RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 CABIN1Q9Y6J0 2220 aa1.76□□□□□ -2.13
VRK1-202ENST00000553683 RAPGEF6Q8TEU7 1601 aa1.76□□□□□ -2.13
VRK1-202ENST00000553683 TNRC18O15417 2968 aaPredicted RBP1.75□□□□□ -2.13
VRK1-202ENST00000553683 MROH7-TTC4A0A0A0MT08 1334 aa1.75□□□□□ -2.13
VRK1-202ENST00000553683 PHLPP2Q6ZVD8 1323 aa1.75□□□□□ -2.13
VRK1-202ENST00000553683 IGLV2-18A0A075B6J9 118 aa1.75□□□□□ -2.13
VRK1-202ENST00000553683 IGKV1D-17A0A075B6S4 117 aa1.75□□□□□ -2.13
VRK1-202ENST00000553683 UQCRHLA0A096LP55 91 aa1.75□□□□□ -2.13
VRK1-202ENST00000553683 C15orf38-AP3S2A0A0A6YYH1 394 aa1.75□□□□□ -2.13
VRK1-202ENST00000553683 A0A0U1RQS6 177 aa1.75□□□□□ -2.13
VRK1-202ENST00000553683 C1orf232A0A0U1RR37 186 aa1.75□□□□□ -2.13
VRK1-202ENST00000553683 SERTM2A0A1B0GWG4 89 aa1.75□□□□□ -2.13
VRK1-202ENST00000553683 LRRIQ3A6PVS8 624 aaPredicted RBP1.75□□□□□ -2.13
VRK1-202ENST00000553683 A8MUI8 341 aa1.75□□□□□ -2.13
VRK1-202ENST00000553683 ZNF879B4DU55 563 aa1.75□□□□□ -2.13
VRK1-202ENST00000553683 K7ERQ8 282 aa1.75□□□□□ -2.13
VRK1-202ENST00000553683 DNALI1O14645 258 aaPredicted RBP1.75□□□□□ -2.13
VRK1-202ENST00000553683 ANGPT2O15123 496 aa1.75□□□□□ -2.13
VRK1-202ENST00000553683 ATP8B1O43520 1251 aa1.75□□□□□ -2.13
VRK1-202ENST00000553683 TRAPPC3O43617 180 aa1.75□□□□□ -2.13
VRK1-202ENST00000553683 SUPT3HO75486 399 aa1.75□□□□□ -2.13
VRK1-202ENST00000553683 CTDNEP1O95476 244 aa1.75□□□□□ -2.13
VRK1-202ENST00000553683 AP2A1O95782 977 aa1.75□□□□□ -2.13
VRK1-202ENST00000553683 C6orf47O95873 294 aa1.75□□□□□ -2.13
VRK1-202ENST00000553683 OTCP00480 354 aa1.75□□□□□ -2.13
VRK1-202ENST00000553683 IGLV2-23P01705 113 aa1.75□□□□□ -2.13
VRK1-202ENST00000553683 KRT14P02533 472 aa1.75□□□□□ -2.13
VRK1-202ENST00000553683 UQCRHP07919 91 aa1.75□□□□□ -2.13
VRK1-202ENST00000553683 PABPC4LP0CB38 370 aaKnown RBP1.75□□□□□ -2.13
VRK1-202ENST00000553683 PNMTP11086 282 aa1.75□□□□□ -2.13
VRK1-202ENST00000553683 ABOP16442 354 aa1.75□□□□□ -2.13
VRK1-202ENST00000553683 HOXB8P17481 243 aaPredicted RBP1.75□□□□□ -2.13
VRK1-202ENST00000553683 CTRB1P17538 263 aa1.75□□□□□ -2.13
VRK1-202ENST00000553683 CFL1P23528 166 aaKnown RBP1.75□□□□□ -2.13
VRK1-202ENST00000553683 BMI1P35226 326 aa1.75□□□□□ -2.13
VRK1-202ENST00000553683 PPP1R2P41236 205 aa1.75□□□□□ -2.13
VRK1-202ENST00000553683 HSPA13P48723 471 aa1.75□□□□□ -2.13
VRK1-202ENST00000553683 GPM6AP51674 278 aa1.75□□□□□ -2.13
VRK1-202ENST00000553683 CRYBB1P53674 252 aaPredicted RBP1.75□□□□□ -2.13
VRK1-202ENST00000553683 VBP1P61758 197 aa1.75□□□□□ -2.13
VRK1-202ENST00000553683 UBE2HP62256 183 aa1.75□□□□□ -2.13
VRK1-202ENST00000553683 SMARCB1Q12824 385 aa1.75□□□□□ -2.13
VRK1-202ENST00000553683 CDC20Q12834 499 aa1.75□□□□□ -2.13
VRK1-202ENST00000553683 PLD1Q13393 1074 aa1.75□□□□□ -2.13
VRK1-202ENST00000553683 COTL1Q14019 142 aa1.75□□□□□ -2.13
VRK1-202ENST00000553683 SELPLGQ14242 412 aa1.75□□□□□ -2.13
VRK1-202ENST00000553683 ARHGAP19Q14CB8 494 aa1.75□□□□□ -2.13
VRK1-202ENST00000553683 STK38Q15208 465 aa1.75□□□□□ -2.13
VRK1-202ENST00000553683 SNCBQ16143 134 aa1.75□□□□□ -2.13
VRK1-202ENST00000553683 RGS21Q2M5E4 152 aa1.75□□□□□ -2.13
VRK1-202ENST00000553683 HSP90AA5PQ58FG0 334 aa1.75□□□□□ -2.13
VRK1-202ENST00000553683 KPRPQ5T749 579 aaPredicted RBP1.75□□□□□ -2.13
VRK1-202ENST00000553683 OR2G6Q5TZ20 316 aa1.75□□□□□ -2.13
VRK1-202ENST00000553683 PPP1R2P3Q6NXS1 205 aa1.75□□□□□ -2.13
VRK1-202ENST00000553683 METAP1DQ6UB28 335 aaPredicted RBP1.75□□□□□ -2.13
VRK1-202ENST00000553683 ISLR2Q6UXK2 745 aa1.75□□□□□ -2.13
VRK1-202ENST00000553683 Q6ZN92 141 aa1.75□□□□□ -2.13
VRK1-202ENST00000553683 NLRP9Q7RTR0 991 aa1.75□□□□□ -2.13
VRK1-202ENST00000553683 BHLHA15Q7RTS1 189 aaPredicted RBP1.75□□□□□ -2.13
VRK1-202ENST00000553683 SLC26A11Q86WA9 606 aa1.75□□□□□ -2.13
VRK1-202ENST00000553683 ITPRIPQ8IWB1 547 aa1.75□□□□□ -2.13
VRK1-202ENST00000553683 UBALD2Q8IYN6 164 aa1.75□□□□□ -2.13
VRK1-202ENST00000553683 LRRC34Q8IZ02 419 aa1.75□□□□□ -2.13
VRK1-202ENST00000553683 ZNF615Q8N8J6 731 aa1.75□□□□□ -2.13
VRK1-202ENST00000553683 VN1R2Q8NFZ6 395 aa1.75□□□□□ -2.13
VRK1-202ENST00000553683 OR1F12Q8NHA8 337 aa1.75□□□□□ -2.13
VRK1-202ENST00000553683 ENKURQ8TC29 256 aa1.75□□□□□ -2.13
VRK1-202ENST00000553683 NT5C3BQ969T7 300 aa1.75□□□□□ -2.13
VRK1-202ENST00000553683 OPTNQ96CV9 577 aa1.75□□□□□ -2.13
VRK1-202ENST00000553683 IFT74Q96LB3 600 aa1.75□□□□□ -2.13
VRK1-202ENST00000553683 LINC00477Q96M19 166 aa1.75□□□□□ -2.13
VRK1-202ENST00000553683 RPRD1AQ96P16 312 aaPredicted RBP1.75□□□□□ -2.13
VRK1-202ENST00000553683 MRPL45Q9BRJ2 306 aaKnown RBP1.75□□□□□ -2.13
VRK1-202ENST00000553683 NAT9Q9BTE0 207 aa1.75□□□□□ -2.13
VRK1-202ENST00000553683 TRIM62Q9BVG3 475 aa1.75□□□□□ -2.13
VRK1-202ENST00000553683 PARD6BQ9BYG5 372 aa1.75□□□□□ -2.13
VRK1-202ENST00000553683 FRMD8P1Q9BZ68 369 aaPredicted RBP1.75□□□□□ -2.13
VRK1-202ENST00000553683 TRIM4Q9C037 500 aa1.75□□□□□ -2.13
VRK1-202ENST00000553683 AZI2Q9H6S1 392 aa1.75□□□□□ -2.13
VRK1-202ENST00000553683 SYNDIG1Q9H7V2 258 aa1.75□□□□□ -2.13
VRK1-202ENST00000553683 FARSBQ9NSD9 589 aaKnown RBP1.75□□□□□ -2.13
VRK1-202ENST00000553683 PAQR5Q9NXK6 330 aaPredicted RBP1.75□□□□□ -2.13
VRK1-202ENST00000553683 KCNIP1Q9NZI2 227 aa1.75□□□□□ -2.13
VRK1-202ENST00000553683 PCYOX1Q9UHG3 505 aa1.75□□□□□ -2.13
VRK1-202ENST00000553683 PPIL1Q9Y3C6 166 aa1.75□□□□□ -2.13
VRK1-202ENST00000553683 YTHDF2Q9Y5A9 579 aaKnown RBP1.75□□□□□ -2.13
VRK1-202ENST00000553683 BZW2Q9Y6E2 419 aaKnown RBP1.75□□□□□ -2.13
VRK1-202ENST00000553683 COMMD3-BMI1R4GMX3 469 aa1.75□□□□□ -2.13
VRK1-202ENST00000553683 CUL9Q8IWT3 2517 aa1.75□□□□□ -2.13
VRK1-202ENST00000553683 MRC2Q9UBG0 1479 aa1.75□□□□□ -2.13
VRK1-202ENST00000553683 BAZ1BQ9UIG0 1483 aaKnown RBP1.75□□□□□ -2.13
VRK1-202ENST00000553683 CHD1O14646 1710 aa1.74□□□□□ -2.13
VRK1-202ENST00000553683 PLEKHG2Q9H7P9 1386 aa1.74□□□□□ -2.13
VRK1-202ENST00000553683 UTRNP46939 3433 aa1.74□□□□□ -2.13
VRK1-202ENST00000553683 A0A0G2JLM5 398 aa1.74□□□□□ -2.13
VRK1-202ENST00000553683 KIR2DL5BA0A0G2JN68 375 aa1.74□□□□□ -2.13
VRK1-202ENST00000553683 KIR2DL5BA0A0G2JPC4 375 aa1.74□□□□□ -2.13
VRK1-202ENST00000553683 C12orf77C9JDV5 145 aa1.74□□□□□ -2.13
VRK1-202ENST00000553683 H0YCG3 227 aa1.74□□□□□ -2.13
VRK1-202ENST00000553683 H3BNH8 94 aa1.74□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms