RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-208ENST00000553846 VSIG8P0DPA2 414 aa7.57□□□□□ -1.2
PRKCH-208ENST00000553846 NR2F1P10589 423 aa7.57□□□□□ -1.2
PRKCH-208ENST00000553846 KRT4P19013 534 aa7.57□□□□□ -1.2
PRKCH-208ENST00000553846 GTF2E2P29084 291 aaKnown RBP7.57□□□□□ -1.2
PRKCH-208ENST00000553846 IL12AP29459 219 aa7.57□□□□□ -1.2
PRKCH-208ENST00000553846 CCT5P48643 541 aa7.57□□□□□ -1.2
PRKCH-208ENST00000553846 CSNK1A1P48729 337 aa7.57□□□□□ -1.2
PRKCH-208ENST00000553846 BTG1P62324 171 aa7.57□□□□□ -1.2
PRKCH-208ENST00000553846 PUDPQ08623 228 aa7.57□□□□□ -1.2
PRKCH-208ENST00000553846 MAD2L1Q13257 205 aaPredicted RBP7.57□□□□□ -1.2
PRKCH-208ENST00000553846 PDCD1Q15116 288 aa7.57□□□□□ -1.2
PRKCH-208ENST00000553846 HIST3H3Q16695 136 aa7.57□□□□□ -1.2
PRKCH-208ENST00000553846 C2orf68Q2NKX9 166 aa7.57□□□□□ -1.2
PRKCH-208ENST00000553846 NRN1LQ496H8 165 aa7.57□□□□□ -1.2
PRKCH-208ENST00000553846 RPS26P11Q5JNZ5 115 aaPredicted RBP7.57□□□□□ -1.2
PRKCH-208ENST00000553846 REC114Q7Z4M0 266 aa7.57□□□□□ -1.2
PRKCH-208ENST00000553846 NET1Q7Z628 596 aaPredicted RBP7.57□□□□□ -1.2
PRKCH-208ENST00000553846 PXKQ7Z7A4 578 aa7.57□□□□□ -1.2
PRKCH-208ENST00000553846 DPPA2Q7Z7J5 298 aa7.57□□□□□ -1.2
PRKCH-208ENST00000553846 OR4K5Q8NGD3 323 aa7.57□□□□□ -1.2
PRKCH-208ENST00000553846 OR1J1Q8NGS3 322 aa7.57□□□□□ -1.2
PRKCH-208ENST00000553846 KLF14Q8TD94 323 aaPredicted RBP7.57□□□□□ -1.2
PRKCH-208ENST00000553846 POM121L2Q96KW2 1035 aa7.57□□□□□ -1.2
PRKCH-208ENST00000553846 ZIM3Q96PE6 472 aa7.57□□□□□ -1.2
PRKCH-208ENST00000553846 ARHGDIGQ99819 225 aa7.57□□□□□ -1.2
PRKCH-208ENST00000553846 AKTIPQ9H8T0 292 aa7.57□□□□□ -1.2
PRKCH-208ENST00000553846 CDH20Q9HBT6 801 aa7.57□□□□□ -1.2
PRKCH-208ENST00000553846 B3GAT2Q9NPZ5 323 aa7.57□□□□□ -1.2
PRKCH-208ENST00000553846 GLTPQ9NZD2 209 aa7.57□□□□□ -1.2
PRKCH-208ENST00000553846 TRIM33Q9UPN9 1127 aa7.57□□□□□ -1.2
PRKCH-208ENST00000553846 LRCH1Q9Y2L9 728 aa7.57□□□□□ -1.2
PRKCH-208ENST00000553846 POMT1Q9Y6A1 747 aa7.57□□□□□ -1.2
PRKCH-208ENST00000553846 LOC100509620A0A075B734 347 aa7.56□□□□□ -1.2
PRKCH-208ENST00000553846 KIR2DS1A0A191URI9 304 aa7.56□□□□□ -1.2
PRKCH-208ENST00000553846 LRRN3E7EW58 273 aa7.56□□□□□ -1.2
PRKCH-208ENST00000553846 E9PBE3 544 aa7.56□□□□□ -1.2
PRKCH-208ENST00000553846 H3BSA7 217 aa7.56□□□□□ -1.2
PRKCH-208ENST00000553846 COPEO14579 308 aa7.56□□□□□ -1.2
PRKCH-208ENST00000553846 TNFRSF13BO14836 293 aaPredicted RBP7.56□□□□□ -1.2
PRKCH-208ENST00000553846 TPD52L2O43399 206 aaKnown RBP7.56□□□□□ -1.2
PRKCH-208ENST00000553846 MGRN1O60291 552 aa7.56□□□□□ -1.2
PRKCH-208ENST00000553846 GPR137BO60478 399 aa7.56□□□□□ -1.2
PRKCH-208ENST00000553846 PGA4P0DJD7 388 aa7.56□□□□□ -1.2
PRKCH-208ENST00000553846 PGA3P0DJD8 388 aa7.56□□□□□ -1.2
PRKCH-208ENST00000553846 ETFAP13804 333 aa7.56□□□□□ -1.2
PRKCH-208ENST00000553846 NCF2P19878 526 aaPredicted RBP7.56□□□□□ -1.2
PRKCH-208ENST00000553846 CBLP22681 906 aa7.56□□□□□ -1.2
PRKCH-208ENST00000553846 SERPINB5P36952 375 aa7.56□□□□□ -1.2
PRKCH-208ENST00000553846 ZNF133P52736 654 aaPredicted RBP7.56□□□□□ -1.2
PRKCH-208ENST00000553846 CDK5R2Q13319 367 aa7.56□□□□□ -1.2
PRKCH-208ENST00000553846 MOGQ16653 247 aa7.56□□□□□ -1.2
PRKCH-208ENST00000553846 TBC1D28Q2M2D7 210 aa7.56□□□□□ -1.2
PRKCH-208ENST00000553846 DPY19L1Q2PZI1 675 aa7.56□□□□□ -1.2
PRKCH-208ENST00000553846 VAX1Q5SQQ9 334 aa7.56□□□□□ -1.2
PRKCH-208ENST00000553846 SPATA46Q5T0L3 261 aa7.56□□□□□ -1.2
PRKCH-208ENST00000553846 THEM4Q5T1C6 240 aa7.56□□□□□ -1.2
PRKCH-208ENST00000553846 LRRN1Q6UXK5 716 aa7.56□□□□□ -1.2
PRKCH-208ENST00000553846 ZNF620Q6ZNG0 422 aa7.56□□□□□ -1.2
PRKCH-208ENST00000553846 Q6ZR03 302 aa7.56□□□□□ -1.2
PRKCH-208ENST00000553846 SNX32Q86XE0 403 aa7.56□□□□□ -1.2
PRKCH-208ENST00000553846 C4orf33Q8N1A6 199 aa7.56□□□□□ -1.2
PRKCH-208ENST00000553846 KLHL36Q8N4N3 616 aa7.56□□□□□ -1.2
PRKCH-208ENST00000553846 FITM2Q8N6M3 262 aa7.56□□□□□ -1.2
PRKCH-208ENST00000553846 CCDC63Q8NA47 563 aa7.56□□□□□ -1.2
PRKCH-208ENST00000553846 ZSCAN4Q8NAM6 433 aaPredicted RBP7.56□□□□□ -1.2
PRKCH-208ENST00000553846 OR6N1Q8NGY5 312 aa7.56□□□□□ -1.2
PRKCH-208ENST00000553846 OR6X1Q8NH79 312 aa7.56□□□□□ -1.2
PRKCH-208ENST00000553846 DYRK2Q92630 601 aa7.56□□□□□ -1.2
PRKCH-208ENST00000553846 LYSTQ99698 3801 aa7.56□□□□□ -1.2
PRKCH-208ENST00000553846 RHOXF2Q9BQY4 288 aa7.56□□□□□ -1.2
PRKCH-208ENST00000553846 EGLN1Q9GZT9 426 aa7.56□□□□□ -1.2
PRKCH-208ENST00000553846 C16orf95Q9H693 158 aa7.56□□□□□ -1.2
PRKCH-208ENST00000553846 MSL2Q9HCI7 577 aa7.56□□□□□ -1.2
PRKCH-208ENST00000553846 TCF7L1Q9HCS4 588 aa7.56□□□□□ -1.2
PRKCH-208ENST00000553846 A4GALTQ9NPC4 353 aa7.56□□□□□ -1.2
PRKCH-208ENST00000553846 SLC17A7Q9P2U7 560 aa7.56□□□□□ -1.2
PRKCH-208ENST00000553846 P2RX2Q9UBL9 471 aa7.56□□□□□ -1.2
PRKCH-208ENST00000553846 CGGBP1Q9UFW8 167 aaPredicted RBP7.56□□□□□ -1.2
PRKCH-208ENST00000553846 OR5V1Q9UGF6 321 aa7.56□□□□□ -1.2
PRKCH-208ENST00000553846 ZDHHC8Q9ULC8 765 aa7.56□□□□□ -1.2
PRKCH-208ENST00000553846 LOC100653049A0A140TA62 436 aa7.55□□□□□ -1.2
PRKCH-208ENST00000553846 DHHO43323 396 aa7.55□□□□□ -1.2
PRKCH-208ENST00000553846 TPST2O60704 377 aa7.55□□□□□ -1.2
PRKCH-208ENST00000553846 ERLIN1O75477 346 aa7.55□□□□□ -1.2
PRKCH-208ENST00000553846 KRT34O76011 436 aa7.55□□□□□ -1.2
PRKCH-208ENST00000553846 BCHEP06276 602 aa7.55□□□□□ -1.2
PRKCH-208ENST00000553846 ALDOCP09972 364 aaKnown RBP7.55□□□□□ -1.2
PRKCH-208ENST00000553846 MMP9P14780 707 aa7.55□□□□□ -1.2
PRKCH-208ENST00000553846 DRD4P21917 467 aa7.55□□□□□ -1.2
PRKCH-208ENST00000553846 CPT2P23786 658 aa7.55□□□□□ -1.2
PRKCH-208ENST00000553846 CASQ1P31415 396 aa7.55□□□□□ -1.2
PRKCH-208ENST00000553846 MDH2P40926 338 aaKnown RBP7.55□□□□□ -1.2
PRKCH-208ENST00000553846 BIDP55957 195 aa7.55□□□□□ -1.2
PRKCH-208ENST00000553846 BPIFB3P59826 476 aa7.55□□□□□ -1.2
PRKCH-208ENST00000553846 CKAP4Q07065 602 aaKnown RBP7.55□□□□□ -1.2
PRKCH-208ENST00000553846 LARS2Q15031 903 aaKnown RBP7.55□□□□□ -1.2
PRKCH-208ENST00000553846 ESCO2Q56NI9 601 aa7.55□□□□□ -1.2
PRKCH-208ENST00000553846 RUSC1-AS1Q66K80 236 aa7.55□□□□□ -1.2
PRKCH-208ENST00000553846 Q6ZSV7 163 aa7.55□□□□□ -1.2
PRKCH-208ENST00000553846 LDLRAD3Q86YD5 345 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms