RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 C20orf141Q9NUB4 165 aa7.3□□□□□ -1.24
PSEN1-209ENST00000553855 CCM2LQ9NUG4 571 aaPredicted RBP7.3□□□□□ -1.24
PSEN1-209ENST00000553855 TAS2R5Q9NYW4 299 aa7.3□□□□□ -1.24
PSEN1-209ENST00000553855 TAS2R1Q9NYW7 299 aa7.3□□□□□ -1.24
PSEN1-209ENST00000553855 GRHPRQ9UBQ7 328 aa7.3□□□□□ -1.24
PSEN1-209ENST00000553855 FBXL3Q9UKT7 428 aa7.3□□□□□ -1.24
PSEN1-209ENST00000553855 SLC25A15Q9Y619 301 aa7.3□□□□□ -1.24
PSEN1-209ENST00000553855 ATP23Q9Y6H3 246 aa7.3□□□□□ -1.24
PSEN1-209ENST00000553855 C2CD3Q4AC94 2353 aa7.3□□□□□ -1.24
PSEN1-209ENST00000553855 NOTCH2Q04721 2471 aa7.29□□□□□ -1.24
PSEN1-209ENST00000553855 TRAV27A0A087WT01 109 aa7.29□□□□□ -1.24
PSEN1-209ENST00000553855 ARPC4-TTLL3A0A0A6YYG9 625 aa7.29□□□□□ -1.24
PSEN1-209ENST00000553855 NPIPB13A6NJU9 1138 aa7.29□□□□□ -1.24
PSEN1-209ENST00000553855 NPIPB4C9JG80 1138 aa7.29□□□□□ -1.24
PSEN1-209ENST00000553855 TNFRSF11BO00300 401 aa7.29□□□□□ -1.24
PSEN1-209ENST00000553855 GNGT2O14610 69 aa7.29□□□□□ -1.24
PSEN1-209ENST00000553855 FFAR1O14842 300 aa7.29□□□□□ -1.24
PSEN1-209ENST00000553855 DHHO43323 396 aa7.29□□□□□ -1.24
PSEN1-209ENST00000553855 MGRN1O60291 552 aa7.29□□□□□ -1.24
PSEN1-209ENST00000553855 DIRAS1O95057 198 aa7.29□□□□□ -1.24
PSEN1-209ENST00000553855 UBL3O95164 117 aa7.29□□□□□ -1.24
PSEN1-209ENST00000553855 NDUFB2O95178 105 aa7.29□□□□□ -1.24
PSEN1-209ENST00000553855 T-ENOLP0DO92 83 aa7.29□□□□□ -1.24
PSEN1-209ENST00000553855 CD79AP11912 226 aa7.29□□□□□ -1.24
PSEN1-209ENST00000553855 ACADSP16219 412 aa7.29□□□□□ -1.24
PSEN1-209ENST00000553855 CD40P25942 277 aa7.29□□□□□ -1.24
PSEN1-209ENST00000553855 ARR3P36575 388 aa7.29□□□□□ -1.24
PSEN1-209ENST00000553855 ACVR1BP36896 505 aa7.29□□□□□ -1.24
PSEN1-209ENST00000553855 GPR4P46093 362 aa7.29□□□□□ -1.24
PSEN1-209ENST00000553855 RPS6KA3P51812 740 aa7.29□□□□□ -1.24
PSEN1-209ENST00000553855 IST1P53990 364 aa7.29□□□□□ -1.24
PSEN1-209ENST00000553855 CDH11P55287 796 aa7.29□□□□□ -1.24
PSEN1-209ENST00000553855 FOXG1P55316 489 aaPredicted RBP7.29□□□□□ -1.24
PSEN1-209ENST00000553855 CTXN1P60606 82 aa7.29□□□□□ -1.24
PSEN1-209ENST00000553855 LGALS3BPQ08380 585 aa7.29□□□□□ -1.24
PSEN1-209ENST00000553855 DOC2BQ14184 412 aa7.29□□□□□ -1.24
PSEN1-209ENST00000553855 ZBED5Q49AG3 693 aa7.29□□□□□ -1.24
PSEN1-209ENST00000553855 LCN8Q6JVE9 175 aa7.29□□□□□ -1.24
PSEN1-209ENST00000553855 ADAM5Q6NVV9 412 aa7.29□□□□□ -1.24
PSEN1-209ENST00000553855 TMEM53Q6P2H8 277 aa7.29□□□□□ -1.24
PSEN1-209ENST00000553855 TBPL2Q6SJ96 375 aa7.29□□□□□ -1.24
PSEN1-209ENST00000553855 TMPRSS11FQ6ZWK6 438 aa7.29□□□□□ -1.24
PSEN1-209ENST00000553855 PIWIL3Q7Z3Z3 882 aaKnown RBP7.29□□□□□ -1.24
PSEN1-209ENST00000553855 DPPA2Q7Z7J5 298 aa7.29□□□□□ -1.24
PSEN1-209ENST00000553855 TMEM123Q8N131 208 aa7.29□□□□□ -1.24
PSEN1-209ENST00000553855 FBXL14Q8N1E6 418 aa7.29□□□□□ -1.24
PSEN1-209ENST00000553855 ZNF611Q8N823 705 aa7.29□□□□□ -1.24
PSEN1-209ENST00000553855 NOXO1Q8NFA2 376 aa7.29□□□□□ -1.24
PSEN1-209ENST00000553855 IL17RDQ8NFM7 739 aa7.29□□□□□ -1.24
PSEN1-209ENST00000553855 OR4K5Q8NGD3 323 aa7.29□□□□□ -1.24
PSEN1-209ENST00000553855 MOSPD2Q8NHP6 518 aa7.29□□□□□ -1.24
PSEN1-209ENST00000553855 SLC7A13Q8TCU3 470 aa7.29□□□□□ -1.24
PSEN1-209ENST00000553855 NRGNQ92686 78 aa7.29□□□□□ -1.24
PSEN1-209ENST00000553855 BCL2L2Q92843 193 aaPredicted RBP7.29□□□□□ -1.24
PSEN1-209ENST00000553855 TRMT61AQ96FX7 289 aaKnown RBP7.29□□□□□ -1.24
PSEN1-209ENST00000553855 C7orf34Q96L11 122 aa7.29□□□□□ -1.24
PSEN1-209ENST00000553855 SLC38A2Q96QD8 506 aa7.29□□□□□ -1.24
PSEN1-209ENST00000553855 ALPK1Q96QP1 1244 aa7.29□□□□□ -1.24
PSEN1-209ENST00000553855 TXNIPQ9H3M7 391 aa7.29□□□□□ -1.24
PSEN1-209ENST00000553855 C7orf69Q9H7B7 122 aa7.29□□□□□ -1.24
PSEN1-209ENST00000553855 RNF121Q9H920 327 aa7.29□□□□□ -1.24
PSEN1-209ENST00000553855 BEX4Q9NWD9 120 aaPredicted RBP7.29□□□□□ -1.24
PSEN1-209ENST00000553855 CISD1Q9NZ45 108 aaKnown RBP7.29□□□□□ -1.24
PSEN1-209ENST00000553855 SPEF1Q9Y4P9 236 aa7.29□□□□□ -1.24
PSEN1-209ENST00000553855 ITPR3Q14573 2671 aa7.29□□□□□ -1.24
PSEN1-209ENST00000553855 CACNA1DQ01668 2161 aa7.29□□□□□ -1.24
PSEN1-209ENST00000553855 CENPEQ02224 2701 aa7.28□□□□□ -1.24
PSEN1-209ENST00000553855 DPRXA6NFQ7 191 aa7.28□□□□□ -1.24
PSEN1-209ENST00000553855 UNC119BA6NIH7 251 aa7.28□□□□□ -1.24
PSEN1-209ENST00000553855 AQP12BA6NM10 295 aa7.28□□□□□ -1.24
PSEN1-209ENST00000553855 TRMUO75648 421 aaKnown RBP7.28□□□□□ -1.24
PSEN1-209ENST00000553855 CCNB2O95067 398 aa7.28□□□□□ -1.24
PSEN1-209ENST00000553855 PRSS23O95084 383 aa7.28□□□□□ -1.24
PSEN1-209ENST00000553855 PTHP01270 115 aa7.28□□□□□ -1.24
PSEN1-209ENST00000553855 QDPRP09417 244 aa7.28□□□□□ -1.24
PSEN1-209ENST00000553855 OR8G3PP0DMU2 310 aa7.28□□□□□ -1.24
PSEN1-209ENST00000553855 RAP2AP10114 183 aa7.28□□□□□ -1.24
PSEN1-209ENST00000553855 CBR1P16152 277 aa7.28□□□□□ -1.24
PSEN1-209ENST00000553855 MAKP20794 623 aa7.28□□□□□ -1.24
PSEN1-209ENST00000553855 ATP6V1B2P21281 511 aa7.28□□□□□ -1.24
PSEN1-209ENST00000553855 FABP6P51161 128 aa7.28□□□□□ -1.24
PSEN1-209ENST00000553855 MECP2P51608 486 aaKnown RBP7.28□□□□□ -1.24
PSEN1-209ENST00000553855 ARHGDIAP52565 204 aa7.28□□□□□ -1.24
PSEN1-209ENST00000553855 RPL27P61353 136 aaKnown RBP7.28□□□□□ -1.24
PSEN1-209ENST00000553855 RPS4XP62701 263 aaKnown RBP7.28□□□□□ -1.24
PSEN1-209ENST00000553855 PLP2Q04941 152 aa7.28□□□□□ -1.24
PSEN1-209ENST00000553855 NPRL3Q12980 569 aa7.28□□□□□ -1.24
PSEN1-209ENST00000553855 FLOT2Q14254 428 aa7.28□□□□□ -1.24
PSEN1-209ENST00000553855 GSG1Q2KHT4 349 aa7.28□□□□□ -1.24
PSEN1-209ENST00000553855 DEFB113Q30KQ7 82 aa7.28□□□□□ -1.24
PSEN1-209ENST00000553855 SLC36A2Q495M3 483 aa7.28□□□□□ -1.24
PSEN1-209ENST00000553855 ZNF672Q499Z4 452 aaPredicted RBP7.28□□□□□ -1.24
PSEN1-209ENST00000553855 THEM4Q5T1C6 240 aa7.28□□□□□ -1.24
PSEN1-209ENST00000553855 AGAP6Q5VW22 663 aa7.28□□□□□ -1.24
PSEN1-209ENST00000553855 SLC16A14Q7RTX9 510 aa7.28□□□□□ -1.24
PSEN1-209ENST00000553855 ZBTB46Q86UZ6 589 aa7.28□□□□□ -1.24
PSEN1-209ENST00000553855 IGFN1Q86VF2 1251 aa7.28□□□□□ -1.24
PSEN1-209ENST00000553855 SPATA24Q86W54 205 aa7.28□□□□□ -1.24
PSEN1-209ENST00000553855 AQP12AQ8IXF9 295 aa7.28□□□□□ -1.24
PSEN1-209ENST00000553855 FAM86B1Q8N7N1 296 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms