RNA–Protein interactions for RNA: ENST00000553599.5

PSEN1-207, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 591 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-207ENST00000553599 ZNF627Q7L945 461 aa17.03■□□□□ 0.32
PSEN1-207ENST00000553599 ZBTB46Q86UZ6 589 aa17.03■□□□□ 0.32
PSEN1-207ENST00000553599 OR8J1Q8NGP2 316 aa17.03■□□□□ 0.32
PSEN1-207ENST00000553599 OR2T4Q8NH00 348 aa17.03■□□□□ 0.32
PSEN1-207ENST00000553599 RNASE6Q93091 150 aaKnown RBP17.03■□□□□ 0.32
PSEN1-207ENST00000553599 APOL4Q9BPW4 351 aa17.03■□□□□ 0.32
PSEN1-207ENST00000553599 ADI1Q9BV57 179 aa17.03■□□□□ 0.32
PSEN1-207ENST00000553599 NMNAT2Q9BZQ4 307 aa17.03■□□□□ 0.32
PSEN1-207ENST00000553599 RACGAP1Q9H0H5 632 aa17.03■□□□□ 0.32
PSEN1-207ENST00000553599 OR10A4Q9H209 315 aa17.03■□□□□ 0.32
PSEN1-207ENST00000553599 IMPAD1Q9NX62 359 aa17.03■□□□□ 0.32
PSEN1-207ENST00000553599 GPR52Q9Y2T5 361 aa17.03■□□□□ 0.32
PSEN1-207ENST00000553599 FREM1Q5H8C1 2179 aa17.02■□□□□ 0.32
PSEN1-207ENST00000553599 FLNCQ14315 2725 aa17.02■□□□□ 0.32
PSEN1-207ENST00000553599 FAM90A27PA6NNH2 459 aa17.02■□□□□ 0.32
PSEN1-207ENST00000553599 PRR23D1E9PI22 279 aaPredicted RBP17.02■□□□□ 0.32
PSEN1-207ENST00000553599 MPZL2O60487 215 aa17.02■□□□□ 0.32
PSEN1-207ENST00000553599 SLC16A7O60669 478 aa17.02■□□□□ 0.32
PSEN1-207ENST00000553599 SLC2A10O95528 541 aa17.02■□□□□ 0.32
PSEN1-207ENST00000553599 ITGA5P08648 1049 aa17.02■□□□□ 0.32
PSEN1-207ENST00000553599 PRR23D2P0DMB1 279 aaPredicted RBP17.02■□□□□ 0.32
PSEN1-207ENST00000553599 IGHV1-2P23083 117 aa17.02■□□□□ 0.32
PSEN1-207ENST00000553599 CAPGP40121 348 aa17.02■□□□□ 0.32
PSEN1-207ENST00000553599 GUCA1AP43080 201 aaPredicted RBP17.02■□□□□ 0.32
PSEN1-207ENST00000553599 ADARB1P78563 741 aaKnown RBP17.02■□□□□ 0.32
PSEN1-207ENST00000553599 CEACAM16Q2WEN9 425 aa17.02■□□□□ 0.32
PSEN1-207ENST00000553599 SFRP5Q5T4F7 317 aa17.02■□□□□ 0.32
PSEN1-207ENST00000553599 LINGO2Q7L985 606 aa17.02■□□□□ 0.32
PSEN1-207ENST00000553599 ZNF433Q8N7K0 673 aaPredicted RBP17.02■□□□□ 0.32
PSEN1-207ENST00000553599 FAM81AQ8TBF8 368 aa17.02■□□□□ 0.32
PSEN1-207ENST00000553599 TMEM163Q8TC26 289 aa17.02■□□□□ 0.32
PSEN1-207ENST00000553599 SSC4DQ8WTU2 575 aa17.02■□□□□ 0.32
PSEN1-207ENST00000553599 NUAK2Q9H093 628 aa17.02■□□□□ 0.32
PSEN1-207ENST00000553599 RPRD1BQ9NQG5 326 aaKnown RBP17.02■□□□□ 0.32
PSEN1-207ENST00000553599 HOXB1P14653 301 aaPredicted RBP17.01■□□□□ 0.31
PSEN1-207ENST00000553599 CTLA4P16410 223 aa17.01■□□□□ 0.31
PSEN1-207ENST00000553599 NPR2P20594 1047 aa17.01■□□□□ 0.31
PSEN1-207ENST00000553599 PEX19P40855 299 aa17.01■□□□□ 0.31
PSEN1-207ENST00000553599 BLVRAP53004 296 aa17.01■□□□□ 0.31
PSEN1-207ENST00000553599 AQP4P55087 323 aa17.01■□□□□ 0.31
PSEN1-207ENST00000553599 FMODQ06828 376 aa17.01■□□□□ 0.31
PSEN1-207ENST00000553599 SLC25A30Q5SVS4 291 aa17.01■□□□□ 0.31
PSEN1-207ENST00000553599 ANKRD16Q6P6B7 361 aa17.01■□□□□ 0.31
PSEN1-207ENST00000553599 IZUMO2Q6UXV1 221 aa17.01■□□□□ 0.31
PSEN1-207ENST00000553599 SSX8Q7RTT4 187 aa17.01■□□□□ 0.31
PSEN1-207ENST00000553599 CXorf67Q86X51 503 aaPredicted RBP17.01■□□□□ 0.31
PSEN1-207ENST00000553599 C17orf78Q8N4C9 275 aa17.01■□□□□ 0.31
PSEN1-207ENST00000553599 CYB561A3Q8NBI2 242 aa17.01■□□□□ 0.31
PSEN1-207ENST00000553599 SETD9Q8NE22 299 aa17.01■□□□□ 0.31
PSEN1-207ENST00000553599 STEAP2Q8NFT2 490 aa17.01■□□□□ 0.31
PSEN1-207ENST00000553599 CYGBQ8WWM9 190 aa17.01■□□□□ 0.31
PSEN1-207ENST00000553599 TFAP2CQ92754 450 aa17.01■□□□□ 0.31
PSEN1-207ENST00000553599 KISS1RQ969F8 398 aaPredicted RBP17.01■□□□□ 0.31
PSEN1-207ENST00000553599 GALNT8Q9NY28 637 aa17.01■□□□□ 0.31
PSEN1-207ENST00000553599 B9D1Q9UPM9 204 aa17.01■□□□□ 0.31
PSEN1-207ENST00000553599 MOKQ9UQ07 419 aa17.01■□□□□ 0.31
PSEN1-207ENST00000553599 HSPE1-MOB4S4R3N1 261 aa17.01■□□□□ 0.31
PSEN1-207ENST00000553599 IGLV1-36A0A0B4J1U3 117 aa17■□□□□ 0.31
PSEN1-207ENST00000553599 C16orf97H3BN30 126 aa17■□□□□ 0.31
PSEN1-207ENST00000553599 PRODHO43272 600 aa17■□□□□ 0.31
PSEN1-207ENST00000553599 TLX2O43763 284 aaPredicted RBP17■□□□□ 0.31
PSEN1-207ENST00000553599 PRKYO43930 277 aa17■□□□□ 0.31
PSEN1-207ENST00000553599 SNRPGP62308 76 aaKnown RBP17■□□□□ 0.31
PSEN1-207ENST00000553599 MRPS34P82930 218 aaKnown RBP17■□□□□ 0.31
PSEN1-207ENST00000553599 SORDQ00796 357 aa17■□□□□ 0.31
PSEN1-207ENST00000553599 GLO1Q04760 184 aa17■□□□□ 0.31
PSEN1-207ENST00000553599 SRSF1Q07955 248 aaKnown RBP eCLIP17■□□□□ 0.31
PSEN1-207ENST00000553599 STAC2Q6ZMT1 411 aa17■□□□□ 0.31
PSEN1-207ENST00000553599 FOXL2NBQ6ZUU3 175 aa17■□□□□ 0.31
PSEN1-207ENST00000553599 CXXC5Q7LFL8 322 aaKnown RBP17■□□□□ 0.31
PSEN1-207ENST00000553599 P2RY8Q86VZ1 359 aa17■□□□□ 0.31
PSEN1-207ENST00000553599 CPOQ8IVL8 374 aa17■□□□□ 0.31
PSEN1-207ENST00000553599 GLB1L2Q8IW92 636 aa17■□□□□ 0.31
PSEN1-207ENST00000553599 CCDC36Q8IYA8 594 aa17■□□□□ 0.31
PSEN1-207ENST00000553599 OR6V1Q8N148 313 aa17■□□□□ 0.31
PSEN1-207ENST00000553599 TCEANCQ8N8B7 351 aa17■□□□□ 0.31
PSEN1-207ENST00000553599 PTP4A1Q93096 173 aa17■□□□□ 0.31
PSEN1-207ENST00000553599 FOXB1Q99853 325 aa17■□□□□ 0.31
PSEN1-207ENST00000553599 SRA1Q9HD15 236 aaKnown RBP17■□□□□ 0.31
PSEN1-207ENST00000553599 CIB4A0PJX0 185 aa16.99■□□□□ 0.31
PSEN1-207ENST00000553599 NKX2-6A6NCS4 301 aa16.99■□□□□ 0.31
PSEN1-207ENST00000553599 PPP3CBP16298 524 aa16.99■□□□□ 0.31
PSEN1-207ENST00000553599 SPI1P17947 270 aa16.99■□□□□ 0.31
PSEN1-207ENST00000553599 PAX7P23759 505 aa16.99■□□□□ 0.31
PSEN1-207ENST00000553599 IL32P24001 234 aa16.99■□□□□ 0.31
PSEN1-207ENST00000553599 ARF1P84077 181 aaKnown RBP16.99■□□□□ 0.31
PSEN1-207ENST00000553599 TFF3Q07654 80 aa16.99■□□□□ 0.31
PSEN1-207ENST00000553599 CDSNQ15517 529 aa16.99■□□□□ 0.31
PSEN1-207ENST00000553599 SLC35D3Q5M8T2 416 aa16.99■□□□□ 0.31
PSEN1-207ENST00000553599 MEDAGQ5VYS4 303 aa16.99■□□□□ 0.31
PSEN1-207ENST00000553599 NXNL2Q5VZ03 156 aa16.99■□□□□ 0.31
PSEN1-207ENST00000553599 PLBD1Q6P4A8 553 aa16.99■□□□□ 0.31
PSEN1-207ENST00000553599 BHLHA15Q7RTS1 189 aaPredicted RBP16.99■□□□□ 0.31
PSEN1-207ENST00000553599 OR1K1Q8NGR3 316 aa16.99■□□□□ 0.31
PSEN1-207ENST00000553599 NSMAFQ92636 917 aa16.99■□□□□ 0.31
PSEN1-207ENST00000553599 ZNF837Q96EG3 531 aaPredicted RBP16.99■□□□□ 0.31
PSEN1-207ENST00000553599 MUS81Q96NY9 551 aa16.99■□□□□ 0.31
PSEN1-207ENST00000553599 SIAEQ9HAT2 523 aa16.99■□□□□ 0.31
PSEN1-207ENST00000553599 HINT3Q9NQE9 182 aaKnown RBP16.99■□□□□ 0.31
PSEN1-207ENST00000553599 TMEM38BQ9NVV0 291 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms