RNA–Protein interactions for RNA: ENST00000549537.6

TMEM116-208, Transcript of transmembrane protein 116, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TMEM116, Length 1,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-208ENST00000549537 ZNF317Q96PQ6 595 aaPredicted RBP5.78□□□□□ -1.48
TMEM116-208ENST00000549537 OR2M2Q96R28 347 aa5.78□□□□□ -1.48
TMEM116-208ENST00000549537 TMEM43Q9BTV4 400 aa5.78□□□□□ -1.48
TMEM116-208ENST00000549537 ZNF426Q9BUY5 554 aa5.78□□□□□ -1.48
TMEM116-208ENST00000549537 PCDHAC1Q9H158 963 aa5.78□□□□□ -1.48
TMEM116-208ENST00000549537 GPR35Q9HC97 309 aa5.78□□□□□ -1.48
TMEM116-208ENST00000549537 CBLN4Q9NTU7 201 aa5.78□□□□□ -1.48
TMEM116-208ENST00000549537 FAIMQ9NVQ4 179 aa5.78□□□□□ -1.48
TMEM116-208ENST00000549537 MRPL39Q9NYK5 338 aaKnown RBP5.78□□□□□ -1.48
TMEM116-208ENST00000549537 RABL2AQ9UBK7 228 aaPredicted RBP5.78□□□□□ -1.48
TMEM116-208ENST00000549537 RPS6KB2Q9UBS0 482 aa5.78□□□□□ -1.48
TMEM116-208ENST00000549537 ATP6V1G2-DDX39BF2Z307 99 aa5.77□□□□□ -1.49
TMEM116-208ENST00000549537 H7C417 338 aa5.77□□□□□ -1.49
TMEM116-208ENST00000549537 M0QX08 132 aa5.77□□□□□ -1.49
TMEM116-208ENST00000549537 PLPP3O14495 311 aa5.77□□□□□ -1.49
TMEM116-208ENST00000549537 CHP2O43745 196 aa5.77□□□□□ -1.49
TMEM116-208ENST00000549537 SLC43A1O75387 559 aa5.77□□□□□ -1.49
TMEM116-208ENST00000549537 IGKV3-15P01624 115 aa5.77□□□□□ -1.49
TMEM116-208ENST00000549537 CDH2P19022 906 aaPredicted RBP5.77□□□□□ -1.49
TMEM116-208ENST00000549537 CBLP22681 906 aa5.77□□□□□ -1.49
TMEM116-208ENST00000549537 SH3BGRP55822 239 aaPredicted RBP5.77□□□□□ -1.49
TMEM116-208ENST00000549537 NCALDP61601 193 aa5.77□□□□□ -1.49
TMEM116-208ENST00000549537 ROR2Q01974 943 aaKnown RBP5.77□□□□□ -1.49
TMEM116-208ENST00000549537 TEKQ02763 1124 aa5.77□□□□□ -1.49
TMEM116-208ENST00000549537 EGR3Q06889 387 aa5.77□□□□□ -1.49
TMEM116-208ENST00000549537 KLF10Q13118 480 aa5.77□□□□□ -1.49
TMEM116-208ENST00000549537 VEZF1Q14119 521 aa5.77□□□□□ -1.49
TMEM116-208ENST00000549537 MFSD13AQ14CX5 517 aa5.77□□□□□ -1.49
TMEM116-208ENST00000549537 VMACQ2NL98 169 aa5.77□□□□□ -1.49
TMEM116-208ENST00000549537 MST1LQ2TV78 715 aa5.77□□□□□ -1.49
TMEM116-208ENST00000549537 RABL3Q5HYI8 236 aa5.77□□□□□ -1.49
TMEM116-208ENST00000549537 ENTPD8Q5MY95 495 aa5.77□□□□□ -1.49
TMEM116-208ENST00000549537 NANOGP8Q6NSW7 305 aa5.77□□□□□ -1.49
TMEM116-208ENST00000549537 ANKRD16Q6P6B7 361 aa5.77□□□□□ -1.49
TMEM116-208ENST00000549537 ZNF613Q6PF04 617 aa5.77□□□□□ -1.49
TMEM116-208ENST00000549537 ZNF627Q7L945 461 aa5.77□□□□□ -1.49
TMEM116-208ENST00000549537 PATL1Q86TB9 770 aaKnown RBP5.77□□□□□ -1.49
TMEM116-208ENST00000549537 RANBP3LQ86VV4 465 aaPredicted RBP5.77□□□□□ -1.49
TMEM116-208ENST00000549537 SLC30A8Q8IWU4 369 aa5.77□□□□□ -1.49
TMEM116-208ENST00000549537 C20orf196Q8IYI0 205 aa5.77□□□□□ -1.49
TMEM116-208ENST00000549537 MUC15Q8N387 334 aa5.77□□□□□ -1.49
TMEM116-208ENST00000549537 OR8J3Q8NGG0 315 aa5.77□□□□□ -1.49
TMEM116-208ENST00000549537 OR10A6Q8NH74 314 aa5.77□□□□□ -1.49
TMEM116-208ENST00000549537 LRRC58Q96CX6 371 aa5.77□□□□□ -1.49
TMEM116-208ENST00000549537 SLC38A2Q96QD8 506 aa5.77□□□□□ -1.49
TMEM116-208ENST00000549537 MCHR1Q99705 422 aa5.77□□□□□ -1.49
TMEM116-208ENST00000549537 PRSS27Q9BQR3 290 aa5.77□□□□□ -1.49
TMEM116-208ENST00000549537 KATNB1Q9BVA0 655 aa5.77□□□□□ -1.49
TMEM116-208ENST00000549537 CACNG6Q9BXT2 260 aa5.77□□□□□ -1.49
TMEM116-208ENST00000549537 KRTAP9-3Q9BYQ3 159 aa5.77□□□□□ -1.49
TMEM116-208ENST00000549537 REG4Q9BYZ8 158 aa5.77□□□□□ -1.49
TMEM116-208ENST00000549537 CCDC134Q9H6E4 229 aa5.77□□□□□ -1.49
TMEM116-208ENST00000549537 NANOGQ9H9S0 305 aa5.77□□□□□ -1.49
TMEM116-208ENST00000549537 SEC61A2Q9H9S3 476 aa5.77□□□□□ -1.49
TMEM116-208ENST00000549537 TMEM27Q9HBJ8 222 aa5.77□□□□□ -1.49
TMEM116-208ENST00000549537 SAR1AQ9NR31 198 aa5.77□□□□□ -1.49
TMEM116-208ENST00000549537 AP5S1Q9NUS5 200 aa5.77□□□□□ -1.49
TMEM116-208ENST00000549537 FGFR1OP2Q9NVK5 253 aa5.77□□□□□ -1.49
TMEM116-208ENST00000549537 USP22Q9UPT9 525 aa5.77□□□□□ -1.49
TMEM116-208ENST00000549537 ARFGEF3Q5TH69 2177 aa5.76□□□□□ -1.49
TMEM116-208ENST00000549537 IGHV4-30-2A0A087WSY4 118 aa5.76□□□□□ -1.49
TMEM116-208ENST00000549537 ERICH4A6NGS2 130 aa5.76□□□□□ -1.49
TMEM116-208ENST00000549537 CPSF4LA6NMK7 179 aaKnown RBP5.76□□□□□ -1.49
TMEM116-208ENST00000549537 BBIP1A8MTZ0 92 aa5.76□□□□□ -1.49
TMEM116-208ENST00000549537 INAFM1C9JVW0 142 aa5.76□□□□□ -1.49
TMEM116-208ENST00000549537 MRASO14807 208 aa5.76□□□□□ -1.49
TMEM116-208ENST00000549537 KRT33AO76009 404 aa5.76□□□□□ -1.49
TMEM116-208ENST00000549537 MT-ATP6P00846 226 aa5.76□□□□□ -1.49
TMEM116-208ENST00000549537 NPPAP01160 153 aa5.76□□□□□ -1.49
TMEM116-208ENST00000549537 LPLP06858 475 aa5.76□□□□□ -1.49
TMEM116-208ENST00000549537 CELA3BP08861 270 aa5.76□□□□□ -1.49
TMEM116-208ENST00000549537 CECR9P0C854 216 aa5.76□□□□□ -1.49
TMEM116-208ENST00000549537 TROVE2P10155 538 aaKnown RBP eCLIP5.76□□□□□ -1.49
TMEM116-208ENST00000549537 PAX7P23759 505 aa5.76□□□□□ -1.49
TMEM116-208ENST00000549537 GTF2E2P29084 291 aaKnown RBP5.76□□□□□ -1.49
TMEM116-208ENST00000549537 CALCRP30988 508 aa5.76□□□□□ -1.49
TMEM116-208ENST00000549537 APOBEC3AP31941 199 aaPredicted RBP5.76□□□□□ -1.49
TMEM116-208ENST00000549537 FABP6P51161 128 aa5.76□□□□□ -1.49
TMEM116-208ENST00000549537 ARFIP2P53365 341 aa5.76□□□□□ -1.49
TMEM116-208ENST00000549537 SEC24CP53992 1094 aa5.76□□□□□ -1.49
TMEM116-208ENST00000549537 VAMP2P63027 116 aa5.76□□□□□ -1.49
TMEM116-208ENST00000549537 TUBA1BP68363 451 aa5.76□□□□□ -1.49
TMEM116-208ENST00000549537 TUBA4AP68366 448 aa5.76□□□□□ -1.49
TMEM116-208ENST00000549537 NAAAQ02083 359 aa5.76□□□□□ -1.49
TMEM116-208ENST00000549537 PUDPQ08623 228 aa5.76□□□□□ -1.49
TMEM116-208ENST00000549537 ZP4Q12836 540 aa5.76□□□□□ -1.49
TMEM116-208ENST00000549537 ZNF74Q16587 644 aa5.76□□□□□ -1.49
TMEM116-208ENST00000549537 CEACAM16Q2WEN9 425 aa5.76□□□□□ -1.49
TMEM116-208ENST00000549537 REP15Q6BDI9 236 aa5.76□□□□□ -1.49
TMEM116-208ENST00000549537 GPR139Q6DWJ6 353 aa5.76□□□□□ -1.49
TMEM116-208ENST00000549537 HMBOX1Q6NT76 420 aa5.76□□□□□ -1.49
TMEM116-208ENST00000549537 SHQ1Q6PI26 577 aaKnown RBP5.76□□□□□ -1.49
TMEM116-208ENST00000549537 KLHL24Q6TFL4 600 aa5.76□□□□□ -1.49
TMEM116-208ENST00000549537 TUBA1AQ71U36 451 aa5.76□□□□□ -1.49
TMEM116-208ENST00000549537 PXKQ7Z7A4 578 aa5.76□□□□□ -1.49
TMEM116-208ENST00000549537 PRIMA1Q86XR5 153 aa5.76□□□□□ -1.49
TMEM116-208ENST00000549537 UEVLDQ8IX04 471 aa5.76□□□□□ -1.49
TMEM116-208ENST00000549537 FBXL14Q8N1E6 418 aa5.76□□□□□ -1.49
TMEM116-208ENST00000549537 MAPK1IP1LQ8NDC0 245 aa5.76□□□□□ -1.49
TMEM116-208ENST00000549537 PIK3C3Q8NEB9 887 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms