RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 TNK1Q13470 666 aa13.67□□□□□ -0.22
DDX54-205ENST00000548786 HIST3H3Q16695 136 aa13.67□□□□□ -0.22
DDX54-205ENST00000548786 C3orf36Q3SXR2 165 aa13.67□□□□□ -0.22
DDX54-205ENST00000548786 ZBED5Q49AG3 693 aa13.67□□□□□ -0.22
DDX54-205ENST00000548786 IQCCQ4KMZ1 466 aa13.67□□□□□ -0.22
DDX54-205ENST00000548786 TMPRSS11FQ6ZWK6 438 aa13.67□□□□□ -0.22
DDX54-205ENST00000548786 SLC16A14Q7RTX9 510 aa13.67□□□□□ -0.22
DDX54-205ENST00000548786 ZDHHC21Q8IVQ6 265 aa13.67□□□□□ -0.22
DDX54-205ENST00000548786 FAM169BQ8N8A8 192 aa13.67□□□□□ -0.22
DDX54-205ENST00000548786 MAPK1IP1LQ8NDC0 245 aa13.67□□□□□ -0.22
DDX54-205ENST00000548786 RSRC1Q96IZ7 334 aaKnown RBP13.67□□□□□ -0.22
DDX54-205ENST00000548786 KCNK17Q96T54 332 aa13.67□□□□□ -0.22
DDX54-205ENST00000548786 MOV10Q9HCE1 1003 aaKnown RBP13.67□□□□□ -0.22
DDX54-205ENST00000548786 AURKCQ9UQB9 309 aa13.67□□□□□ -0.22
DDX54-205ENST00000548786 A0A1W2PPL8 197 aa13.66□□□□□ -0.22
DDX54-205ENST00000548786 HTR3EA5X5Y0 456 aa13.66□□□□□ -0.22
DDX54-205ENST00000548786 LY6HO94772 140 aa13.66□□□□□ -0.22
DDX54-205ENST00000548786 IGHMP01871 453 aa13.66□□□□□ -0.22
DDX54-205ENST00000548786 CCL2P13500 99 aa13.66□□□□□ -0.22
DDX54-205ENST00000548786 ZNF14P17017 642 aaPredicted RBP13.66□□□□□ -0.22
DDX54-205ENST00000548786 PAX7P23759 505 aa13.66□□□□□ -0.22
DDX54-205ENST00000548786 RRM2P31350 389 aa13.66□□□□□ -0.22
DDX54-205ENST00000548786 SERPINF1P36955 418 aa13.66□□□□□ -0.22
DDX54-205ENST00000548786 OMPP47874 163 aa13.66□□□□□ -0.22
DDX54-205ENST00000548786 LIMS1P48059 325 aa13.66□□□□□ -0.22
DDX54-205ENST00000548786 NUDT6P53370 316 aa13.66□□□□□ -0.22
DDX54-205ENST00000548786 CHRNB3Q05901 458 aa13.66□□□□□ -0.22
DDX54-205ENST00000548786 DAG1Q14118 895 aa13.66□□□□□ -0.22
DDX54-205ENST00000548786 ADIPOQQ15848 244 aa13.66□□□□□ -0.22
DDX54-205ENST00000548786 SGCAQ16586 387 aa13.66□□□□□ -0.22
DDX54-205ENST00000548786 OR4F15Q8NGB8 312 aa13.66□□□□□ -0.22
DDX54-205ENST00000548786 ZNF519Q8TB69 540 aa13.66□□□□□ -0.22
DDX54-205ENST00000548786 RASD2Q96D21 266 aa13.66□□□□□ -0.22
DDX54-205ENST00000548786 Q96M85 177 aa13.66□□□□□ -0.22
DDX54-205ENST00000548786 ZNF75AQ96N20 296 aa13.66□□□□□ -0.22
DDX54-205ENST00000548786 FOXN4Q96NZ1 517 aa13.66□□□□□ -0.22
DDX54-205ENST00000548786 GPA33Q99795 319 aa13.66□□□□□ -0.22
DDX54-205ENST00000548786 BDH2Q9BUT1 245 aa13.66□□□□□ -0.22
DDX54-205ENST00000548786 OR51B6Q9H340 312 aa13.66□□□□□ -0.22
DDX54-205ENST00000548786 STX18Q9P2W9 335 aaKnown RBP13.66□□□□□ -0.22
DDX54-205ENST00000548786 GRHPRQ9UBQ7 328 aa13.66□□□□□ -0.22
DDX54-205ENST00000548786 UGT2A1Q9Y4X1 527 aa13.66□□□□□ -0.22
DDX54-205ENST00000548786 TEX13CA0A0J9YWL9 993 aa13.65□□□□□ -0.22
DDX54-205ENST00000548786 SH3PXD2BA1X283 911 aa13.65□□□□□ -0.22
DDX54-205ENST00000548786 UNC119BA6NIH7 251 aa13.65□□□□□ -0.22
DDX54-205ENST00000548786 NPIPB13A6NJU9 1138 aa13.65□□□□□ -0.22
DDX54-205ENST00000548786 NPIPB4C9JG80 1138 aa13.65□□□□□ -0.22
DDX54-205ENST00000548786 RNF223E7ERA6 249 aa13.65□□□□□ -0.22
DDX54-205ENST00000548786 GPRIN2O60269 458 aa13.65□□□□□ -0.22
DDX54-205ENST00000548786 SNRPD2P62316 118 aaKnown RBP13.65□□□□□ -0.22
DDX54-205ENST00000548786 MS4A2Q01362 244 aa13.65□□□□□ -0.22
DDX54-205ENST00000548786 RAB35Q15286 201 aa13.65□□□□□ -0.22
DDX54-205ENST00000548786 TAF11Q15544 211 aa13.65□□□□□ -0.22
DDX54-205ENST00000548786 MST1LQ2TV78 715 aa13.65□□□□□ -0.22
DDX54-205ENST00000548786 SPATS1Q496A3 300 aa13.65□□□□□ -0.22
DDX54-205ENST00000548786 MESTQ5EB52 335 aa13.65□□□□□ -0.22
DDX54-205ENST00000548786 C10orf128Q5T292 105 aa13.65□□□□□ -0.22
DDX54-205ENST00000548786 TMEM53Q6P2H8 277 aa13.65□□□□□ -0.22
DDX54-205ENST00000548786 THSD4Q6ZMP0 1018 aa13.65□□□□□ -0.22
DDX54-205ENST00000548786 TRPM8Q7Z2W7 1104 aa13.65□□□□□ -0.22
DDX54-205ENST00000548786 DHFR2Q86XF0 187 aa13.65□□□□□ -0.22
DDX54-205ENST00000548786 ZNF584Q8IVC4 421 aa13.65□□□□□ -0.22
DDX54-205ENST00000548786 SVOPLQ8N434 492 aa13.65□□□□□ -0.22
DDX54-205ENST00000548786 NMD3Q96D46 503 aaKnown RBP13.65□□□□□ -0.22
DDX54-205ENST00000548786 COX4I2Q96KJ9 171 aa13.65□□□□□ -0.22
DDX54-205ENST00000548786 DHRS1Q96LJ7 313 aa13.65□□□□□ -0.22
DDX54-205ENST00000548786 ZNF570Q96NI8 536 aa13.65□□□□□ -0.22
DDX54-205ENST00000548786 VRK1Q99986 396 aaPredicted RBP13.65□□□□□ -0.22
DDX54-205ENST00000548786 FUZQ9BT04 418 aa13.65□□□□□ -0.22
DDX54-205ENST00000548786 GRIP2Q9C0E4 1043 aa13.65□□□□□ -0.22
DDX54-205ENST00000548786 RERGLQ9H628 205 aa13.65□□□□□ -0.22
DDX54-205ENST00000548786 DENND2DQ9H6A0 471 aaPredicted RBP13.65□□□□□ -0.22
DDX54-205ENST00000548786 ACTR3BQ9P1U1 418 aa13.65□□□□□ -0.22
DDX54-205ENST00000548786 FZR1Q9UM11 496 aa13.65□□□□□ -0.22
DDX54-205ENST00000548786 SIGLEC7Q9Y286 467 aa13.65□□□□□ -0.22
DDX54-205ENST00000548786 NIPBLQ6KC79 2804 aaeCLIP13.65□□□□□ -0.22
DDX54-205ENST00000548786 A6NIZ1 184 aa13.64□□□□□ -0.23
DDX54-205ENST00000548786 CENPBD1B2RD01 187 aa13.64□□□□□ -0.23
DDX54-205ENST00000548786 SOCS2O14508 198 aa13.64□□□□□ -0.23
DDX54-205ENST00000548786 XKRYO14609 159 aa13.64□□□□□ -0.23
DDX54-205ENST00000548786 OR10H3O60404 316 aa13.64□□□□□ -0.23
DDX54-205ENST00000548786 UBOX5O94941 541 aa13.64□□□□□ -0.23
DDX54-205ENST00000548786 NDUFB2O95178 105 aa13.64□□□□□ -0.23
DDX54-205ENST00000548786 CD14P08571 375 aa13.64□□□□□ -0.23
DDX54-205ENST00000548786 FOSL1P15407 271 aa13.64□□□□□ -0.23
DDX54-205ENST00000548786 SMIM11AP58511 58 aa13.64□□□□□ -0.23
DDX54-205ENST00000548786 RAP1BP61224 184 aa13.64□□□□□ -0.23
DDX54-205ENST00000548786 RAP1AP62834 184 aa13.64□□□□□ -0.23
DDX54-205ENST00000548786 GALK2Q01415 458 aa13.64□□□□□ -0.23
DDX54-205ENST00000548786 PPP1R8Q12972 351 aaKnown RBP13.64□□□□□ -0.23
DDX54-205ENST00000548786 SLC36A2Q495M3 483 aa13.64□□□□□ -0.23
DDX54-205ENST00000548786 OTPQ5XKR4 325 aa13.64□□□□□ -0.23
DDX54-205ENST00000548786 FAM205BPQ63HN1 556 aa13.64□□□□□ -0.23
DDX54-205ENST00000548786 SLC25A47Q6Q0C1 308 aa13.64□□□□□ -0.23
DDX54-205ENST00000548786 CLEC9AQ6UXN8 241 aa13.64□□□□□ -0.23
DDX54-205ENST00000548786 PAQR4Q8N4S7 273 aaPredicted RBP13.64□□□□□ -0.23
DDX54-205ENST00000548786 ZNF525Q8N782 197 aa13.64□□□□□ -0.23
DDX54-205ENST00000548786 ARIH2OSQ8N7S6 290 aa13.64□□□□□ -0.23
DDX54-205ENST00000548786 NUP37Q8NFH4 326 aa13.64□□□□□ -0.23
DDX54-205ENST00000548786 FANK1Q8TC84 345 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms