RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 A8MV72 311 aaPredicted RBP11.7□□□□□ -0.54
NUP188-211ENST00000550219 LY6HO94772 140 aa11.7□□□□□ -0.54
NUP188-211ENST00000550219 ALPLP05186 524 aa11.7□□□□□ -0.54
NUP188-211ENST00000550219 ZNF26P17031 533 aaPredicted RBP11.7□□□□□ -0.54
NUP188-211ENST00000550219 GSTM3P21266 225 aa11.7□□□□□ -0.54
NUP188-211ENST00000550219 PRPS1P60891 318 aa11.7□□□□□ -0.54
NUP188-211ENST00000550219 LGALS3BPQ08380 585 aa11.7□□□□□ -0.54
NUP188-211ENST00000550219 ZP4Q12836 540 aa11.7□□□□□ -0.54
NUP188-211ENST00000550219 TRIP10Q15642 601 aa11.7□□□□□ -0.54
NUP188-211ENST00000550219 ZNF544Q6NX49 715 aa11.7□□□□□ -0.54
NUP188-211ENST00000550219 H1FNTQ75WM6 255 aaPredicted RBP11.7□□□□□ -0.54
NUP188-211ENST00000550219 CBR4Q8N4T8 237 aa11.7□□□□□ -0.54
NUP188-211ENST00000550219 C10orf53Q8N6V4 93 aa11.7□□□□□ -0.54
NUP188-211ENST00000550219 ATG16L2Q8NAA4 619 aa11.7□□□□□ -0.54
NUP188-211ENST00000550219 OR5J2Q8NH18 312 aa11.7□□□□□ -0.54
NUP188-211ENST00000550219 EME1Q96AY2 570 aa11.7□□□□□ -0.54
NUP188-211ENST00000550219 TMEM45BQ96B21 275 aa11.7□□□□□ -0.54
NUP188-211ENST00000550219 SLC25A36Q96CQ1 311 aa11.7□□□□□ -0.54
NUP188-211ENST00000550219 FBXO17Q96EF6 278 aa11.7□□□□□ -0.54
NUP188-211ENST00000550219 SLC29A1Q99808 456 aa11.7□□□□□ -0.54
NUP188-211ENST00000550219 RBM4BQ9BQ04 359 aaKnown RBP11.7□□□□□ -0.54
NUP188-211ENST00000550219 RBM4Q9BWF3 364 aaKnown RBP11.7□□□□□ -0.54
NUP188-211ENST00000550219 SMURF2Q9HAU4 748 aa11.7□□□□□ -0.54
NUP188-211ENST00000550219 C8orf4Q9NR00 106 aa11.7□□□□□ -0.54
NUP188-211ENST00000550219 REV1Q9UBZ9 1251 aa11.7□□□□□ -0.54
NUP188-211ENST00000550219 TMEFF2Q9UIK5 374 aaPredicted RBP11.7□□□□□ -0.54
NUP188-211ENST00000550219 MOKQ9UQ07 419 aa11.7□□□□□ -0.54
NUP188-211ENST00000550219 SIGLEC7Q9Y286 467 aa11.7□□□□□ -0.54
NUP188-211ENST00000550219 HIF3AQ9Y2N7 669 aa11.7□□□□□ -0.54
NUP188-211ENST00000550219 CHD3Q12873 2000 aaKnown RBP11.7□□□□□ -0.54
NUP188-211ENST00000550219 DNHD1Q96M86 4753 aa11.7□□□□□ -0.54
NUP188-211ENST00000550219 CSPG4Q6UVK1 2322 aa11.69□□□□□ -0.54
NUP188-211ENST00000550219 LOC102725191A0A1B0GVB3 256 aa11.69□□□□□ -0.54
NUP188-211ENST00000550219 UNC119BA6NIH7 251 aa11.69□□□□□ -0.54
NUP188-211ENST00000550219 M0R082 166 aa11.69□□□□□ -0.54
NUP188-211ENST00000550219 PLPP3O14495 311 aa11.69□□□□□ -0.54
NUP188-211ENST00000550219 SOCS2O14508 198 aa11.69□□□□□ -0.54
NUP188-211ENST00000550219 WNT11O96014 354 aa11.69□□□□□ -0.54
NUP188-211ENST00000550219 HPRP00739 348 aa11.69□□□□□ -0.54
NUP188-211ENST00000550219 SAGP10523 405 aaPredicted RBP11.69□□□□□ -0.54
NUP188-211ENST00000550219 ZNF16P17020 682 aaPredicted RBP11.69□□□□□ -0.54
NUP188-211ENST00000550219 PEX2P28328 305 aa11.69□□□□□ -0.54
NUP188-211ENST00000550219 GTF2E2P29084 291 aaKnown RBP11.69□□□□□ -0.54
NUP188-211ENST00000550219 SELENOPP49908 381 aa11.69□□□□□ -0.54
NUP188-211ENST00000550219 ALDH3A2P51648 485 aa11.69□□□□□ -0.54
NUP188-211ENST00000550219 FXYD6P3P58550 94 aa11.69□□□□□ -0.54
NUP188-211ENST00000550219 TUBA1BP68363 451 aa11.69□□□□□ -0.54
NUP188-211ENST00000550219 TUBA4AP68366 448 aa11.69□□□□□ -0.54
NUP188-211ENST00000550219 DAG1Q14118 895 aa11.69□□□□□ -0.54
NUP188-211ENST00000550219 TMEM249Q2WGJ8 235 aa11.69□□□□□ -0.54
NUP188-211ENST00000550219 ZBED5Q49AG3 693 aa11.69□□□□□ -0.54
NUP188-211ENST00000550219 C6orf52Q5T4I8 152 aa11.69□□□□□ -0.54
NUP188-211ENST00000550219 LPCAT4Q643R3 524 aa11.69□□□□□ -0.54
NUP188-211ENST00000550219 TMEM225Q6GV28 225 aa11.69□□□□□ -0.54
NUP188-211ENST00000550219 NIPAL3Q6P499 406 aa11.69□□□□□ -0.54
NUP188-211ENST00000550219 NHLRC1Q6VVB1 395 aa11.69□□□□□ -0.54
NUP188-211ENST00000550219 ZBTB49Q6ZSB9 765 aa11.69□□□□□ -0.54
NUP188-211ENST00000550219 RASSF6Q6ZTQ3 369 aa11.69□□□□□ -0.54
NUP188-211ENST00000550219 TUBA1AQ71U36 451 aa11.69□□□□□ -0.54
NUP188-211ENST00000550219 ABHD12BQ7Z5M8 362 aaPredicted RBP11.69□□□□□ -0.54
NUP188-211ENST00000550219 OAFQ86UD1 273 aa11.69□□□□□ -0.54
NUP188-211ENST00000550219 PARP8Q8N3A8 854 aa11.69□□□□□ -0.54
NUP188-211ENST00000550219 PACRGLQ8N7B6 248 aa11.69□□□□□ -0.54
NUP188-211ENST00000550219 CLDN22Q8N7P3 220 aa11.69□□□□□ -0.54
NUP188-211ENST00000550219 POMGNT2Q8NAT1 580 aa11.69□□□□□ -0.54
NUP188-211ENST00000550219 OR13C2Q8NGS9 318 aa11.69□□□□□ -0.54
NUP188-211ENST00000550219 ZNF417Q8TAU3 575 aa11.69□□□□□ -0.54
NUP188-211ENST00000550219 NRG4Q8WWG1 115 aa11.69□□□□□ -0.54
NUP188-211ENST00000550219 FAM168AQ92567 244 aa11.69□□□□□ -0.54
NUP188-211ENST00000550219 TNFRSF13CQ96RJ3 184 aa11.69□□□□□ -0.54
NUP188-211ENST00000550219 ZNF587Q96SQ5 575 aaPredicted RBP11.69□□□□□ -0.54
NUP188-211ENST00000550219 KCNS3Q9BQ31 491 aa11.69□□□□□ -0.54
NUP188-211ENST00000550219 SF3B5Q9BWJ5 86 aaKnown RBP11.69□□□□□ -0.54
NUP188-211ENST00000550219 ASPNQ9BXN1 380 aa11.69□□□□□ -0.54
NUP188-211ENST00000550219 RASSF4Q9H2L5 321 aa11.69□□□□□ -0.54
NUP188-211ENST00000550219 ZNF556Q9HAH1 456 aa11.69□□□□□ -0.54
NUP188-211ENST00000550219 TAS2R5Q9NYW4 299 aa11.69□□□□□ -0.54
NUP188-211ENST00000550219 SEC14L4Q9UDX3 406 aa11.69□□□□□ -0.54
NUP188-211ENST00000550219 TLN2Q9Y4G6 2542 aa11.69□□□□□ -0.54
NUP188-211ENST00000550219 ZANQ9Y493 2812 aa11.68□□□□□ -0.54
NUP188-211ENST00000550219 A0A096LNT2 108 aa11.68□□□□□ -0.54
NUP188-211ENST00000550219 RNF212BA8MTL3 300 aa11.68□□□□□ -0.54
NUP188-211ENST00000550219 ZNF587BE7ETH6 402 aa11.68□□□□□ -0.54
NUP188-211ENST00000550219 MS4A18H0YCH9 400 aa11.68□□□□□ -0.54
NUP188-211ENST00000550219 H7C417 338 aa11.68□□□□□ -0.54
NUP188-211ENST00000550219 EI24O14681 340 aa11.68□□□□□ -0.54
NUP188-211ENST00000550219 HIST1H2ABP04908 130 aa11.68□□□□□ -0.54
NUP188-211ENST00000550219 BMP4P12644 408 aa11.68□□□□□ -0.54
NUP188-211ENST00000550219 SLC25A16P16260 332 aa11.68□□□□□ -0.54
NUP188-211ENST00000550219 DSCR9P59020 149 aa11.68□□□□□ -0.54
NUP188-211ENST00000550219 UBE2NP61088 152 aaKnown RBP11.68□□□□□ -0.54
NUP188-211ENST00000550219 PMS2P3Q13401 168 aa11.68□□□□□ -0.54
NUP188-211ENST00000550219 CARTPTQ16568 116 aa11.68□□□□□ -0.54
NUP188-211ENST00000550219 MS4A18Q3C1V0 323 aa11.68□□□□□ -0.54
NUP188-211ENST00000550219 TBRG1Q3YBR2 411 aa11.68□□□□□ -0.54
NUP188-211ENST00000550219 CHRFAM7AQ494W8 412 aa11.68□□□□□ -0.54
NUP188-211ENST00000550219 ZNF620Q6ZNG0 422 aa11.68□□□□□ -0.54
NUP188-211ENST00000550219 HIST3H2AQ7L7L0 130 aa11.68□□□□□ -0.54
NUP188-211ENST00000550219 ZIC4Q8N9L1 334 aa11.68□□□□□ -0.54
NUP188-211ENST00000550219 LRRC75AQ8NAA5 344 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms