RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 ZNF749O43361 778 aa10.05□□□□□ -0.8
LINC00661-204ENST00000549354 HCRTR2O43614 444 aa10.05□□□□□ -0.8
LINC00661-204ENST00000549354 ANXA2P07355 339 aaKnown RBP10.05□□□□□ -0.8
LINC00661-204ENST00000549354 PNLIPP16233 465 aa10.05□□□□□ -0.8
LINC00661-204ENST00000549354 NUP62P37198 522 aaPredicted RBP10.05□□□□□ -0.8
LINC00661-204ENST00000549354 PRSS12P56730 875 aa10.05□□□□□ -0.8
LINC00661-204ENST00000549354 HSD17B7P56937 341 aa10.05□□□□□ -0.8
LINC00661-204ENST00000549354 ZNHIT3Q15649 155 aaPredicted RBP10.05□□□□□ -0.8
LINC00661-204ENST00000549354 RSPO4Q2I0M5 234 aaPredicted RBP10.05□□□□□ -0.8
LINC00661-204ENST00000549354 PCGF3Q3KNV8 242 aa10.05□□□□□ -0.8
LINC00661-204ENST00000549354 CLLU1Q5K131 121 aa10.05□□□□□ -0.8
LINC00661-204ENST00000549354 ARSKQ6UWY0 536 aa10.05□□□□□ -0.8
LINC00661-204ENST00000549354 MARCH3Q86UD3 253 aa10.05□□□□□ -0.8
LINC00661-204ENST00000549354 KMT5CQ86Y97 462 aa10.05□□□□□ -0.8
LINC00661-204ENST00000549354 D2HGDHQ8N465 521 aa10.05□□□□□ -0.8
LINC00661-204ENST00000549354 TOR1AIP2Q8NFQ8 470 aa10.05□□□□□ -0.8
LINC00661-204ENST00000549354 ST8SIA4Q92187 359 aa10.05□□□□□ -0.8
LINC00661-204ENST00000549354 WNT2BQ93097 391 aa10.05□□□□□ -0.8
LINC00661-204ENST00000549354 SLC25A38Q96DW6 304 aa10.05□□□□□ -0.8
LINC00661-204ENST00000549354 SLC41A2Q96JW4 573 aa10.05□□□□□ -0.8
LINC00661-204ENST00000549354 ARPC5LQ9BPX5 153 aa10.05□□□□□ -0.8
LINC00661-204ENST00000549354 NCDNQ9UBB6 729 aa10.05□□□□□ -0.8
LINC00661-204ENST00000549354 CGGBP1Q9UFW8 167 aaPredicted RBP10.05□□□□□ -0.8
LINC00661-204ENST00000549354 MRPS33Q9Y291 106 aaKnown RBP10.05□□□□□ -0.8
LINC00661-204ENST00000549354 KLHDC2Q9Y2U9 406 aa10.05□□□□□ -0.8
LINC00661-204ENST00000549354 NPFFR2Q9Y5X5 522 aa10.05□□□□□ -0.8
LINC00661-204ENST00000549354 SHISA8B8ZZ34 492 aa10.05□□□□□ -0.8
LINC00661-204ENST00000549354 GOSR2O14653 212 aa10.05□□□□□ -0.8
LINC00661-204ENST00000549354 IGF2P01344 180 aa10.05□□□□□ -0.8
LINC00661-204ENST00000549354 IFNGP01579 166 aa10.05□□□□□ -0.8
LINC00661-204ENST00000549354 ZNF35P13682 527 aa10.05□□□□□ -0.8
LINC00661-204ENST00000549354 NFYAP23511 347 aaPredicted RBP10.05□□□□□ -0.8
LINC00661-204ENST00000549354 CD1CP29017 333 aa10.05□□□□□ -0.8
LINC00661-204ENST00000549354 OR1D5P58170 312 aa10.05□□□□□ -0.8
LINC00661-204ENST00000549354 ZXDAP98168 799 aa10.05□□□□□ -0.8
LINC00661-204ENST00000549354 GRM7Q14831 915 aa10.05□□□□□ -0.8
LINC00661-204ENST00000549354 EIPR1Q53HC9 387 aa10.05□□□□□ -0.8
LINC00661-204ENST00000549354 PMS2CLQ68D20 193 aa10.05□□□□□ -0.8
LINC00661-204ENST00000549354 OR7E24Q6IFN5 339 aa10.05□□□□□ -0.8
LINC00661-204ENST00000549354 TMEM205Q6UW68 189 aa10.05□□□□□ -0.8
LINC00661-204ENST00000549354 JAZF1Q86VZ6 243 aa10.05□□□□□ -0.8
LINC00661-204ENST00000549354 PLXDC1Q8IUK5 500 aa10.05□□□□□ -0.8
LINC00661-204ENST00000549354 NSMAFQ92636 917 aa10.05□□□□□ -0.8
LINC00661-204ENST00000549354 MVB12AQ96EY5 273 aa10.05□□□□□ -0.8
LINC00661-204ENST00000549354 NRIP3Q9NQ35 241 aa10.05□□□□□ -0.8
LINC00661-204ENST00000549354 IFITM5A6NNB3 132 aa10.04□□□□□ -0.8
LINC00661-204ENST00000549354 BRINP1O60477 761 aa10.04□□□□□ -0.8
LINC00661-204ENST00000549354 DBIP07108 87 aaKnown RBP10.04□□□□□ -0.8
LINC00661-204ENST00000549354 M6PRP20645 277 aa10.04□□□□□ -0.8
LINC00661-204ENST00000549354 HSD11B2P80365 405 aa10.04□□□□□ -0.8
LINC00661-204ENST00000549354 TOMM34Q15785 309 aaPredicted RBP10.04□□□□□ -0.8
LINC00661-204ENST00000549354 DCAF12L2Q5VW00 463 aa10.04□□□□□ -0.8
LINC00661-204ENST00000549354 LIPNQ5VXI9 398 aa10.04□□□□□ -0.8
LINC00661-204ENST00000549354 PEAR1Q5VY43 1037 aaPredicted RBP10.04□□□□□ -0.8
LINC00661-204ENST00000549354 FAM199XQ6PEV8 388 aaPredicted RBP10.04□□□□□ -0.8
LINC00661-204ENST00000549354 CORO6Q6QEF8 472 aa10.04□□□□□ -0.8
LINC00661-204ENST00000549354 CD163Q86VB7 1156 aa10.04□□□□□ -0.8
LINC00661-204ENST00000549354 COMMD2Q86X83 199 aa10.04□□□□□ -0.8
LINC00661-204ENST00000549354 HAVCR2Q8TDQ0 301 aa10.04□□□□□ -0.8
LINC00661-204ENST00000549354 FBXW5Q969U6 566 aa10.04□□□□□ -0.8
LINC00661-204ENST00000549354 S100A16Q96FQ6 103 aaKnown RBP10.04□□□□□ -0.8
LINC00661-204ENST00000549354 DMRTA2Q96SC8 542 aa10.04□□□□□ -0.8
LINC00661-204ENST00000549354 NUDT22Q9BRQ3 303 aa10.04□□□□□ -0.8
LINC00661-204ENST00000549354 CHST6Q9GZX3 395 aa10.04□□□□□ -0.8
LINC00661-204ENST00000549354 KLHL9Q9P2J3 617 aa10.04□□□□□ -0.8
LINC00661-204ENST00000549354 TMEM184BQ9Y519 407 aaPredicted RBP10.04□□□□□ -0.8
LINC00661-204ENST00000549354 CREBL2O60519 120 aaPredicted RBP10.04□□□□□ -0.8
LINC00661-204ENST00000549354 MPZL1O95297 269 aa10.04□□□□□ -0.8
LINC00661-204ENST00000549354 SPARCP09486 303 aa10.04□□□□□ -0.8
LINC00661-204ENST00000549354 EFNB2P52799 333 aa10.04□□□□□ -0.8
LINC00661-204ENST00000549354 TAS2R43P59537 309 aa10.04□□□□□ -0.8
LINC00661-204ENST00000549354 DEFA5Q01523 94 aa10.04□□□□□ -0.8
LINC00661-204ENST00000549354 TAGLNQ01995 201 aaKnown RBP10.04□□□□□ -0.8
LINC00661-204ENST00000549354 BDH1Q02338 343 aa10.04□□□□□ -0.8
LINC00661-204ENST00000549354 ARHGAP40Q5TG30 622 aa10.04□□□□□ -0.8
LINC00661-204ENST00000549354 LYSMD4Q5XG99 296 aa10.04□□□□□ -0.8
LINC00661-204ENST00000549354 SLC6A19Q695T7 634 aa10.04□□□□□ -0.8
LINC00661-204ENST00000549354 LRFN4Q6PJG9 635 aa10.04□□□□□ -0.8
LINC00661-204ENST00000549354 FOXRED2Q8IWF2 684 aa10.04□□□□□ -0.8
LINC00661-204ENST00000549354 CASTOR1Q8WTX7 329 aa10.04□□□□□ -0.8
LINC00661-204ENST00000549354 TMEM106AQ96A25 262 aa10.04□□□□□ -0.8
LINC00661-204ENST00000549354 C3orf49Q96BT1 292 aa10.04□□□□□ -0.8
LINC00661-204ENST00000549354 OR11A1Q9GZK7 315 aa10.04□□□□□ -0.8
LINC00661-204ENST00000549354 ANKRD10Q9NXR5 420 aa10.04□□□□□ -0.8
LINC00661-204ENST00000549354 COPZ2Q9P299 210 aa10.04□□□□□ -0.8
LINC00661-204ENST00000549354 OR5V1Q9UGF6 321 aa10.04□□□□□ -0.8
LINC00661-204ENST00000549354 PILRBQ9UKJ0 227 aa10.04□□□□□ -0.8
LINC00661-204ENST00000549354 PCDHGA9Q9Y5G4 932 aaKnown RBP10.04□□□□□ -0.8
LINC00661-204ENST00000549354 CLDN4O14493 209 aa10.04□□□□□ -0.8
LINC00661-204ENST00000549354 DUX1O43812 170 aa10.04□□□□□ -0.8
LINC00661-204ENST00000549354 SC5DO75845 299 aa10.04□□□□□ -0.8
LINC00661-204ENST00000549354 OR6A2O95222 327 aa10.04□□□□□ -0.8
LINC00661-204ENST00000549354 SLC6A6P31641 620 aa10.04□□□□□ -0.8
LINC00661-204ENST00000549354 CDKN2AP42771 156 aaKnown RBP10.04□□□□□ -0.8
LINC00661-204ENST00000549354 P2RX1P51575 399 aa10.04□□□□□ -0.8
LINC00661-204ENST00000549354 FUT7Q11130 342 aa10.04□□□□□ -0.8
LINC00661-204ENST00000549354 CBFBQ13951 182 aa10.04□□□□□ -0.8
LINC00661-204ENST00000549354 ELP2Q6IA86 826 aa10.04□□□□□ -0.8
LINC00661-204ENST00000549354 ATRAIDQ6UW56 229 aa10.04□□□□□ -0.8
LINC00661-204ENST00000549354 LINC00346Q8IVM7 164 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms