RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 FAM192AQ9GZU8 254 aa4.18□□□□□ -1.74
CPSF6-206ENST00000550987 CWH43Q9H720 699 aa4.18□□□□□ -1.74
CPSF6-206ENST00000550987 ASCL3Q9NQ33 180 aa4.18□□□□□ -1.74
CPSF6-206ENST00000550987 PXMP2Q9NR77 195 aa4.18□□□□□ -1.74
CPSF6-206ENST00000550987 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.18□□□□□ -1.74
CPSF6-206ENST00000550987 PAK1IP1Q9NWT1 392 aaPredicted RBP4.18□□□□□ -1.74
CPSF6-206ENST00000550987 PRPF19Q9UMS4 504 aaKnown RBP4.18□□□□□ -1.74
CPSF6-206ENST00000550987 NPTNQ9Y639 398 aa4.18□□□□□ -1.74
CPSF6-206ENST00000550987 CEP192Q8TEP8 1941 aa4.17□□□□□ -1.74
CPSF6-206ENST00000550987 TRAV9-2A0A087WT02 112 aa4.17□□□□□ -1.74
CPSF6-206ENST00000550987 A0A0U1RQS6 177 aa4.17□□□□□ -1.74
CPSF6-206ENST00000550987 RBMY1BA6NDE4 496 aaKnown RBP4.17□□□□□ -1.74
CPSF6-206ENST00000550987 RBMY1EA6NEQ0 496 aaKnown RBP4.17□□□□□ -1.74
CPSF6-206ENST00000550987 SNTNA6NMZ2 147 aa4.17□□□□□ -1.74
CPSF6-206ENST00000550987 FOXE1O00358 373 aaPredicted RBP4.17□□□□□ -1.74
CPSF6-206ENST00000550987 SAP18O00422 153 aaKnown RBP4.17□□□□□ -1.74
CPSF6-206ENST00000550987 RGS16O15492 202 aaPredicted RBP4.17□□□□□ -1.74
CPSF6-206ENST00000550987 YKT6O15498 198 aa4.17□□□□□ -1.74
CPSF6-206ENST00000550987 CD55P08174 381 aa4.17□□□□□ -1.74
CPSF6-206ENST00000550987 RBMY1DP0C7P1 496 aaKnown RBP4.17□□□□□ -1.74
CPSF6-206ENST00000550987 CT45A10P0DMU9 189 aa4.17□□□□□ -1.74
CPSF6-206ENST00000550987 HSPD1P10809 573 aaKnown RBP4.17□□□□□ -1.74
CPSF6-206ENST00000550987 IGFBP5P24593 272 aa4.17□□□□□ -1.74
CPSF6-206ENST00000550987 YWHABP31946 246 aaKnown RBP4.17□□□□□ -1.74
CPSF6-206ENST00000550987 NUP62P37198 522 aaPredicted RBP4.17□□□□□ -1.74
CPSF6-206ENST00000550987 ELK3P41970 407 aa4.17□□□□□ -1.74
CPSF6-206ENST00000550987 IST1P53990 364 aa4.17□□□□□ -1.74
CPSF6-206ENST00000550987 SLC8A3P57103 927 aa4.17□□□□□ -1.74
CPSF6-206ENST00000550987 CARD18P57730 90 aa4.17□□□□□ -1.74
CPSF6-206ENST00000550987 MRPS15P82914 257 aaKnown RBP4.17□□□□□ -1.74
CPSF6-206ENST00000550987 DNAJC3Q13217 504 aa4.17□□□□□ -1.74
CPSF6-206ENST00000550987 SERTAD2Q14140 314 aa4.17□□□□□ -1.74
CPSF6-206ENST00000550987 ARHGAP19Q14CB8 494 aa4.17□□□□□ -1.74
CPSF6-206ENST00000550987 SLC22A6Q4U2R8 563 aa4.17□□□□□ -1.74
CPSF6-206ENST00000550987 FAM120AOSQ5T036 256 aa4.17□□□□□ -1.74
CPSF6-206ENST00000550987 PDPK2PQ6A1A2 396 aa4.17□□□□□ -1.74
CPSF6-206ENST00000550987 OR2A2Q6IF42 318 aa4.17□□□□□ -1.74
CPSF6-206ENST00000550987 C6orf89Q6UWU4 347 aa4.17□□□□□ -1.74
CPSF6-206ENST00000550987 STXBP4Q6ZWJ1 553 aa4.17□□□□□ -1.74
CPSF6-206ENST00000550987 ITPRIPQ8IWB1 547 aa4.17□□□□□ -1.74
CPSF6-206ENST00000550987 MFSD9Q8NBP5 474 aa4.17□□□□□ -1.74
CPSF6-206ENST00000550987 SLC2A14Q8TDB8 520 aa4.17□□□□□ -1.74
CPSF6-206ENST00000550987 TIMD4Q96H15 378 aa4.17□□□□□ -1.74
CPSF6-206ENST00000550987 OR5M11Q96RB7 305 aa4.17□□□□□ -1.74
CPSF6-206ENST00000550987 FOXC2Q99958 501 aa4.17□□□□□ -1.74
CPSF6-206ENST00000550987 SPATA7Q9P0W8 599 aa4.17□□□□□ -1.74
CPSF6-206ENST00000550987 DHRS4-AS1Q9P1J3 65 aa4.17□□□□□ -1.74
CPSF6-206ENST00000550987 SAMD4AQ9UPU9 718 aaKnown RBP4.17□□□□□ -1.74
CPSF6-206ENST00000550987 POLDIP2Q9Y2S7 368 aa4.17□□□□□ -1.74
CPSF6-206ENST00000550987 AK6Q9Y3D8 172 aaKnown RBP4.17□□□□□ -1.74
CPSF6-206ENST00000550987 L3MBTL1Q9Y468 752 aa4.17□□□□□ -1.74
CPSF6-206ENST00000550987 CHD3Q12873 2000 aaKnown RBP4.17□□□□□ -1.74
CPSF6-206ENST00000550987 DOCK6Q96HP0 2047 aa4.17□□□□□ -1.74
CPSF6-206ENST00000550987 ABCB11O95342 1321 aa4.17□□□□□ -1.74
CPSF6-206ENST00000550987 MUC2Q02817 5179 aa4.17□□□□□ -1.74
CPSF6-206ENST00000550987 ZGRF1Q86YA3 2104 aa4.16□□□□□ -1.74
CPSF6-206ENST00000550987 OR6C74A6NCV1 312 aa4.16□□□□□ -1.74
CPSF6-206ENST00000550987 OR52A4PA6NMU1 304 aa4.16□□□□□ -1.74
CPSF6-206ENST00000550987 A8MX80 341 aa4.16□□□□□ -1.74
CPSF6-206ENST00000550987 PRR23D1E9PI22 279 aaPredicted RBP4.16□□□□□ -1.74
CPSF6-206ENST00000550987 NVLO15381 856 aaKnown RBP4.16□□□□□ -1.74
CPSF6-206ENST00000550987 TAPBPO15533 448 aa4.16□□□□□ -1.74
CPSF6-206ENST00000550987 PHF1O43189 567 aaPredicted RBP4.16□□□□□ -1.74
CPSF6-206ENST00000550987 ATP5LO75964 103 aa4.16□□□□□ -1.74
CPSF6-206ENST00000550987 DIRAS1O95057 198 aa4.16□□□□□ -1.74
CPSF6-206ENST00000550987 SLC2A10O95528 541 aa4.16□□□□□ -1.74
CPSF6-206ENST00000550987 TSPAN12O95859 305 aa4.16□□□□□ -1.74
CPSF6-206ENST00000550987 LY6G6DO95868 133 aa4.16□□□□□ -1.74
CPSF6-206ENST00000550987 RENP00797 406 aa4.16□□□□□ -1.74
CPSF6-206ENST00000550987 FGF4P08620 206 aa4.16□□□□□ -1.74
CPSF6-206ENST00000550987 PRR23D2P0DMB1 279 aaPredicted RBP4.16□□□□□ -1.74
CPSF6-206ENST00000550987 LAMP1P11279 417 aa4.16□□□□□ -1.74
CPSF6-206ENST00000550987 ANXA8P13928 327 aa4.16□□□□□ -1.74
CPSF6-206ENST00000550987 EFNB2P52799 333 aa4.16□□□□□ -1.74
CPSF6-206ENST00000550987 ATP1B3P54709 279 aa4.16□□□□□ -1.74
CPSF6-206ENST00000550987 SP4Q02446 784 aa4.16□□□□□ -1.74
CPSF6-206ENST00000550987 OC90Q02509 493 aaPredicted RBP4.16□□□□□ -1.74
CPSF6-206ENST00000550987 KLRB1Q12918 225 aa4.16□□□□□ -1.74
CPSF6-206ENST00000550987 HNRNPA0Q13151 305 aaKnown RBP4.16□□□□□ -1.74
CPSF6-206ENST00000550987 C1orf61Q13536 156 aa4.16□□□□□ -1.74
CPSF6-206ENST00000550987 DMRTC1Q5HYR2 192 aa4.16□□□□□ -1.74
CPSF6-206ENST00000550987 MARCH8Q5T0T0 291 aa4.16□□□□□ -1.74
CPSF6-206ENST00000550987 ANXA8L1Q5VT79 327 aa4.16□□□□□ -1.74
CPSF6-206ENST00000550987 WSCD1Q658N2 575 aa4.16□□□□□ -1.74
CPSF6-206ENST00000550987 PVRIGQ6DKI7 326 aa4.16□□□□□ -1.74
CPSF6-206ENST00000550987 ZNF343Q6P1L6 599 aa4.16□□□□□ -1.74
CPSF6-206ENST00000550987 ERICH5Q6P6B1 374 aa4.16□□□□□ -1.74
CPSF6-206ENST00000550987 CCDC137Q6PK04 289 aaKnown RBP4.16□□□□□ -1.74
CPSF6-206ENST00000550987 ZNF600Q6ZNG1 722 aa4.16□□□□□ -1.74
CPSF6-206ENST00000550987 GPRIN3Q6ZVF9 776 aa4.16□□□□□ -1.74
CPSF6-206ENST00000550987 SERPINA9Q86WD7 417 aa4.16□□□□□ -1.74
CPSF6-206ENST00000550987 FAM9CQ8IZT9 166 aa4.16□□□□□ -1.74
CPSF6-206ENST00000550987 Q8N377 158 aa4.16□□□□□ -1.74
CPSF6-206ENST00000550987 OR1L4Q8NGR5 311 aa4.16□□□□□ -1.74
CPSF6-206ENST00000550987 PEX13Q92968 403 aa4.16□□□□□ -1.74
CPSF6-206ENST00000550987 TOMM40LQ969M1 308 aa4.16□□□□□ -1.74
CPSF6-206ENST00000550987 RASD2Q96D21 266 aa4.16□□□□□ -1.74
CPSF6-206ENST00000550987 IFT74Q96LB3 600 aa4.16□□□□□ -1.74
CPSF6-206ENST00000550987 ZNF599Q96NL3 588 aa4.16□□□□□ -1.74
CPSF6-206ENST00000550987 CLCC1Q96S66 551 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms