RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 FHL1Q13642 323 aa14.94□□□□□ -0.02
CHMP1A-208ENST00000550102 CLEC12BQ2HXU8 276 aa14.94□□□□□ -0.02
CHMP1A-208ENST00000550102 VHLLQ6RSH7 139 aa14.94□□□□□ -0.02
CHMP1A-208ENST00000550102 SKA3Q8IX90 412 aa14.94□□□□□ -0.02
CHMP1A-208ENST00000550102 LRRC75AQ8NAA5 344 aa14.94□□□□□ -0.02
CHMP1A-208ENST00000550102 ZNF519Q8TB69 540 aa14.94□□□□□ -0.02
CHMP1A-208ENST00000550102 FNDC8Q8TC99 324 aa14.94□□□□□ -0.02
CHMP1A-208ENST00000550102 HDAC2Q92769 488 aaKnown RBP14.94□□□□□ -0.02
CHMP1A-208ENST00000550102 FBXO17Q96EF6 278 aa14.94□□□□□ -0.02
CHMP1A-208ENST00000550102 MS4A3Q96HJ5 214 aa14.94□□□□□ -0.02
CHMP1A-208ENST00000550102 TSPAN32Q96QS1 320 aa14.94□□□□□ -0.02
CHMP1A-208ENST00000550102 KCNK17Q96T54 332 aa14.94□□□□□ -0.02
CHMP1A-208ENST00000550102 ZNF442Q9H7R0 627 aa14.94□□□□□ -0.02
CHMP1A-208ENST00000550102 ADAM21Q9UKJ8 722 aa14.94□□□□□ -0.02
CHMP1A-208ENST00000550102 FAM171A2A8MVW0 826 aa14.93□□□□□ -0.02
CHMP1A-208ENST00000550102 SLC2A10O95528 541 aa14.93□□□□□ -0.02
CHMP1A-208ENST00000550102 FABP3P05413 133 aa14.93□□□□□ -0.02
CHMP1A-208ENST00000550102 RPL4P36578 427 aaKnown RBP14.93□□□□□ -0.02
CHMP1A-208ENST00000550102 ACVR1BP36896 505 aa14.93□□□□□ -0.02
CHMP1A-208ENST00000550102 SERPINF1P36955 418 aa14.93□□□□□ -0.02
CHMP1A-208ENST00000550102 LIMS1P48059 325 aa14.93□□□□□ -0.02
CHMP1A-208ENST00000550102 NUDT6P53370 316 aa14.93□□□□□ -0.02
CHMP1A-208ENST00000550102 HGFACQ04756 655 aa14.93□□□□□ -0.02
CHMP1A-208ENST00000550102 FMODQ06828 376 aa14.93□□□□□ -0.02
CHMP1A-208ENST00000550102 SNTB2Q13425 540 aaKnown RBP14.93□□□□□ -0.02
CHMP1A-208ENST00000550102 ADIPOQQ15848 244 aa14.93□□□□□ -0.02
CHMP1A-208ENST00000550102 SLC36A2Q495M3 483 aa14.93□□□□□ -0.02
CHMP1A-208ENST00000550102 ZBED5Q49AG3 693 aa14.93□□□□□ -0.02
CHMP1A-208ENST00000550102 MTX3Q5HYI7 312 aa14.93□□□□□ -0.02
CHMP1A-208ENST00000550102 TMEM53Q6P2H8 277 aa14.93□□□□□ -0.02
CHMP1A-208ENST00000550102 CIARTQ8N365 385 aaPredicted RBP14.93□□□□□ -0.02
CHMP1A-208ENST00000550102 HTRA1Q92743 480 aa14.93□□□□□ -0.02
CHMP1A-208ENST00000550102 NMD3Q96D46 503 aaKnown RBP14.93□□□□□ -0.02
CHMP1A-208ENST00000550102 ZNF75AQ96N20 296 aa14.93□□□□□ -0.02
CHMP1A-208ENST00000550102 TNFRSF13CQ96RJ3 184 aa14.93□□□□□ -0.02
CHMP1A-208ENST00000550102 SH3GL3Q99963 347 aa14.93□□□□□ -0.02
CHMP1A-208ENST00000550102 MUC13Q9H3R2 512 aa14.93□□□□□ -0.02
CHMP1A-208ENST00000550102 ACTR3BQ9P1U1 418 aa14.93□□□□□ -0.02
CHMP1A-208ENST00000550102 PMF1-BGLAPU3KQ54 211 aa14.93□□□□□ -0.02
CHMP1A-208ENST00000550102 CHD3Q12873 2000 aaKnown RBP14.93□□□□□ -0.02
CHMP1A-208ENST00000550102 MGRN1O60291 552 aa14.92□□□□□ -0.02
CHMP1A-208ENST00000550102 GADD45GO95257 159 aa14.92□□□□□ -0.02
CHMP1A-208ENST00000550102 OR4A8P0C604 315 aa14.92□□□□□ -0.02
CHMP1A-208ENST00000550102 ATP6V1B2P21281 511 aa14.92□□□□□ -0.02
CHMP1A-208ENST00000550102 MRPS34P82930 218 aaKnown RBP14.92□□□□□ -0.02
CHMP1A-208ENST00000550102 DAG1Q14118 895 aa14.92□□□□□ -0.02
CHMP1A-208ENST00000550102 RAB35Q15286 201 aa14.92□□□□□ -0.02
CHMP1A-208ENST00000550102 SEC23BQ15437 767 aa14.92□□□□□ -0.02
CHMP1A-208ENST00000550102 EFNB3Q15768 340 aa14.92□□□□□ -0.02
CHMP1A-208ENST00000550102 SWI5Q1ZZU3 235 aa14.92□□□□□ -0.02
CHMP1A-208ENST00000550102 IQCCQ4KMZ1 466 aa14.92□□□□□ -0.02
CHMP1A-208ENST00000550102 SLC16A14Q7RTX9 510 aa14.92□□□□□ -0.02
CHMP1A-208ENST00000550102 OR52J3Q8NH60 311 aa14.92□□□□□ -0.02
CHMP1A-208ENST00000550102 RSRC1Q96IZ7 334 aaKnown RBP14.92□□□□□ -0.02
CHMP1A-208ENST00000550102 FUZQ9BT04 418 aa14.92□□□□□ -0.02
CHMP1A-208ENST00000550102 ZNF346Q9UL40 294 aaKnown RBP14.92□□□□□ -0.02
CHMP1A-208ENST00000550102 PRPF19Q9UMS4 504 aaKnown RBP14.92□□□□□ -0.02
CHMP1A-208ENST00000550102 AURKCQ9UQB9 309 aa14.92□□□□□ -0.02
CHMP1A-208ENST00000550102 ADAM18Q9Y3Q7 739 aa14.92□□□□□ -0.02
CHMP1A-208ENST00000550102 SPEF1Q9Y4P9 236 aa14.92□□□□□ -0.02
CHMP1A-208ENST00000550102 UGT2A1Q9Y4X1 527 aa14.92□□□□□ -0.02
CHMP1A-208ENST00000550102 SH3PXD2BA1X283 911 aa14.91□□□□□ -0.02
CHMP1A-208ENST00000550102 VSTM5A8MXK1 200 aa14.91□□□□□ -0.02
CHMP1A-208ENST00000550102 B9A039 149 aa14.91□□□□□ -0.02
CHMP1A-208ENST00000550102 SMAD7O15105 426 aaKnown RBP14.91□□□□□ -0.02
CHMP1A-208ENST00000550102 NDUFB2O95178 105 aa14.91□□□□□ -0.02
CHMP1A-208ENST00000550102 SERPINA5P05154 406 aa14.91□□□□□ -0.02
CHMP1A-208ENST00000550102 CD14P08571 375 aa14.91□□□□□ -0.02
CHMP1A-208ENST00000550102 PATE4P0C8F1 98 aa14.91□□□□□ -0.02
CHMP1A-208ENST00000550102 NPR2P20594 1047 aa14.91□□□□□ -0.02
CHMP1A-208ENST00000550102 THBS4P35443 961 aa14.91□□□□□ -0.02
CHMP1A-208ENST00000550102 OMPP47874 163 aa14.91□□□□□ -0.02
CHMP1A-208ENST00000550102 ERVK-25P63136 954 aa14.91□□□□□ -0.02
CHMP1A-208ENST00000550102 GALK2Q01415 458 aa14.91□□□□□ -0.02
CHMP1A-208ENST00000550102 TNK1Q13470 666 aa14.91□□□□□ -0.02
CHMP1A-208ENST00000550102 RAB39AQ14964 217 aa14.91□□□□□ -0.02
CHMP1A-208ENST00000550102 THEM4Q5T1C6 240 aa14.91□□□□□ -0.02
CHMP1A-208ENST00000550102 KRT80Q6KB66 452 aa14.91□□□□□ -0.02
CHMP1A-208ENST00000550102 CYP2R1Q6VVX0 501 aa14.91□□□□□ -0.02
CHMP1A-208ENST00000550102 ZDHHC21Q8IVQ6 265 aa14.91□□□□□ -0.02
CHMP1A-208ENST00000550102 ARIH2OSQ8N7S6 290 aa14.91□□□□□ -0.02
CHMP1A-208ENST00000550102 NSMAFQ92636 917 aa14.91□□□□□ -0.02
CHMP1A-208ENST00000550102 ZNF570Q96NI8 536 aa14.91□□□□□ -0.02
CHMP1A-208ENST00000550102 RBP7Q96R05 134 aa14.91□□□□□ -0.02
CHMP1A-208ENST00000550102 C1orf198Q9H425 327 aa14.91□□□□□ -0.02
CHMP1A-208ENST00000550102 GSX1Q9H4S2 264 aaPredicted RBP14.91□□□□□ -0.02
CHMP1A-208ENST00000550102 RNF121Q9H920 327 aa14.91□□□□□ -0.02
CHMP1A-208ENST00000550102 IL1RAPQ9NPH3 570 aa14.91□□□□□ -0.02
CHMP1A-208ENST00000550102 GRHPRQ9UBQ7 328 aa14.91□□□□□ -0.02
CHMP1A-208ENST00000550102 FBXO9Q9UK97 447 aaPredicted RBP14.91□□□□□ -0.02
CHMP1A-208ENST00000550102 SIGLEC7Q9Y286 467 aa14.91□□□□□ -0.02
CHMP1A-208ENST00000550102 CSPG4Q6UVK1 2322 aa14.91□□□□□ -0.02
CHMP1A-208ENST00000550102 XKRYO14609 159 aa14.9□□□□□ -0.02
CHMP1A-208ENST00000550102 SSX4O60224 188 aa14.9□□□□□ -0.02
CHMP1A-208ENST00000550102 ZNF26P17031 533 aaPredicted RBP14.9□□□□□ -0.02
CHMP1A-208ENST00000550102 NR4A1P22736 598 aa14.9□□□□□ -0.02
CHMP1A-208ENST00000550102 CDAP32320 146 aa14.9□□□□□ -0.02
CHMP1A-208ENST00000550102 RPS23P62266 143 aaKnown RBP14.9□□□□□ -0.02
CHMP1A-208ENST00000550102 MST1LQ2TV78 715 aa14.9□□□□□ -0.02
CHMP1A-208ENST00000550102 LCN8Q6JVE9 175 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms