RNA–Protein interactions for RNA: ENST00000554214.5

ATXN3-225, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-225ENST00000554214 BPIFCQ8NFQ6 507 aa3.9□□□□□ -1.79
ATXN3-225ENST00000554214 OR4C15Q8NGM1 316 aa3.9□□□□□ -1.79
ATXN3-225ENST00000554214 OR52J3Q8NH60 311 aa3.9□□□□□ -1.79
ATXN3-225ENST00000554214 GATAD1Q8WUU5 269 aa3.9□□□□□ -1.79
ATXN3-225ENST00000554214 RLN3Q8WXF3 142 aa3.9□□□□□ -1.79
ATXN3-225ENST00000554214 CRYGNQ8WXF5 182 aa3.9□□□□□ -1.79
ATXN3-225ENST00000554214 SMARCD2Q92925 531 aa3.9□□□□□ -1.79
ATXN3-225ENST00000554214 TMEM203Q969S6 136 aa3.9□□□□□ -1.79
ATXN3-225ENST00000554214 FAM162AQ96A26 154 aa3.9□□□□□ -1.79
ATXN3-225ENST00000554214 MAGOHBQ96A72 148 aaKnown RBP3.9□□□□□ -1.79
ATXN3-225ENST00000554214 ISOC1Q96CN7 298 aa3.9□□□□□ -1.79
ATXN3-225ENST00000554214 ZHX1-C8orf76Q96EF9 292 aa3.9□□□□□ -1.79
ATXN3-225ENST00000554214 RNF145Q96MT1 663 aa3.9□□□□□ -1.79
ATXN3-225ENST00000554214 FOXN4Q96NZ1 517 aa3.9□□□□□ -1.79
ATXN3-225ENST00000554214 AGAP4Q96P64 663 aa3.9□□□□□ -1.79
ATXN3-225ENST00000554214 TOLLIPQ9H0E2 274 aa3.9□□□□□ -1.79
ATXN3-225ENST00000554214 COQ10BQ9H8M1 238 aa3.9□□□□□ -1.79
ATXN3-225ENST00000554214 POLD4Q9HCU8 107 aa3.9□□□□□ -1.79
ATXN3-225ENST00000554214 CHST11Q9NPF2 352 aa3.9□□□□□ -1.79
ATXN3-225ENST00000554214 OLAHQ9NV23 265 aa3.9□□□□□ -1.79
ATXN3-225ENST00000554214 SOHLH2Q9NX45 425 aa3.9□□□□□ -1.79
ATXN3-225ENST00000554214 SMPD3Q9NY59 655 aaPredicted RBP3.9□□□□□ -1.79
ATXN3-225ENST00000554214 COPZ2Q9P299 210 aa3.9□□□□□ -1.79
ATXN3-225ENST00000554214 ERVK-18Q9QC07 812 aa3.9□□□□□ -1.79
ATXN3-225ENST00000554214 RNF24Q9Y225 148 aa3.9□□□□□ -1.79
ATXN3-225ENST00000554214 STARD10Q9Y365 291 aa3.9□□□□□ -1.79
ATXN3-225ENST00000554214 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.9□□□□□ -1.79
ATXN3-225ENST00000554214 GOLT1BQ9Y3E0 138 aa3.9□□□□□ -1.79
ATXN3-225ENST00000554214 HSPE1-MOB4S4R3N1 261 aa3.9□□□□□ -1.79
ATXN3-225ENST00000554214 ARID2Q68CP9 1835 aa3.9□□□□□ -1.79
ATXN3-225ENST00000554214 ZNF462Q96JM2 2506 aa3.9□□□□□ -1.79
ATXN3-225ENST00000554214 F5P12259 2224 aa3.9□□□□□ -1.79
ATXN3-225ENST00000554214 KIAA1549LQ6ZVL6 1849 aa3.89□□□□□ -1.79
ATXN3-225ENST00000554214 TNRC6BQ9UPQ9 1833 aaKnown RBP3.89□□□□□ -1.79
ATXN3-225ENST00000554214 ASCC3Q8N3C0 2202 aaKnown RBP3.89□□□□□ -1.79
ATXN3-225ENST00000554214 MGAQ8IWI9 3026 aa3.89□□□□□ -1.79
ATXN3-225ENST00000554214 hCG_1809904A0A1W2PP81 198 aa3.89□□□□□ -1.79
ATXN3-225ENST00000554214 A0A1W2PPE2 198 aa3.89□□□□□ -1.79
ATXN3-225ENST00000554214 A0A1W2PR64 198 aa3.89□□□□□ -1.79
ATXN3-225ENST00000554214 MYBPHLA2RUH7 354 aa3.89□□□□□ -1.79
ATXN3-225ENST00000554214 BTBD17A6NE02 478 aa3.89□□□□□ -1.79
ATXN3-225ENST00000554214 SNURFLB1AK76 121 aa3.89□□□□□ -1.79
ATXN3-225ENST00000554214 NEDD8-MDP1E9PL57 170 aa3.89□□□□□ -1.79
ATXN3-225ENST00000554214 PRRG1O14668 218 aa3.89□□□□□ -1.79
ATXN3-225ENST00000554214 ARPC2O15144 300 aa3.89□□□□□ -1.79
ATXN3-225ENST00000554214 GYG2O15488 501 aa3.89□□□□□ -1.79
ATXN3-225ENST00000554214 FADS1O60427 444 aa3.89□□□□□ -1.79
ATXN3-225ENST00000554214 RAD1O60671 282 aa3.89□□□□□ -1.79
ATXN3-225ENST00000554214 CTNSO60931 367 aa3.89□□□□□ -1.79
ATXN3-225ENST00000554214 SDC3O75056 442 aa3.89□□□□□ -1.79
ATXN3-225ENST00000554214 TDP2O95551 362 aa3.89□□□□□ -1.79
ATXN3-225ENST00000554214 TSPAN12O95859 305 aa3.89□□□□□ -1.79
ATXN3-225ENST00000554214 IGHEP01854 428 aa3.89□□□□□ -1.79
ATXN3-225ENST00000554214 ALPPP05187 535 aa3.89□□□□□ -1.79
ATXN3-225ENST00000554214 KLK3P07288 261 aaPredicted RBP3.89□□□□□ -1.79
ATXN3-225ENST00000554214 OR4Q2P0C623 313 aa3.89□□□□□ -1.79
ATXN3-225ENST00000554214 ALPPL2P10696 532 aa3.89□□□□□ -1.79
ATXN3-225ENST00000554214 NR2C1P13056 603 aa3.89□□□□□ -1.79
ATXN3-225ENST00000554214 IRF2P14316 349 aa3.89□□□□□ -1.79
ATXN3-225ENST00000554214 CSRP1P21291 193 aaKnown RBP3.89□□□□□ -1.79
ATXN3-225ENST00000554214 DCKP27707 260 aa3.89□□□□□ -1.79
ATXN3-225ENST00000554214 GCAP28676 217 aa3.89□□□□□ -1.79
ATXN3-225ENST00000554214 RBMS1P29558 406 aaKnown RBP3.89□□□□□ -1.79
ATXN3-225ENST00000554214 OR1E1P30953 314 aa3.89□□□□□ -1.79
ATXN3-225ENST00000554214 MPIP34949 423 aa3.89□□□□□ -1.79
ATXN3-225ENST00000554214 TGFBR2P37173 567 aa3.89□□□□□ -1.79
ATXN3-225ENST00000554214 HPCAL1P37235 193 aa3.89□□□□□ -1.79
ATXN3-225ENST00000554214 PTGER3P43115 390 aa3.89□□□□□ -1.79
ATXN3-225ENST00000554214 NAGLUP54802 743 aa3.89□□□□□ -1.79
ATXN3-225ENST00000554214 TMEM50BP56557 158 aa3.89□□□□□ -1.79
ATXN3-225ENST00000554214 CLDN6P56747 220 aa3.89□□□□□ -1.79
ATXN3-225ENST00000554214 RAB25P57735 213 aa3.89□□□□□ -1.79
ATXN3-225ENST00000554214 NUTF2P61970 127 aaKnown RBP3.89□□□□□ -1.79
ATXN3-225ENST00000554214 HERVK_113P63132 956 aa3.89□□□□□ -1.79
ATXN3-225ENST00000554214 ERVK-25P63136 954 aa3.89□□□□□ -1.79
ATXN3-225ENST00000554214 TNNC1P63316 161 aa3.89□□□□□ -1.79
ATXN3-225ENST00000554214 CD300CQ08708 224 aa3.89□□□□□ -1.79
ATXN3-225ENST00000554214 NPRL3Q12980 569 aa3.89□□□□□ -1.79
ATXN3-225ENST00000554214 SCGB2A2Q13296 93 aa3.89□□□□□ -1.79
ATXN3-225ENST00000554214 BTN1A1Q13410 526 aa3.89□□□□□ -1.79
ATXN3-225ENST00000554214 IL18R1Q13478 541 aa3.89□□□□□ -1.79
ATXN3-225ENST00000554214 KCNJ11Q14654 390 aa3.89□□□□□ -1.79
ATXN3-225ENST00000554214 IRF4Q15306 451 aa3.89□□□□□ -1.79
ATXN3-225ENST00000554214 GPR33Q49SQ1 333 aa3.89□□□□□ -1.79
ATXN3-225ENST00000554214 ACSBG2Q5FVE4 666 aa3.89□□□□□ -1.79
ATXN3-225ENST00000554214 RNASE10Q5GAN6 216 aaKnown RBP3.89□□□□□ -1.79
ATXN3-225ENST00000554214 TCTEX1D4Q5JR98 221 aa3.89□□□□□ -1.79
ATXN3-225ENST00000554214 KRT80Q6KB66 452 aa3.89□□□□□ -1.79
ATXN3-225ENST00000554214 PRR27Q6MZM9 219 aa3.89□□□□□ -1.79
ATXN3-225ENST00000554214 LRRN1Q6UXK5 716 aa3.89□□□□□ -1.79
ATXN3-225ENST00000554214 MFSD6LQ8IWD5 586 aa3.89□□□□□ -1.79
ATXN3-225ENST00000554214 GPR137CQ8N3F9 429 aa3.89□□□□□ -1.79
ATXN3-225ENST00000554214 EIF4E3Q8N5X7 224 aaKnown RBP3.89□□□□□ -1.79
ATXN3-225ENST00000554214 COMMD1Q8N668 190 aa3.89□□□□□ -1.79
ATXN3-225ENST00000554214 PACRGLQ8N7B6 248 aa3.89□□□□□ -1.79
ATXN3-225ENST00000554214 Q8N9G6 341 aaPredicted RBP3.89□□□□□ -1.79
ATXN3-225ENST00000554214 TC2NQ8N9U0 490 aa3.89□□□□□ -1.79
ATXN3-225ENST00000554214 SYT14Q8NB59 555 aa3.89□□□□□ -1.79
ATXN3-225ENST00000554214 POGLUT1Q8NBL1 392 aa3.89□□□□□ -1.79
ATXN3-225ENST00000554214 CCDC54Q8NEL0 328 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms