RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 OR4K15Q8NH41 348 aa8.7□□□□□ -1.02
SIX4-202ENST00000554079 ZCCHC10Q8TBK6 192 aa8.7□□□□□ -1.02
SIX4-202ENST00000554079 SLC25A43Q8WUT9 341 aaPredicted RBP8.7□□□□□ -1.02
SIX4-202ENST00000554079 DCUN1D4Q92564 292 aa8.7□□□□□ -1.02
SIX4-202ENST00000554079 FAM46AQ96IP4 442 aaKnown RBP8.7□□□□□ -1.02
SIX4-202ENST00000554079 FAM210BQ96KR6 192 aa8.7□□□□□ -1.02
SIX4-202ENST00000554079 OR14A2Q96R54 314 aa8.7□□□□□ -1.02
SIX4-202ENST00000554079 MED20Q9H944 212 aa8.7□□□□□ -1.02
SIX4-202ENST00000554079 PDFQ9HBH1 243 aa8.7□□□□□ -1.02
SIX4-202ENST00000554079 LPAR2Q9HBW0 351 aa8.7□□□□□ -1.02
SIX4-202ENST00000554079 GRHPRQ9UBQ7 328 aa8.7□□□□□ -1.02
SIX4-202ENST00000554079 UPB1Q9UBR1 384 aa8.7□□□□□ -1.02
SIX4-202ENST00000554079 SLC22A14Q9Y267 594 aa8.7□□□□□ -1.02
SIX4-202ENST00000554079 NOP16Q9Y3C1 178 aaKnown RBP8.7□□□□□ -1.02
SIX4-202ENST00000554079 CSAG2Q9Y5P2 127 aa8.7□□□□□ -1.02
SIX4-202ENST00000554079 UMAD1C9J7I0 102 aa8.69□□□□□ -1.02
SIX4-202ENST00000554079 EFSO43281 561 aa8.69□□□□□ -1.02
SIX4-202ENST00000554079 TCF21O43680 179 aa8.69□□□□□ -1.02
SIX4-202ENST00000554079 CIDEAO60543 219 aa8.69□□□□□ -1.02
SIX4-202ENST00000554079 LRP3O75074 770 aa8.69□□□□□ -1.02
SIX4-202ENST00000554079 APODP05090 189 aa8.69□□□□□ -1.02
SIX4-202ENST00000554079 EPHA1P21709 976 aa8.69□□□□□ -1.02
SIX4-202ENST00000554079 PCSK1P29120 753 aa8.69□□□□□ -1.02
SIX4-202ENST00000554079 SERPINF1P36955 418 aa8.69□□□□□ -1.02
SIX4-202ENST00000554079 AQP2P41181 271 aa8.69□□□□□ -1.02
SIX4-202ENST00000554079 ADCYAP1R1P41586 468 aa8.69□□□□□ -1.02
SIX4-202ENST00000554079 PPICP45877 212 aa8.69□□□□□ -1.02
SIX4-202ENST00000554079 RGRP47804 291 aa8.69□□□□□ -1.02
SIX4-202ENST00000554079 OR3A1P47881 315 aa8.69□□□□□ -1.02
SIX4-202ENST00000554079 UCP2P55851 309 aa8.69□□□□□ -1.02
SIX4-202ENST00000554079 LILRA4P59901 499 aa8.69□□□□□ -1.02
SIX4-202ENST00000554079 MC1RQ01726 317 aa8.69□□□□□ -1.02
SIX4-202ENST00000554079 GUCA2AQ02747 115 aa8.69□□□□□ -1.02
SIX4-202ENST00000554079 CDK5R1Q15078 307 aa8.69□□□□□ -1.02
SIX4-202ENST00000554079 ELOBQ15370 118 aa8.69□□□□□ -1.02
SIX4-202ENST00000554079 RIPPLY2Q5TAB7 128 aa8.69□□□□□ -1.02
SIX4-202ENST00000554079 NCR3LG1Q68D85 454 aa8.69□□□□□ -1.02
SIX4-202ENST00000554079 OR2T2Q6IF00 324 aa8.69□□□□□ -1.02
SIX4-202ENST00000554079 DCXRQ7Z4W1 244 aa8.69□□□□□ -1.02
SIX4-202ENST00000554079 C16orf78Q8WTQ4 265 aa8.69□□□□□ -1.02
SIX4-202ENST00000554079 SMIM19Q96E16 107 aa8.69□□□□□ -1.02
SIX4-202ENST00000554079 DTD2Q96FN9 168 aa8.69□□□□□ -1.02
SIX4-202ENST00000554079 OR2M4Q96R27 311 aa8.69□□□□□ -1.02
SIX4-202ENST00000554079 RNF126Q9BV68 326 aa8.69□□□□□ -1.02
SIX4-202ENST00000554079 HCAR1Q9BXC0 346 aa8.69□□□□□ -1.02
SIX4-202ENST00000554079 SLC25A18Q9H1K4 315 aa8.69□□□□□ -1.02
SIX4-202ENST00000554079 CXorf36Q9H7Y0 433 aa8.69□□□□□ -1.02
SIX4-202ENST00000554079 PLEKHA2Q9HB19 425 aa8.69□□□□□ -1.02
SIX4-202ENST00000554079 CSNK1G1Q9HCP0 422 aa8.69□□□□□ -1.02
SIX4-202ENST00000554079 CHST11Q9NPF2 352 aa8.69□□□□□ -1.02
SIX4-202ENST00000554079 TICRRQ7Z2Z1 1910 aa8.69□□□□□ -1.02
SIX4-202ENST00000554079 TVP23AA6NH52 213 aa8.68□□□□□ -1.02
SIX4-202ENST00000554079 MSGN1A6NI15 193 aa8.68□□□□□ -1.02
SIX4-202ENST00000554079 FAM171A2A8MVW0 826 aa8.68□□□□□ -1.02
SIX4-202ENST00000554079 GAPDHSO14556 408 aaPredicted RBP8.68□□□□□ -1.02
SIX4-202ENST00000554079 SYT7O43581 403 aa8.68□□□□□ -1.02
SIX4-202ENST00000554079 ABLIM3O94929 683 aa8.68□□□□□ -1.02
SIX4-202ENST00000554079 TBX6O95947 436 aaPredicted RBP8.68□□□□□ -1.02
SIX4-202ENST00000554079 TGFB1P01137 390 aa8.68□□□□□ -1.02
SIX4-202ENST00000554079 GBAP04062 536 aa8.68□□□□□ -1.02
SIX4-202ENST00000554079 CD3DP04234 171 aa8.68□□□□□ -1.02
SIX4-202ENST00000554079 C8GP07360 202 aa8.68□□□□□ -1.02
SIX4-202ENST00000554079 TRGC1P0CF51 173 aa8.68□□□□□ -1.02
SIX4-202ENST00000554079 ZNF7P17097 686 aaPredicted RBP8.68□□□□□ -1.02
SIX4-202ENST00000554079 SNCAP37840 140 aa8.68□□□□□ -1.02
SIX4-202ENST00000554079 PGFP49763 221 aa8.68□□□□□ -1.02
SIX4-202ENST00000554079 NPY4RP50391 375 aa8.68□□□□□ -1.02
SIX4-202ENST00000554079 ERVFC1-1P60608 527 aa8.68□□□□□ -1.02
SIX4-202ENST00000554079 XKR4Q5GH76 650 aa8.68□□□□□ -1.02
SIX4-202ENST00000554079 AWAT2Q6E213 333 aa8.68□□□□□ -1.02
SIX4-202ENST00000554079 ZNF529Q6P280 563 aa8.68□□□□□ -1.02
SIX4-202ENST00000554079 ZNF585AQ6P3V2 769 aa8.68□□□□□ -1.02
SIX4-202ENST00000554079 ULK3Q6PHR2 472 aa8.68□□□□□ -1.02
SIX4-202ENST00000554079 SERPINA9Q86WD7 417 aa8.68□□□□□ -1.02
SIX4-202ENST00000554079 CLEC1AQ8NC01 280 aa8.68□□□□□ -1.02
SIX4-202ENST00000554079 ABHD5Q8WTS1 349 aa8.68□□□□□ -1.02
SIX4-202ENST00000554079 SMPDL3AQ92484 453 aa8.68□□□□□ -1.02
SIX4-202ENST00000554079 NEIL2Q969S2 332 aa8.68□□□□□ -1.02
SIX4-202ENST00000554079 SAMD8Q96LT4 415 aa8.68□□□□□ -1.02
SIX4-202ENST00000554079 STACQ99469 402 aa8.68□□□□□ -1.02
SIX4-202ENST00000554079 BRF2Q9HAW0 419 aa8.68□□□□□ -1.02
SIX4-202ENST00000554079 NOX4Q9NPH5 578 aa8.68□□□□□ -1.02
SIX4-202ENST00000554079 IL17CQ9P0M4 197 aa8.68□□□□□ -1.02
SIX4-202ENST00000554079 SEMA5BQ9P283 1151 aa8.68□□□□□ -1.02
SIX4-202ENST00000554079 ZNF346Q9UL40 294 aaKnown RBP8.68□□□□□ -1.02
SIX4-202ENST00000554079 ETV7Q9Y603 341 aa8.68□□□□□ -1.02
SIX4-202ENST00000554079 TCRBV21S2A2A0A5A6 115 aa8.68□□□□□ -1.02
SIX4-202ENST00000554079 TRDCB7Z8K6 153 aa8.68□□□□□ -1.02
SIX4-202ENST00000554079 KLF4O43474 513 aa8.68□□□□□ -1.02
SIX4-202ENST00000554079 HBP1O60381 514 aa8.68□□□□□ -1.02
SIX4-202ENST00000554079 ZNF821O75541 412 aaPredicted RBP8.68□□□□□ -1.02
SIX4-202ENST00000554079 VNN2O95498 520 aa8.68□□□□□ -1.02
SIX4-202ENST00000554079 AMBPP02760 352 aa8.68□□□□□ -1.02
SIX4-202ENST00000554079 TRGC2P03986 189 aa8.68□□□□□ -1.02
SIX4-202ENST00000554079 ASGR1P07306 291 aa8.68□□□□□ -1.02
SIX4-202ENST00000554079 SRMP19623 302 aa8.68□□□□□ -1.02
SIX4-202ENST00000554079 ZBTB25P24278 435 aa8.68□□□□□ -1.02
SIX4-202ENST00000554079 PSMB6P28072 239 aa8.68□□□□□ -1.02
SIX4-202ENST00000554079 PYCR1P32322 319 aa8.68□□□□□ -1.02
SIX4-202ENST00000554079 GPR15P49685 360 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 316.2 ms