RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 C3orf49Q96BT1 292 aa3.64□□□□□ -1.83
VTI1B-203ENST00000554636 S100PBPQ96BU1 408 aa3.64□□□□□ -1.83
VTI1B-203ENST00000554636 SPDL1Q96EA4 605 aa3.64□□□□□ -1.83
VTI1B-203ENST00000554636 DNAJA3Q96EY1 480 aa3.64□□□□□ -1.83
VTI1B-203ENST00000554636 REXO5Q96IC2 774 aaKnown RBP3.64□□□□□ -1.83
VTI1B-203ENST00000554636 MAGEB18Q96M61 343 aa3.64□□□□□ -1.83
VTI1B-203ENST00000554636 PIP5K1AQ99755 562 aa3.64□□□□□ -1.83
VTI1B-203ENST00000554636 MTHFD2LQ9H903 347 aaPredicted RBP3.64□□□□□ -1.83
VTI1B-203ENST00000554636 UBTD1Q9HAC8 227 aa3.64□□□□□ -1.83
VTI1B-203ENST00000554636 BCL2L10Q9HD36 194 aa3.64□□□□□ -1.83
VTI1B-203ENST00000554636 A4GALTQ9NPC4 353 aa3.64□□□□□ -1.83
VTI1B-203ENST00000554636 PAPOLBQ9NRJ5 636 aaKnown RBP3.64□□□□□ -1.83
VTI1B-203ENST00000554636 SERINC1Q9NRX5 453 aa3.64□□□□□ -1.83
VTI1B-203ENST00000554636 INTS9Q9NV88 658 aaKnown RBP3.64□□□□□ -1.83
VTI1B-203ENST00000554636 BEX4Q9NWD9 120 aaPredicted RBP3.64□□□□□ -1.83
VTI1B-203ENST00000554636 CALML5Q9NZT1 146 aa3.64□□□□□ -1.83
VTI1B-203ENST00000554636 VAPAQ9P0L0 249 aa3.64□□□□□ -1.83
VTI1B-203ENST00000554636 KLHL9Q9P2J3 617 aa3.64□□□□□ -1.83
VTI1B-203ENST00000554636 TMED7Q9Y3B3 224 aa3.64□□□□□ -1.83
VTI1B-203ENST00000554636 GMEB1Q9Y692 573 aa3.64□□□□□ -1.83
VTI1B-203ENST00000554636 CSPG4Q6UVK1 2322 aa3.64□□□□□ -1.83
VTI1B-203ENST00000554636 A0A0G2JPF8 293 aa3.63□□□□□ -1.83
VTI1B-203ENST00000554636 A0A1W2PP18 115 aa3.63□□□□□ -1.83
VTI1B-203ENST00000554636 LIPT2A6NK58 231 aa3.63□□□□□ -1.83
VTI1B-203ENST00000554636 HNRNPCL2B2RXH8 293 aa3.63□□□□□ -1.83
VTI1B-203ENST00000554636 HNRNPCL3B7ZW38 293 aa3.63□□□□□ -1.83
VTI1B-203ENST00000554636 PDLIM1O00151 329 aa3.63□□□□□ -1.83
VTI1B-203ENST00000554636 SULT2B1O00204 365 aa3.63□□□□□ -1.83
VTI1B-203ENST00000554636 HNRNPCL1O60812 293 aaKnown RBP3.63□□□□□ -1.83
VTI1B-203ENST00000554636 EDF1O60869 148 aaKnown RBP3.63□□□□□ -1.83
VTI1B-203ENST00000554636 NPIPB7O75200 414 aa3.63□□□□□ -1.83
VTI1B-203ENST00000554636 LYZL6O75951 148 aa3.63□□□□□ -1.83
VTI1B-203ENST00000554636 PGM3O95394 542 aa3.63□□□□□ -1.83
VTI1B-203ENST00000554636 TOMM40O96008 361 aa3.63□□□□□ -1.83
VTI1B-203ENST00000554636 ADAP00813 363 aa3.63□□□□□ -1.83
VTI1B-203ENST00000554636 ITGA5P08648 1049 aa3.63□□□□□ -1.83
VTI1B-203ENST00000554636 HNRNPCL4P0DMR1 293 aa3.63□□□□□ -1.83
VTI1B-203ENST00000554636 TFPIP10646 304 aa3.63□□□□□ -1.83
VTI1B-203ENST00000554636 PRG2P13727 222 aa3.63□□□□□ -1.83
VTI1B-203ENST00000554636 CD99P14209 185 aa3.63□□□□□ -1.83
VTI1B-203ENST00000554636 PAX1P15863 534 aa3.63□□□□□ -1.83
VTI1B-203ENST00000554636 IL7RP16871 459 aa3.63□□□□□ -1.83
VTI1B-203ENST00000554636 HOXB6P17509 224 aaKnown RBP3.63□□□□□ -1.83
VTI1B-203ENST00000554636 CCNA2P20248 432 aa3.63□□□□□ -1.83
VTI1B-203ENST00000554636 HTR2AP28223 471 aa3.63□□□□□ -1.83
VTI1B-203ENST00000554636 SLC1A3P43003 542 aa3.63□□□□□ -1.83
VTI1B-203ENST00000554636 SOX2P48431 317 aa3.63□□□□□ -1.83
VTI1B-203ENST00000554636 CLK1P49759 484 aaKnown RBP3.63□□□□□ -1.83
VTI1B-203ENST00000554636 P2RY4P51582 365 aa3.63□□□□□ -1.83
VTI1B-203ENST00000554636 NR1H2P55055 460 aa3.63□□□□□ -1.83
VTI1B-203ENST00000554636 OR2B6P58173 313 aa3.63□□□□□ -1.83
VTI1B-203ENST00000554636 IRX1P78414 480 aaPredicted RBP3.63□□□□□ -1.83
VTI1B-203ENST00000554636 H3F3AP84243 136 aa3.63□□□□□ -1.83
VTI1B-203ENST00000554636 FADDQ13158 208 aa3.63□□□□□ -1.83
VTI1B-203ENST00000554636 ITGADQ13349 1161 aa3.63□□□□□ -1.83
VTI1B-203ENST00000554636 KEAP1Q14145 624 aa3.63□□□□□ -1.83
VTI1B-203ENST00000554636 SELPLGQ14242 412 aa3.63□□□□□ -1.83
VTI1B-203ENST00000554636 GNA13Q14344 377 aa3.63□□□□□ -1.83
VTI1B-203ENST00000554636 P2RY6Q15077 328 aa3.63□□□□□ -1.83
VTI1B-203ENST00000554636 ZSWIM7Q19AV6 140 aa3.63□□□□□ -1.83
VTI1B-203ENST00000554636 ODF3L2Q3SX64 289 aa3.63□□□□□ -1.83
VTI1B-203ENST00000554636 MIDNQ504T8 468 aa3.63□□□□□ -1.83
VTI1B-203ENST00000554636 AGKQ53H12 422 aa3.63□□□□□ -1.83
VTI1B-203ENST00000554636 NCMAPQ5T1S8 102 aa3.63□□□□□ -1.83
VTI1B-203ENST00000554636 WBP2NLQ6ICG8 309 aa3.63□□□□□ -1.83
VTI1B-203ENST00000554636 DHRS4L2Q6PKH6 230 aa3.63□□□□□ -1.83
VTI1B-203ENST00000554636 PAQR6Q6TCH4 344 aa3.63□□□□□ -1.83
VTI1B-203ENST00000554636 DLEU7Q6UYE1 221 aa3.63□□□□□ -1.83
VTI1B-203ENST00000554636 Q6ZT83 130 aa3.63□□□□□ -1.83
VTI1B-203ENST00000554636 BHLHA15Q7RTS1 189 aaPredicted RBP3.63□□□□□ -1.83
VTI1B-203ENST00000554636 GALNT5Q7Z7M9 940 aa3.63□□□□□ -1.83
VTI1B-203ENST00000554636 ZNF440Q8IYI8 595 aa3.63□□□□□ -1.83
VTI1B-203ENST00000554636 LRRC75A-AS1Q8N1F1 130 aa3.63□□□□□ -1.83
VTI1B-203ENST00000554636 DPP10Q8N608 796 aa3.63□□□□□ -1.83
VTI1B-203ENST00000554636 ZNF433Q8N7K0 673 aaPredicted RBP3.63□□□□□ -1.83
VTI1B-203ENST00000554636 OR52E4Q8NGH9 312 aa3.63□□□□□ -1.83
VTI1B-203ENST00000554636 LILRB1Q8NHL6 650 aaPredicted RBP3.63□□□□□ -1.83
VTI1B-203ENST00000554636 NFKBIDQ8NI38 313 aa3.63□□□□□ -1.83
VTI1B-203ENST00000554636 DYDC1Q8WWB3 177 aa3.63□□□□□ -1.83
VTI1B-203ENST00000554636 NEUROG1Q92886 237 aa3.63□□□□□ -1.83
VTI1B-203ENST00000554636 SLC35B4Q969S0 331 aa3.63□□□□□ -1.83
VTI1B-203ENST00000554636 ZNF566Q969W8 418 aa3.63□□□□□ -1.83
VTI1B-203ENST00000554636 TMEM45BQ96B21 275 aa3.63□□□□□ -1.83
VTI1B-203ENST00000554636 DDIT4LQ96D03 193 aa3.63□□□□□ -1.83
VTI1B-203ENST00000554636 ZHX1-C8orf76Q96EF9 292 aa3.63□□□□□ -1.83
VTI1B-203ENST00000554636 THOC1Q96FV9 657 aaKnown RBP3.63□□□□□ -1.83
VTI1B-203ENST00000554636 CCL19Q99731 98 aa3.63□□□□□ -1.83
VTI1B-203ENST00000554636 HDHD5Q9BXW7 423 aa3.63□□□□□ -1.83
VTI1B-203ENST00000554636 RAD21L1Q9H4I0 556 aa3.63□□□□□ -1.83
VTI1B-203ENST00000554636 FANCFQ9NPI8 374 aa3.63□□□□□ -1.83
VTI1B-203ENST00000554636 ARGLU1Q9NWB6 273 aaPredicted RBP3.63□□□□□ -1.83
VTI1B-203ENST00000554636 ZNF446Q9NWS9 450 aa3.63□□□□□ -1.83
VTI1B-203ENST00000554636 THUMPD1Q9NXG2 353 aaKnown RBP3.63□□□□□ -1.83
VTI1B-203ENST00000554636 NPAP1Q9NZP6 1156 aa3.63□□□□□ -1.83
VTI1B-203ENST00000554636 CCDC167Q9P0B6 97 aa3.63□□□□□ -1.83
VTI1B-203ENST00000554636 EMC3Q9P0I2 261 aa3.63□□□□□ -1.83
VTI1B-203ENST00000554636 TMEM181Q9P2C4 612 aa3.63□□□□□ -1.83
VTI1B-203ENST00000554636 MALT1Q9UDY8 824 aa3.63□□□□□ -1.83
VTI1B-203ENST00000554636 TRAPPC4Q9Y296 219 aa3.63□□□□□ -1.83
VTI1B-203ENST00000554636 NOSIPQ9Y314 301 aaKnown RBP3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms