RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 C11orf65Q8NCR3 313 aa7.74□□□□□ -1.17
TDP1-208ENST00000553989 ELOA3Q8NG57 546 aa7.74□□□□□ -1.17
TDP1-208ENST00000553989 RNF217Q8TC41 542 aa7.74□□□□□ -1.17
TDP1-208ENST00000553989 C10orf105Q8TEF2 133 aa7.74□□□□□ -1.17
TDP1-208ENST00000553989 XAGE5Q8WWM1 108 aa7.74□□□□□ -1.17
TDP1-208ENST00000553989 PROX1Q92786 737 aa7.74□□□□□ -1.17
TDP1-208ENST00000553989 DDIT4LQ96D03 193 aa7.74□□□□□ -1.17
TDP1-208ENST00000553989 YIPF6Q96EC8 236 aa7.74□□□□□ -1.17
TDP1-208ENST00000553989 FBXO17Q96EF6 278 aa7.74□□□□□ -1.17
TDP1-208ENST00000553989 ARL5BQ96KC2 179 aa7.74□□□□□ -1.17
TDP1-208ENST00000553989 PIMREGQ9BSJ6 248 aa7.74□□□□□ -1.17
TDP1-208ENST00000553989 NAA11Q9BSU3 229 aaPredicted RBP7.74□□□□□ -1.17
TDP1-208ENST00000553989 OR11A1Q9GZK7 315 aa7.74□□□□□ -1.17
TDP1-208ENST00000553989 CCDC90BQ9GZT6 254 aa7.74□□□□□ -1.17
TDP1-208ENST00000553989 ZNF350Q9GZX5 532 aa7.74□□□□□ -1.17
TDP1-208ENST00000553989 SERHL2Q9H4I8 314 aa7.74□□□□□ -1.17
TDP1-208ENST00000553989 IKZF5Q9H5V7 419 aa7.74□□□□□ -1.17
TDP1-208ENST00000553989 TPT1P8Q9HAU6 139 aa7.74□□□□□ -1.17
TDP1-208ENST00000553989 KRT84Q9NSB2 600 aa7.74□□□□□ -1.17
TDP1-208ENST00000553989 PARPBPQ9NWS1 579 aa7.74□□□□□ -1.17
TDP1-208ENST00000553989 TMEM160Q9NX00 188 aa7.74□□□□□ -1.17
TDP1-208ENST00000553989 PLA2G2EQ9NZK7 142 aa7.74□□□□□ -1.17
TDP1-208ENST00000553989 PDP1Q9P0J1 537 aaPredicted RBP7.74□□□□□ -1.17
TDP1-208ENST00000553989 MALT1Q9UDY8 824 aa7.74□□□□□ -1.17
TDP1-208ENST00000553989 KCNE5Q9UJ90 142 aa7.74□□□□□ -1.17
TDP1-208ENST00000553989 SLC9A8Q9Y2E8 581 aa7.74□□□□□ -1.17
TDP1-208ENST00000553989 AMDHD2Q9Y303 409 aa7.74□□□□□ -1.17
TDP1-208ENST00000553989 HDGFL3Q9Y3E1 203 aa7.74□□□□□ -1.17
TDP1-208ENST00000553989 SAMHD1Q9Y3Z3 626 aaKnown RBP7.74□□□□□ -1.17
TDP1-208ENST00000553989 LOC100289279A0A1B0GTE1 492 aa7.73□□□□□ -1.17
TDP1-208ENST00000553989 ISPDA4D126 451 aa7.73□□□□□ -1.17
TDP1-208ENST00000553989 E9PQ18 207 aa7.73□□□□□ -1.17
TDP1-208ENST00000553989 ATP6V1G2-DDX39BF2Z307 99 aa7.73□□□□□ -1.17
TDP1-208ENST00000553989 DNPH1O43598 174 aa7.73□□□□□ -1.17
TDP1-208ENST00000553989 GABARAPO95166 117 aa7.73□□□□□ -1.17
TDP1-208ENST00000553989 WNT11O96014 354 aa7.73□□□□□ -1.17
TDP1-208ENST00000553989 ITGA5P08648 1049 aa7.73□□□□□ -1.17
TDP1-208ENST00000553989 APEHP13798 732 aaKnown RBP7.73□□□□□ -1.17
TDP1-208ENST00000553989 FKBP2P26885 142 aaKnown RBP7.73□□□□□ -1.17
TDP1-208ENST00000553989 APOBEC3AP31941 199 aaPredicted RBP7.73□□□□□ -1.17
TDP1-208ENST00000553989 PCGF2P35227 344 aa7.73□□□□□ -1.17
TDP1-208ENST00000553989 IDH2P48735 452 aaKnown RBP7.73□□□□□ -1.17
TDP1-208ENST00000553989 KHKP50053 298 aa7.73□□□□□ -1.17
TDP1-208ENST00000553989 FOXG1P55316 489 aaPredicted RBP7.73□□□□□ -1.17
TDP1-208ENST00000553989 PRPS1P60891 318 aa7.73□□□□□ -1.17
TDP1-208ENST00000553989 SLC35A2P78381 396 aa7.73□□□□□ -1.17
TDP1-208ENST00000553989 SLC35A1P78382 337 aa7.73□□□□□ -1.17
TDP1-208ENST00000553989 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.73□□□□□ -1.17
TDP1-208ENST00000553989 MAD2L1BPQ15013 274 aaPredicted RBP7.73□□□□□ -1.17
TDP1-208ENST00000553989 GABRA6Q16445 453 aa7.73□□□□□ -1.17
TDP1-208ENST00000553989 MAPK14Q16539 360 aa7.73□□□□□ -1.17
TDP1-208ENST00000553989 KRTAP24-1Q3LI83 254 aa7.73□□□□□ -1.17
TDP1-208ENST00000553989 ARSJQ5FYB0 599 aaPredicted RBP7.73□□□□□ -1.17
TDP1-208ENST00000553989 TYW3Q6IPR3 259 aaKnown RBP7.73□□□□□ -1.17
TDP1-208ENST00000553989 LAIR2Q6ISS4 152 aa7.73□□□□□ -1.17
TDP1-208ENST00000553989 CCDC80Q76M96 950 aa7.73□□□□□ -1.17
TDP1-208ENST00000553989 SLC46A3Q7Z3Q1 461 aa7.73□□□□□ -1.17
TDP1-208ENST00000553989 TMEM179BQ7Z7N9 219 aa7.73□□□□□ -1.17
TDP1-208ENST00000553989 ANKRD46Q86W74 232 aa7.73□□□□□ -1.17
TDP1-208ENST00000553989 EGFL6Q8IUX8 553 aa7.73□□□□□ -1.17
TDP1-208ENST00000553989 C17orf78Q8N4C9 275 aa7.73□□□□□ -1.17
TDP1-208ENST00000553989 FAM86B1Q8N7N1 296 aa7.73□□□□□ -1.17
TDP1-208ENST00000553989 ARIH2OSQ8N7S6 290 aa7.73□□□□□ -1.17
TDP1-208ENST00000553989 ZNF540Q8NDQ6 660 aa7.73□□□□□ -1.17
TDP1-208ENST00000553989 RAB8BQ92930 207 aa7.73□□□□□ -1.17
TDP1-208ENST00000553989 SLC38A4Q969I6 547 aa7.73□□□□□ -1.17
TDP1-208ENST00000553989 HRASLS5Q96KN8 279 aa7.73□□□□□ -1.17
TDP1-208ENST00000553989 PITX2Q99697 317 aa7.73□□□□□ -1.17
TDP1-208ENST00000553989 VRK1Q99986 396 aaPredicted RBP7.73□□□□□ -1.17
TDP1-208ENST00000553989 C19orf24Q9BVV8 132 aa7.73□□□□□ -1.17
TDP1-208ENST00000553989 MMP27Q9H306 513 aa7.73□□□□□ -1.17
TDP1-208ENST00000553989 RIBC2Q9H4K1 309 aa7.73□□□□□ -1.17
TDP1-208ENST00000553989 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.73□□□□□ -1.17
TDP1-208ENST00000553989 KIF17Q9P2E2 1029 aa7.73□□□□□ -1.17
TDP1-208ENST00000553989 ERVK-18Q9QC07 812 aa7.73□□□□□ -1.17
TDP1-208ENST00000553989 ALPK2Q86TB3 2170 aa7.73□□□□□ -1.17
TDP1-208ENST00000553989 TMED7-TICAM2A0A0A6YYA0 188 aa7.72□□□□□ -1.17
TDP1-208ENST00000553989 TMEM72A0PK05 275 aa7.72□□□□□ -1.17
TDP1-208ENST00000553989 TNFRSF11BO00300 401 aa7.72□□□□□ -1.17
TDP1-208ENST00000553989 EIF1BO60739 113 aaKnown RBP7.72□□□□□ -1.17
TDP1-208ENST00000553989 FAM20BO75063 409 aa7.72□□□□□ -1.17
TDP1-208ENST00000553989 INMTO95050 263 aa7.72□□□□□ -1.17
TDP1-208ENST00000553989 IL7RP16871 459 aa7.72□□□□□ -1.17
TDP1-208ENST00000553989 UQCRC2P22695 453 aa7.72□□□□□ -1.17
TDP1-208ENST00000553989 CD40LGP29965 261 aa7.72□□□□□ -1.17
TDP1-208ENST00000553989 CDKN2CP42773 168 aa7.72□□□□□ -1.17
TDP1-208ENST00000553989 HTR3AP46098 478 aa7.72□□□□□ -1.17
TDP1-208ENST00000553989 CLK1P49759 484 aaKnown RBP7.72□□□□□ -1.17
TDP1-208ENST00000553989 BCAP31P51572 246 aa7.72□□□□□ -1.17
TDP1-208ENST00000553989 POLR2HP52434 150 aaKnown RBP7.72□□□□□ -1.17
TDP1-208ENST00000553989 HMGA2P52926 109 aa7.72□□□□□ -1.17
TDP1-208ENST00000553989 SLC16A1P53985 500 aa7.72□□□□□ -1.17
TDP1-208ENST00000553989 KCNJ10P78508 379 aa7.72□□□□□ -1.17
TDP1-208ENST00000553989 SRSF2Q01130 221 aaKnown RBP7.72□□□□□ -1.17
TDP1-208ENST00000553989 RGNQ15493 299 aa7.72□□□□□ -1.17
TDP1-208ENST00000553989 CTF1Q16619 201 aa7.72□□□□□ -1.17
TDP1-208ENST00000553989 TRIM16LQ309B1 348 aa7.72□□□□□ -1.17
TDP1-208ENST00000553989 GTDC1Q4AE62 458 aa7.72□□□□□ -1.17
TDP1-208ENST00000553989 IFI44LQ53G44 452 aa7.72□□□□□ -1.17
TDP1-208ENST00000553989 TSPO2Q5TGU0 170 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms