RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 MPP2Q14168 576 aa12.05□□□□□ -0.48
CHMP1A-210ENST00000551981 NRN1LQ496H8 165 aa12.05□□□□□ -0.48
CHMP1A-210ENST00000551981 CEP85LQ5SZL2 805 aa12.05□□□□□ -0.48
CHMP1A-210ENST00000551981 LRFN4Q6PJG9 635 aa12.05□□□□□ -0.48
CHMP1A-210ENST00000551981 SLC2A7Q6PXP3 512 aa12.05□□□□□ -0.48
CHMP1A-210ENST00000551981 UNQ6126/PRO20091Q6UXV3 157 aa12.05□□□□□ -0.48
CHMP1A-210ENST00000551981 ZNF771Q7L3S4 317 aaPredicted RBP12.05□□□□□ -0.48
CHMP1A-210ENST00000551981 RBM15BQ8NDT2 890 aaKnown RBP12.05□□□□□ -0.48
CHMP1A-210ENST00000551981 OR9I1Q8NGQ6 314 aa12.05□□□□□ -0.48
CHMP1A-210ENST00000551981 OR1J1Q8NGS3 322 aa12.05□□□□□ -0.48
CHMP1A-210ENST00000551981 DVL3Q92997 716 aaPredicted RBP12.05□□□□□ -0.48
CHMP1A-210ENST00000551981 POP5Q969H6 163 aaKnown RBP12.05□□□□□ -0.48
CHMP1A-210ENST00000551981 SLC25A44Q96H78 314 aaPredicted RBP12.05□□□□□ -0.48
CHMP1A-210ENST00000551981 MAELQ96JY0 434 aaKnown RBP12.05□□□□□ -0.48
CHMP1A-210ENST00000551981 RSPO3Q9BXY4 272 aaPredicted RBP12.05□□□□□ -0.48
CHMP1A-210ENST00000551981 CENPHQ9H3R5 247 aa12.05□□□□□ -0.48
CHMP1A-210ENST00000551981 UBAP1Q9NZ09 502 aa12.05□□□□□ -0.48
CHMP1A-210ENST00000551981 CACNG2Q9Y698 323 aa12.05□□□□□ -0.48
CHMP1A-210ENST00000551981 VWFP04275 2813 aa12.05□□□□□ -0.48
CHMP1A-210ENST00000551981 ARHGAP32A7KAX9 2087 aa12.04□□□□□ -0.48
CHMP1A-210ENST00000551981 RNF13O43567 381 aa12.04□□□□□ -0.48
CHMP1A-210ENST00000551981 MFN2O95140 757 aa12.04□□□□□ -0.48
CHMP1A-210ENST00000551981 IGHG1P01857 330 aa12.04□□□□□ -0.48
CHMP1A-210ENST00000551981 QDPRP09417 244 aa12.04□□□□□ -0.48
CHMP1A-210ENST00000551981 MAKP20794 623 aa12.04□□□□□ -0.48
CHMP1A-210ENST00000551981 PPIBP23284 216 aaKnown RBP12.04□□□□□ -0.48
CHMP1A-210ENST00000551981 GCH1P30793 250 aa12.04□□□□□ -0.48
CHMP1A-210ENST00000551981 ZNF84P51523 738 aa12.04□□□□□ -0.48
CHMP1A-210ENST00000551981 HSF2Q03933 536 aa12.04□□□□□ -0.48
CHMP1A-210ENST00000551981 ZNF613Q6PF04 617 aa12.04□□□□□ -0.48
CHMP1A-210ENST00000551981 DOK3Q7L591 496 aa12.04□□□□□ -0.48
CHMP1A-210ENST00000551981 ARMC8Q8IUR7 673 aa12.04□□□□□ -0.48
CHMP1A-210ENST00000551981 LRRC17Q8N6Y2 441 aa12.04□□□□□ -0.48
CHMP1A-210ENST00000551981 GTF3AQ92664 365 aaKnown RBP12.04□□□□□ -0.48
CHMP1A-210ENST00000551981 TRIM44Q96DX7 344 aaPredicted RBP12.04□□□□□ -0.48
CHMP1A-210ENST00000551981 KCNN2Q9H2S1 579 aa12.04□□□□□ -0.48
CHMP1A-210ENST00000551981 UNKLQ9H9P5 680 aaKnown RBP12.04□□□□□ -0.48
CHMP1A-210ENST00000551981 CYSLTR2Q9NS75 346 aa12.04□□□□□ -0.48
CHMP1A-210ENST00000551981 NUP50Q9UKX7 468 aa12.04□□□□□ -0.48
CHMP1A-210ENST00000551981 CMYA5Q8N3K9 4069 aa12.03□□□□□ -0.48
CHMP1A-210ENST00000551981 TANC2Q9HCD6 1990 aa12.03□□□□□ -0.48
CHMP1A-210ENST00000551981 DNAJC9-AS1A6NH13 148 aa12.03□□□□□ -0.48
CHMP1A-210ENST00000551981 POM121CA8CG34 1229 aa12.03□□□□□ -0.48
CHMP1A-210ENST00000551981 SPRY3O43610 288 aa12.03□□□□□ -0.48
CHMP1A-210ENST00000551981 CHP2O43745 196 aa12.03□□□□□ -0.48
CHMP1A-210ENST00000551981 MGRN1O60291 552 aa12.03□□□□□ -0.48
CHMP1A-210ENST00000551981 ZNF500O60304 480 aaPredicted RBP12.03□□□□□ -0.48
CHMP1A-210ENST00000551981 FMO6PO60774 539 aa12.03□□□□□ -0.48
CHMP1A-210ENST00000551981 SNNO75324 88 aaPredicted RBP12.03□□□□□ -0.48
CHMP1A-210ENST00000551981 IGHV1-46P01743 117 aa12.03□□□□□ -0.48
CHMP1A-210ENST00000551981 HIST1H2ABP04908 130 aa12.03□□□□□ -0.48
CHMP1A-210ENST00000551981 PGA4P0DJD7 388 aa12.03□□□□□ -0.48
CHMP1A-210ENST00000551981 PGA3P0DJD8 388 aa12.03□□□□□ -0.48
CHMP1A-210ENST00000551981 SLC6A2P23975 617 aa12.03□□□□□ -0.48
CHMP1A-210ENST00000551981 CLRN1P58418 232 aa12.03□□□□□ -0.48
CHMP1A-210ENST00000551981 IL13RA1P78552 427 aa12.03□□□□□ -0.48
CHMP1A-210ENST00000551981 BAMBIQ13145 260 aa12.03□□□□□ -0.48
CHMP1A-210ENST00000551981 SCARB2Q14108 478 aa12.03□□□□□ -0.48
CHMP1A-210ENST00000551981 MELKQ14680 651 aa12.03□□□□□ -0.48
CHMP1A-210ENST00000551981 ZNF718Q3SXZ3 478 aa12.03□□□□□ -0.48
CHMP1A-210ENST00000551981 HIST3H2AQ7L7L0 130 aa12.03□□□□□ -0.48
CHMP1A-210ENST00000551981 HIST1H2ACQ93077 130 aa12.03□□□□□ -0.48
CHMP1A-210ENST00000551981 SLC25A28Q96A46 364 aa12.03□□□□□ -0.48
CHMP1A-210ENST00000551981 LRRC58Q96CX6 371 aa12.03□□□□□ -0.48
CHMP1A-210ENST00000551981 NANSQ9NR45 359 aa12.03□□□□□ -0.48
CHMP1A-210ENST00000551981 TAS2R5Q9NYW4 299 aa12.03□□□□□ -0.48
CHMP1A-210ENST00000551981 EIF3KQ9UBQ5 218 aaKnown RBP12.03□□□□□ -0.48
CHMP1A-210ENST00000551981 CORO2BQ9UQ03 480 aa12.03□□□□□ -0.48
CHMP1A-210ENST00000551981 TPST2O60704 377 aa12.02□□□□□ -0.49
CHMP1A-210ENST00000551981 UBOX5O94941 541 aa12.02□□□□□ -0.49
CHMP1A-210ENST00000551981 CH25HO95992 272 aa12.02□□□□□ -0.49
CHMP1A-210ENST00000551981 VIMP08670 466 aaKnown RBP12.02□□□□□ -0.49
CHMP1A-210ENST00000551981 HOXB9P17482 250 aaPredicted RBP12.02□□□□□ -0.49
CHMP1A-210ENST00000551981 CCNOP22674 350 aa12.02□□□□□ -0.49
CHMP1A-210ENST00000551981 AQP1P29972 269 aa12.02□□□□□ -0.49
CHMP1A-210ENST00000551981 LIPAP38571 399 aa12.02□□□□□ -0.49
CHMP1A-210ENST00000551981 STX1BP61266 288 aa12.02□□□□□ -0.49
CHMP1A-210ENST00000551981 ZNF74Q16587 644 aa12.02□□□□□ -0.49
CHMP1A-210ENST00000551981 ZMAT1Q5H9K5 638 aa12.02□□□□□ -0.49
CHMP1A-210ENST00000551981 LRIF1Q5T3J3 769 aa12.02□□□□□ -0.49
CHMP1A-210ENST00000551981 TTC33Q6PID6 262 aaPredicted RBP12.02□□□□□ -0.49
CHMP1A-210ENST00000551981 LINC00114Q6XXX2 140 aa12.02□□□□□ -0.49
CHMP1A-210ENST00000551981 HDDC2Q7Z4H3 204 aa12.02□□□□□ -0.49
CHMP1A-210ENST00000551981 MREGQ8N565 214 aa12.02□□□□□ -0.49
CHMP1A-210ENST00000551981 ANKRD42Q8N9B4 389 aa12.02□□□□□ -0.49
CHMP1A-210ENST00000551981 DUX5Q96PT3 197 aa12.02□□□□□ -0.49
CHMP1A-210ENST00000551981 DIRC2Q96SL1 478 aa12.02□□□□□ -0.49
CHMP1A-210ENST00000551981 MCHR1Q99705 422 aa12.02□□□□□ -0.49
CHMP1A-210ENST00000551981 TMEM38AQ9H6F2 299 aa12.02□□□□□ -0.49
CHMP1A-210ENST00000551981 SLCO1B3Q9NPD5 702 aa12.02□□□□□ -0.49
CHMP1A-210ENST00000551981 PLEK2Q9NYT0 353 aa12.02□□□□□ -0.49
CHMP1A-210ENST00000551981 SLC25A37Q9NYZ2 338 aa12.02□□□□□ -0.49
CHMP1A-210ENST00000551981 CGGBP1Q9UFW8 167 aaPredicted RBP12.02□□□□□ -0.49
CHMP1A-210ENST00000551981 PURGQ9UJV8 347 aaKnown RBP12.02□□□□□ -0.49
CHMP1A-210ENST00000551981 ZNF229Q9UJW7 825 aa12.02□□□□□ -0.49
CHMP1A-210ENST00000551981 TRIM33Q9UPN9 1127 aa12.02□□□□□ -0.49
CHMP1A-210ENST00000551981 AUP1Q9Y679 476 aa12.02□□□□□ -0.49
CHMP1A-210ENST00000551981 NOTCH1P46531 2555 aa12.01□□□□□ -0.49
CHMP1A-210ENST00000551981 IGHMP01871 453 aa12.01□□□□□ -0.49
CHMP1A-210ENST00000551981 RNASE1P07998 156 aaKnown RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms