□□□□□ -0.36
VTI1B-204ENST00000554659 CAMK2BQ13554 666 aa12.83□□□□□ -0.36
VTI1B-204ENST00000554659 KIAA0141Q14154 515 aaPredicted RBP12.83□□□□□ -0.36
VTI1B-204ENST00000554659 SLC10A1Q14973 349 aa12.83□□□□□ -0.36
VTI1B-204ENST00000554659 ADIRFQ15847 76 aa12.83□□□□□ -0.36
VTI1B-204ENST00000554659 LTC4SQ16873 150 aa12.83□□□□□ -0.36
VTI1B-204ENST00000554659 IAH1Q2TAA2 248 aaPredicted RBP12.83□□□□□ -0.36
VTI1B-204ENST00000554659 SOWAHCQ53LP3 525 aaPredicted RBP12.83□□□□□ -0.36
VTI1B-204ENST00000554659 TMEM217Q8N7C4 229 aa12.83□□□□□ -0.36
VTI1B-204ENST00000554659 DMBX1Q8NFW5 382 aa12.83□□□□□ -0.36
VTI1B-204ENST00000554659 ANKRD9Q96BM1 317 aaPredicted RBP12.83□□□□□ -0.36
VTI1B-204ENST00000554659 BTF3L4Q96K17 158 aa12.83□□□□□ -0.36
VTI1B-204ENST00000554659 SGPP1Q9BX95 441 aa12.83□□□□□ -0.36
VTI1B-204ENST00000554659 SLC25A19Q9HC21 320 aa12.83□□□□□ -0.36
VTI1B-204ENST00000554659 EXOSC3Q9NQT5 275 aaKnown RBP12.83□□□□□ -0.36
VTI1B-204ENST00000554659 SH3BGRL2Q9UJC5 107 aa12.83□□□□□ -0.36
VTI1B-204ENST00000554659 GAB2Q9UQC2 676 aa12.83□□□□□ -0.36
VTI1B-204ENST00000554659 TMEM221A6NGB7 291 aa12.83□□□□□ -0.36
VTI1B-204ENST00000554659 TARM1B6A8C7 271 aa12.83□□□□□ -0.36
VTI1B-204ENST00000554659 GABREP78334 506 aa12.83□□□□□ -0.36
VTI1B-204ENST00000554659 BAXQ07812 192 aa12.83□□□□□ -0.36
VTI1B-204ENST00000554659 PMPCAQ10713 525 aa12.83□□□□□ -0.36
VTI1B-204ENST00000554659 DUSP5Q16690 384 aa12.83□□□□□ -0.36
VTI1B-204ENST00000554659 RNLSQ5VYX0 342 aa12.83□□□□□ -0.36
VTI1B-204ENST00000554659 ACSM5Q6NUN0 579 aa12.83□□□□□ -0.36
VTI1B-204ENST00000554659 PRSS45Q7RTY3 260 aa12.83□□□□□ -0.36
VTI1B-204ENST00000554659 FAM58AQ8N1B3 248 aa12.83□□□□□ -0.36
VTI1B-204ENST00000554659 FGGYQ96C11 551 aa12.83□□□□□ -0.36
VTI1B-204ENST00000554659 DDOQ99489 341 aa12.83□□□□□ -0.36
VTI1B-204ENST00000554659 PDCD1LG2Q9BQ51 273 aa12.83□□□□□ -0.36
VTI1B-204ENST00000554659 BOKQ9UMX3 212 aaPredicted RBP12.83□□□□□ -0.36
VTI1B-204ENST00000554659 C19orf53Q9UNZ5 99 aaPredicted RBP12.83□□□□□ -0.36
VTI1B-204ENST00000554659 HMGA1P17096 107 aaKnown RBP12.82□□□□□ -0.36
VTI1B-204ENST00000554659 TMEM99Q8N816 258 aa12.82□□□□□ -0.36
VTI1B-204ENST00000554659 PLPP7Q8NBV4 271 aa12.82□□□□□ -0.36
VTI1B-204ENST00000554659 OR51S1Q8NGJ8 323 aa12.82□□□□□ -0.36
VTI1B-204ENST00000554659 C14orf79Q96F83 325 aa12.82□□□□□ -0.36
VTI1B-204ENST00000554659 PLSCR5A0PG75 271 aa12.82□□□□□ -0.36
VTI1B-204ENST00000554659 FOLR1P15328 257 aa12.82□□□□□ -0.36
VTI1B-204ENST00000554659 ANXA7P20073 488 aaKnown RBP12.82□□□□□ -0.36
VTI1B-204ENST00000554659 ZNF133P52736 654 aaPredicted RBP12.82□□□□□ -0.36
VTI1B-204ENST00000554659 FCRL6Q6DN72 434 aa12.82□□□□□ -0.36
VTI1B-204ENST00000554659 LINC00346Q8IVM7 164 aa12.82□□□□□ -0.36
VTI1B-204ENST00000554659 OR5D18Q8NGL1 313 aa12.82□□□□□ -0.36
VTI1B-204ENST00000554659 OBP2BQ9NPH6 170 aa12.82□□□□□ -0.36
VTI1B-204ENST00000554659 ATP13A2Q9NQ11 1180 aa12.82□□□□□ -0.36
VTI1B-204ENST00000554659 TMEM184BQ9Y519 407 aaPredicted RBP12.82□□□□□ -0.36
VTI1B-204ENST00000554659 ZIC2O95409 532 aaPredicted RBP12.82□□□□□ -0.36
VTI1B-204ENST00000554659 CLDN1O95832 211 aa12.82□□□□□ -0.36
VTI1B-204ENST00000554659 IGLV3-27P01718 113 aa12.82□□□□□ -0.36
VTI1B-204ENST00000554659 PMP2P02689 132 aa12.82□□□□□ -0.36
VTI1B-204ENST00000554659 ZNF385BQ569K4 471 aa12.82□□□□□ -0.36
VTI1B-204ENST00000554659 SYT9Q86SS6 491 aa12.82□□□□□ -0.36
VTI1B-204ENST00000554659 ZNF845Q96IR2 970 aaPredicted RBP12.82□□□□□ -0.36
VTI1B-204ENST00000554659 Q96M85 177 aa12.82□□□□□ -0.36
VTI1B-204ENST00000554659 OPALINQ96PE5 141 aa12.82□□□□□ -0.36
VTI1B-204ENST00000554659 ZDHHC5Q9C0B5 715 aa12.82□□□□□ -0.36
VTI1B-204ENST00000554659 IKZF5Q9H5V7 419 aa12.82□□□□□ -0.36
VTI1B-204ENST00000554659 HINT3Q9NQE9 182 aaKnown RBP12.82□□□□□ -0.36
VTI1B-204ENST00000554659 ACHEP22303 614 aa12.82□□□□□ -0.36
VTI1B-204ENST00000554659 AKR1C1Q04828 323 aa12.82□□□□□ -0.36
VTI1B-204ENST00000554659 PXDC1Q5TGL8 231 aa12.82□□□□□ -0.36
VTI1B-204ENST00000554659 ADIPOR2Q86V24 386 aa12.82□□□□□ -0.36
VTI1B-204ENST00000554659 OR2L13Q8N349 312 aa12.82□□□□□ -0.36
VTI1B-204ENST00000554659 ARV1Q9H2C2 271 aa12.82□□□□□ -0.36
VTI1B-204ENST00000554659 FN3KRPQ9HA64 309 aa12.82□□□□□ -0.36
VTI1B-204ENST00000554659 ACOXLQ9NUZ1 547 aa12.82□□□□□ -0.36
VTI1B-204ENST00000554659 EXO1Q9UQ84 846 aaKnown RBP12.82□□□□□ -0.36
VTI1B-204ENST00000554659 OSGIN2Q9Y236 505 aa12.82□□□□□ -0.36
VTI1B-204ENST00000554659 TNFSF4P23510 183 aa12.81□□□□□ -0.36
VTI1B-204ENST00000554659 RFX2P48378 723 aa12.81□□□□□ -0.36
VTI1B-204ENST00000554659 EPHA5P54756 1037 aa12.81□□□□□ -0.36
VTI1B-204ENST00000554659 LYSMD4Q5XG99 296 aa12.81□□□□□ -0.36
VTI1B-204ENST00000554659 H3F3CQ6NXT2 135 aa12.81□□□□□ -0.36
VTI1B-204ENST00000554659 AAED1Q7RTV5 226 aa12.81□□□□□ -0.36
VTI1B-204ENST00000554659 C20orf24Q9BUV8 137 aa12.81□□□□□ -0.36
VTI1B-204ENST00000554659 OCEL1Q9H607 264 aa12.81□□□□□ -0.36
VTI1B-204ENST00000554659 TM7SF3Q9NS93 570 aa12.81□□□□□ -0.36
VTI1B-204ENST00000554659 NUDT19A8MXV4 375 aa12.81□□□□□ -0.36
VTI1B-204ENST00000554659 EIF4E2O60573 245 aaKnown RBP12.81□□□□□ -0.36
VTI1B-204ENST00000554659 EIF1P41567 113 aaKnown RBP12.81□□□□□ -0.36
VTI1B-204ENST00000554659 P2RX1P51575 399 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms