RNA–Protein interactions for RNA: ENST00000549249.5

DEPDC4-207, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-207ENST00000549249 RAB36O95755 333 aa7.18□□□□□ -1.26
DEPDC4-207ENST00000549249 GPANK1O95872 356 aa7.18□□□□□ -1.26
DEPDC4-207ENST00000549249 PTHP01270 115 aa7.18□□□□□ -1.26
DEPDC4-207ENST00000549249 TFP02787 698 aa7.18□□□□□ -1.26
DEPDC4-207ENST00000549249 LCKP06239 509 aa7.18□□□□□ -1.26
DEPDC4-207ENST00000549249 MRPL3P09001 348 aaKnown RBP7.18□□□□□ -1.26
DEPDC4-207ENST00000549249 PGA4P0DJD7 388 aa7.18□□□□□ -1.26
DEPDC4-207ENST00000549249 PGA3P0DJD8 388 aa7.18□□□□□ -1.26
DEPDC4-207ENST00000549249 JUNBP17275 347 aaPredicted RBP7.18□□□□□ -1.26
DEPDC4-207ENST00000549249 HOXB4P17483 251 aaPredicted RBP7.18□□□□□ -1.26
DEPDC4-207ENST00000549249 CD79BP40259 229 aa7.18□□□□□ -1.26
DEPDC4-207ENST00000549249 SLC16A1P53985 500 aa7.18□□□□□ -1.26
DEPDC4-207ENST00000549249 RAP1BP61224 184 aa7.18□□□□□ -1.26
DEPDC4-207ENST00000549249 RPS3AP61247 264 aaKnown RBP7.18□□□□□ -1.26
DEPDC4-207ENST00000549249 RPS7P62081 194 aaKnown RBP7.18□□□□□ -1.26
DEPDC4-207ENST00000549249 RAP1AP62834 184 aa7.18□□□□□ -1.26
DEPDC4-207ENST00000549249 EMX1Q04741 257 aaPredicted RBP7.18□□□□□ -1.26
DEPDC4-207ENST00000549249 RAB40BQ12829 278 aa7.18□□□□□ -1.26
DEPDC4-207ENST00000549249 C1DQ13901 141 aaKnown RBP7.18□□□□□ -1.26
DEPDC4-207ENST00000549249 GGTLC2Q14390 218 aa7.18□□□□□ -1.26
DEPDC4-207ENST00000549249 PON3Q15166 354 aa7.18□□□□□ -1.26
DEPDC4-207ENST00000549249 TBCEQ15813 527 aaPredicted RBP7.18□□□□□ -1.26
DEPDC4-207ENST00000549249 SLC35D3Q5M8T2 416 aa7.18□□□□□ -1.26
DEPDC4-207ENST00000549249 PHYHD1Q5SRE7 291 aa7.18□□□□□ -1.26
DEPDC4-207ENST00000549249 ADGRE4PQ86SQ3 457 aa7.18□□□□□ -1.26
DEPDC4-207ENST00000549249 ZBTB46Q86UZ6 589 aa7.18□□□□□ -1.26
DEPDC4-207ENST00000549249 Q8N3U1 123 aa7.18□□□□□ -1.26
DEPDC4-207ENST00000549249 STX19Q8N4C7 294 aa7.18□□□□□ -1.26
DEPDC4-207ENST00000549249 RFLNBQ8N5W9 214 aa7.18□□□□□ -1.26
DEPDC4-207ENST00000549249 SYT14Q8NB59 555 aa7.18□□□□□ -1.26
DEPDC4-207ENST00000549249 OR51G2Q8NGK0 314 aa7.18□□□□□ -1.26
DEPDC4-207ENST00000549249 FNDC9Q8TBE3 224 aa7.18□□□□□ -1.26
DEPDC4-207ENST00000549249 SMAP2Q8WU79 429 aaPredicted RBP7.18□□□□□ -1.26
DEPDC4-207ENST00000549249 RFKQ969G6 155 aa7.18□□□□□ -1.26
DEPDC4-207ENST00000549249 MYDGFQ969H8 173 aa7.18□□□□□ -1.26
DEPDC4-207ENST00000549249 TMIGD2Q96BF3 282 aa7.18□□□□□ -1.26
DEPDC4-207ENST00000549249 OR2M2Q96R28 347 aa7.18□□□□□ -1.26
DEPDC4-207ENST00000549249 ZNF649Q9BS31 505 aa7.18□□□□□ -1.26
DEPDC4-207ENST00000549249 ALG12Q9BV10 488 aa7.18□□□□□ -1.26
DEPDC4-207ENST00000549249 SF3B5Q9BWJ5 86 aaKnown RBP7.18□□□□□ -1.26
DEPDC4-207ENST00000549249 CDCA4Q9BXL8 241 aa7.18□□□□□ -1.26
DEPDC4-207ENST00000549249 CCDC90BQ9GZT6 254 aa7.18□□□□□ -1.26
DEPDC4-207ENST00000549249 ADGRL4Q9HBW9 690 aa7.18□□□□□ -1.26
DEPDC4-207ENST00000549249 SRA1Q9HD15 236 aaKnown RBP7.18□□□□□ -1.26
DEPDC4-207ENST00000549249 ACOT13Q9NPJ3 140 aa7.18□□□□□ -1.26
DEPDC4-207ENST00000549249 TIGARQ9NQ88 270 aa7.18□□□□□ -1.26
DEPDC4-207ENST00000549249 HAO2Q9NYQ3 351 aa7.18□□□□□ -1.26
DEPDC4-207ENST00000549249 CLEC2DQ9UHP7 191 aa7.18□□□□□ -1.26
DEPDC4-207ENST00000549249 TUBD1Q9UJT1 453 aa7.18□□□□□ -1.26
DEPDC4-207ENST00000549249 DIMT1Q9UNQ2 313 aaKnown RBP7.18□□□□□ -1.26
DEPDC4-207ENST00000549249 B9D1Q9UPM9 204 aa7.18□□□□□ -1.26
DEPDC4-207ENST00000549249 CAMK2AQ9UQM7 478 aa7.18□□□□□ -1.26
DEPDC4-207ENST00000549249 PCDHGB1Q9Y5G3 927 aa7.18□□□□□ -1.26
DEPDC4-207ENST00000549249 FKBP7Q9Y680 259 aa7.18□□□□□ -1.26
DEPDC4-207ENST00000549249 SPENQ96T58 3664 aaKnown RBP7.18□□□□□ -1.26
DEPDC4-207ENST00000549249 SHANK1Q9Y566 2161 aa7.18□□□□□ -1.26
DEPDC4-207ENST00000549249 MGAQ8IWI9 3026 aa7.17□□□□□ -1.26
DEPDC4-207ENST00000549249 SPTA1P02549 2419 aa7.17□□□□□ -1.26
DEPDC4-207ENST00000549249 IGKV3D-15A0A087WSY6 115 aa7.17□□□□□ -1.26
DEPDC4-207ENST00000549249 DPPA5A6NC42 116 aa7.17□□□□□ -1.26
DEPDC4-207ENST00000549249 TVP23AA6NH52 213 aa7.17□□□□□ -1.26
DEPDC4-207ENST00000549249 SNTNA6NMZ2 147 aa7.17□□□□□ -1.26
DEPDC4-207ENST00000549249 B8ZZF3 427 aa7.17□□□□□ -1.26
DEPDC4-207ENST00000549249 M0R3G1 203 aa7.17□□□□□ -1.26
DEPDC4-207ENST00000549249 KALRNO60229 2985 aa7.17□□□□□ -1.26
DEPDC4-207ENST00000549249 SLC16A7O60669 478 aa7.17□□□□□ -1.26
DEPDC4-207ENST00000549249 ZNF432O94892 652 aa7.17□□□□□ -1.26
DEPDC4-207ENST00000549249 SYNGR4O95473 234 aa7.17□□□□□ -1.26
DEPDC4-207ENST00000549249 TGM6O95932 706 aa7.17□□□□□ -1.26
DEPDC4-207ENST00000549249 IGHG1P01857 330 aa7.17□□□□□ -1.26
DEPDC4-207ENST00000549249 CRYABP02511 175 aaKnown RBP7.17□□□□□ -1.26
DEPDC4-207ENST00000549249 SBK2P0C263 348 aa7.17□□□□□ -1.26
DEPDC4-207ENST00000549249 SFTPCP11686 197 aa7.17□□□□□ -1.26
DEPDC4-207ENST00000549249 EDNRAP25101 427 aa7.17□□□□□ -1.26
DEPDC4-207ENST00000549249 PTGS2P35354 604 aa7.17□□□□□ -1.26
DEPDC4-207ENST00000549249 NAA10P41227 235 aaPredicted RBP7.17□□□□□ -1.26
DEPDC4-207ENST00000549249 SELENOPP49908 381 aa7.17□□□□□ -1.26
DEPDC4-207ENST00000549249 ETV1P50549 477 aa7.17□□□□□ -1.26
DEPDC4-207ENST00000549249 TDGF1P3P51864 188 aa7.17□□□□□ -1.26
DEPDC4-207ENST00000549249 GP2P55259 537 aaKnown RBP7.17□□□□□ -1.26
DEPDC4-207ENST00000549249 ZNF85Q03923 595 aa7.17□□□□□ -1.26
DEPDC4-207ENST00000549249 LGALS3BPQ08380 585 aa7.17□□□□□ -1.26
DEPDC4-207ENST00000549249 RASGEF1BQ0VAM2 473 aa7.17□□□□□ -1.26
DEPDC4-207ENST00000549249 TMED1Q13445 227 aa7.17□□□□□ -1.26
DEPDC4-207ENST00000549249 NEDD8Q15843 81 aa7.17□□□□□ -1.26
DEPDC4-207ENST00000549249 HIST3H3Q16695 136 aa7.17□□□□□ -1.26
DEPDC4-207ENST00000549249 C11orf91Q3C1V1 193 aa7.17□□□□□ -1.26
DEPDC4-207ENST00000549249 KLHL22Q53GT1 634 aa7.17□□□□□ -1.26
DEPDC4-207ENST00000549249 PRR30Q53SZ7 412 aaPredicted RBP7.17□□□□□ -1.26
DEPDC4-207ENST00000549249 LCN1P1Q5VSP4 162 aa7.17□□□□□ -1.26
DEPDC4-207ENST00000549249 OTPQ5XKR4 325 aa7.17□□□□□ -1.26
DEPDC4-207ENST00000549249 CARD17Q5XLA6 110 aa7.17□□□□□ -1.26
DEPDC4-207ENST00000549249 SLC25A47Q6Q0C1 308 aa7.17□□□□□ -1.26
DEPDC4-207ENST00000549249 SSX6Q7RTT6 188 aa7.17□□□□□ -1.26
DEPDC4-207ENST00000549249 SATL1Q86VE3 508 aa7.17□□□□□ -1.26
DEPDC4-207ENST00000549249 TIGD4Q8IY51 512 aa7.17□□□□□ -1.26
DEPDC4-207ENST00000549249 PROKR2Q8NFJ6 384 aa7.17□□□□□ -1.26
DEPDC4-207ENST00000549249 OR6K6Q8NGW6 343 aa7.17□□□□□ -1.26
DEPDC4-207ENST00000549249 OR2T4Q8NH00 348 aa7.17□□□□□ -1.26
DEPDC4-207ENST00000549249 TMEM54Q969K7 222 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms