RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 RAMP3O60896 148 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 AQP8O94778 261 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 CLDN7O95471 211 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 SERPINA5P05154 406 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 CRYGBP07316 175 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 CD48P09326 243 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 OCM2P0CE71 109 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 SLC35E2P0CK97 266 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 SMIM6P0DI80 62 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 MYL2P10916 166 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 ACADSP16219 412 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 ZNF25P17030 456 aaPredicted RBP2.43□□□□□ -2.02
PRPF39-206ENST00000554429 RPL5P46777 297 aaKnown RBP2.43□□□□□ -2.02
PRPF39-206ENST00000554429 ASCL1P50553 236 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 ATP1B3P54709 279 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 ELLP55199 621 aaPredicted RBP2.43□□□□□ -2.02
PRPF39-206ENST00000554429 SLC37A1P57057 533 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 HMGCS1Q01581 520 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 KRR1Q13601 381 aaKnown RBP2.43□□□□□ -2.02
PRPF39-206ENST00000554429 GRK1Q15835 563 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 RFX4Q33E94 735 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 GXYLT1Q4G148 440 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 TMEM107Q6UX40 140 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 C17orf107Q6ZR85 190 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 ABHD13Q7L211 337 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 LYG2Q86SG7 212 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 PLXDC1Q8IUK5 500 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 CROCCP3Q8IVE0 287 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 CDRT4Q8N9R6 151 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 CCDC71LQ8N9Z2 235 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 CCDC54Q8NEL0 328 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 OR5H6Q8NGV6 325 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 ZNF417Q8TAU3 575 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 PROKR1Q8TCW9 393 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 ZNF398Q8TD17 642 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 RNASEH2CQ8TDP1 164 aaKnown RBP2.43□□□□□ -2.02
PRPF39-206ENST00000554429 PHF10Q8WUB8 498 aaKnown RBP2.43□□□□□ -2.02
PRPF39-206ENST00000554429 PCNPQ8WW12 178 aaKnown RBP2.43□□□□□ -2.02
PRPF39-206ENST00000554429 PNPLA2Q96AD5 504 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 C14orf144Q96I85 54 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 MUS81Q96NY9 551 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 PRAP1Q96NZ9 151 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 ZNF587Q96SQ5 575 aaPredicted RBP2.43□□□□□ -2.02
PRPF39-206ENST00000554429 GPA33Q99795 319 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 AGPAT1Q99943 283 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 EBF4Q9BQW3 602 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 VPS25Q9BRG1 176 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 TRAF4Q9BUZ4 470 aaPredicted RBP2.43□□□□□ -2.02
PRPF39-206ENST00000554429 YTHDF1Q9BYJ9 559 aaKnown RBP2.43□□□□□ -2.02
PRPF39-206ENST00000554429 NAA50Q9GZZ1 169 aaKnown RBP2.43□□□□□ -2.02
PRPF39-206ENST00000554429 KLHL31Q9H511 634 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 ARMC7Q9H6L4 198 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 OCIAD1Q9NX40 245 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 ANKRD10Q9NXR5 420 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 MAT2BQ9NZL9 334 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 ABI3Q9P2A4 366 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 PLEKHB1Q9UF11 243 aaPredicted RBP2.43□□□□□ -2.02
PRPF39-206ENST00000554429 B9D1Q9UPM9 204 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 SLC22A13Q9Y226 551 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 TP53TG5Q9Y2B4 290 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 OR10H1Q9Y4A9 318 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 TCAF1Q9Y4C2 921 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 KALRNO60229 2985 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 ASPMQ8IZT6 3477 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 MAST4O15021 2626 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 LOC100509620A0A075B734 347 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 DISC1C4P0D8 188 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 FAM229AH3BQW9 127 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 K7EN84 100 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 TFECO14948 347 aaPredicted RBP2.43□□□□□ -2.02
PRPF39-206ENST00000554429 NDUFS4O43181 175 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 DLEU1O43261 78 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 PCDH7O60245 1069 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 NUAK1O60285 661 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 DCTN3O75935 186 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 STK17BO94768 372 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 PRAMEF1O95521 474 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 PPBPP02775 128 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 NR4A1P22736 598 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 LHCGRP22888 699 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 EPHA3P29320 983 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 NTF4P34130 210 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 LIPAP38571 399 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 DCTP40126 519 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 CEACAM6P40199 344 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 IDH3GP51553 393 aaPredicted RBP2.43□□□□□ -2.02
PRPF39-206ENST00000554429 NUDT6P53370 316 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 MAZP56270 477 aaKnown RBP2.43□□□□□ -2.02
PRPF39-206ENST00000554429 FAM3AP98173 230 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 IL5RAQ01344 420 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 EGR4Q05215 589 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 BCL2L1Q07817 233 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 ACSM2AQ08AH3 577 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 RBBP4Q09028 425 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 TPBGQ13641 420 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 GABRA6Q16445 453 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 HENMT1Q5T8I9 393 aaKnown RBP2.43□□□□□ -2.02
PRPF39-206ENST00000554429 MROH9Q5TGP6 573 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 ACSM2BQ68CK6 577 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 LPCAT3Q6P1A2 487 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms