RNA–Protein interactions for RNA: ENST00000548539.1

VPS29-205, Transcript of VPS29, retromer complex component, humanhuman

TSL 3

Gene VPS29, Length 598 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-205ENST00000548539 PINLYPA6NC86 204 aa2.73□□□□□ -1.97
VPS29-205ENST00000548539 FAM166BA8MTA8 275 aa2.73□□□□□ -1.97
VPS29-205ENST00000548539 TEX46H3BTG2 121 aa2.73□□□□□ -1.97
VPS29-205ENST00000548539 PEX7O00628 323 aa2.73□□□□□ -1.97
VPS29-205ENST00000548539 KMOO15229 486 aa2.73□□□□□ -1.97
VPS29-205ENST00000548539 KLHL41O60662 606 aa2.73□□□□□ -1.97
VPS29-205ENST00000548539 CLPXO76031 633 aa2.73□□□□□ -1.97
VPS29-205ENST00000548539 IGHV3-43DP0DP04 118 aa2.73□□□□□ -1.97
VPS29-205ENST00000548539 ZNF250P15622 560 aa2.73□□□□□ -1.97
VPS29-205ENST00000548539 GALP22466 123 aa2.73□□□□□ -1.97
VPS29-205ENST00000548539 AK4P27144 223 aaPredicted RBP2.73□□□□□ -1.97
VPS29-205ENST00000548539 TNNT2P45379 298 aaPredicted RBP2.73□□□□□ -1.97
VPS29-205ENST00000548539 CSNK1DP48730 415 aa2.73□□□□□ -1.97
VPS29-205ENST00000548539 SSR4P51571 173 aa2.73□□□□□ -1.97
VPS29-205ENST00000548539 CRISP3P54108 245 aa2.73□□□□□ -1.97
VPS29-205ENST00000548539 C21orf59P57076 290 aa2.73□□□□□ -1.97
VPS29-205ENST00000548539 RGS8P57771 180 aaPredicted RBP2.73□□□□□ -1.97
VPS29-205ENST00000548539 SELENBP1Q13228 472 aa2.73□□□□□ -1.97
VPS29-205ENST00000548539 CHRNA6Q15825 494 aa2.73□□□□□ -1.97
VPS29-205ENST00000548539 C9orf135Q5VTT2 229 aa2.73□□□□□ -1.97
VPS29-205ENST00000548539 CYB5R2Q6BCY4 276 aa2.73□□□□□ -1.97
VPS29-205ENST00000548539 ZNF530Q6P9A1 599 aaPredicted RBP2.73□□□□□ -1.97
VPS29-205ENST00000548539 EIF3MQ7L2H7 374 aaKnown RBP2.73□□□□□ -1.97
VPS29-205ENST00000548539 CENPQQ7L2Z9 268 aaPredicted RBP2.73□□□□□ -1.97
VPS29-205ENST00000548539 SLC16A14Q7RTX9 510 aa2.73□□□□□ -1.97
VPS29-205ENST00000548539 MKXQ8IYA7 352 aa2.73□□□□□ -1.97
VPS29-205ENST00000548539 OFCC1Q8IZS5 231 aa2.73□□□□□ -1.97
VPS29-205ENST00000548539 OR51G1Q8NGK1 321 aa2.73□□□□□ -1.97
VPS29-205ENST00000548539 OR4A4PQ8NGN8 299 aa2.73□□□□□ -1.97
VPS29-205ENST00000548539 OR6X1Q8NH79 312 aa2.73□□□□□ -1.97
VPS29-205ENST00000548539 BLOC1S5Q8TDH9 187 aa2.73□□□□□ -1.97
VPS29-205ENST00000548539 MCUR1Q96AQ8 359 aa2.73□□□□□ -1.97
VPS29-205ENST00000548539 NAP1L5Q96NT1 182 aaPredicted RBP2.73□□□□□ -1.97
VPS29-205ENST00000548539 ECSITQ9BQ95 431 aa2.73□□□□□ -1.97
VPS29-205ENST00000548539 RACGAP1Q9H0H5 632 aa2.73□□□□□ -1.97
VPS29-205ENST00000548539 NEUROG2Q9H2A3 272 aa2.73□□□□□ -1.97
VPS29-205ENST00000548539 CDC42EP4Q9H3Q1 356 aaKnown RBP2.73□□□□□ -1.97
VPS29-205ENST00000548539 ZNF226Q9NYT6 803 aa2.73□□□□□ -1.97
VPS29-205ENST00000548539 MRPS18BQ9Y676 258 aaKnown RBP2.73□□□□□ -1.97
VPS29-205ENST00000548539 CROCCQ5TZA2 2017 aa2.73□□□□□ -1.97
VPS29-205ENST00000548539 NFASCO94856 1347 aa2.72□□□□□ -1.97
VPS29-205ENST00000548539 TRBV6-6A0A0A6YYG2 114 aa2.72□□□□□ -1.97
VPS29-205ENST00000548539 XKRYO14609 159 aa2.72□□□□□ -1.97
VPS29-205ENST00000548539 CD5LO43866 347 aa2.72□□□□□ -1.97
VPS29-205ENST00000548539 DPM1O60762 260 aa2.72□□□□□ -1.97
VPS29-205ENST00000548539 CA11O75493 328 aa2.72□□□□□ -1.97
VPS29-205ENST00000548539 UTS2O95399 124 aa2.72□□□□□ -1.97
VPS29-205ENST00000548539 AIFM1O95831 613 aa2.72□□□□□ -1.97
VPS29-205ENST00000548539 SERPINA5P05154 406 aa2.72□□□□□ -1.97
VPS29-205ENST00000548539 PCCAP05165 728 aaPredicted RBP2.72□□□□□ -1.97
VPS29-205ENST00000548539 ACSM4P0C7M7 580 aa2.72□□□□□ -1.97
VPS29-205ENST00000548539 PNMA6AP0CW24 399 aaPredicted RBP2.72□□□□□ -1.97
VPS29-205ENST00000548539 NR2C1P13056 603 aa2.72□□□□□ -1.97
VPS29-205ENST00000548539 DCKP27707 260 aa2.72□□□□□ -1.97
VPS29-205ENST00000548539 GTF2E2P29084 291 aaKnown RBP2.72□□□□□ -1.97
VPS29-205ENST00000548539 RRM2P31350 389 aa2.72□□□□□ -1.97
VPS29-205ENST00000548539 AQP2P41181 271 aa2.72□□□□□ -1.97
VPS29-205ENST00000548539 CXCL5P42830 114 aa2.72□□□□□ -1.97
VPS29-205ENST00000548539 NMUP48645 174 aa2.72□□□□□ -1.97
VPS29-205ENST00000548539 MERTKQ12866 999 aa2.72□□□□□ -1.97
VPS29-205ENST00000548539 MPPED2Q15777 294 aa2.72□□□□□ -1.97
VPS29-205ENST00000548539 TMEM183BQ1AE95 376 aa2.72□□□□□ -1.97
VPS29-205ENST00000548539 RSPO1Q2MKA7 263 aaPredicted RBP2.72□□□□□ -1.97
VPS29-205ENST00000548539 ZNF658BQ4V348 819 aaPredicted RBP2.72□□□□□ -1.97
VPS29-205ENST00000548539 COA6Q5JTJ3 125 aaKnown RBP2.72□□□□□ -1.97
VPS29-205ENST00000548539 C1orf185Q5T7R7 199 aa2.72□□□□□ -1.97
VPS29-205ENST00000548539 REEP3Q6NUK4 255 aa2.72□□□□□ -1.97
VPS29-205ENST00000548539 CAMK2N1Q7Z7J9 78 aa2.72□□□□□ -1.97
VPS29-205ENST00000548539 LUZP2Q86TE4 346 aa2.72□□□□□ -1.97
VPS29-205ENST00000548539 TMEM183AQ8IXX5 376 aa2.72□□□□□ -1.97
VPS29-205ENST00000548539 MREGQ8N565 214 aa2.72□□□□□ -1.97
VPS29-205ENST00000548539 OR52K2Q8NGK3 314 aa2.72□□□□□ -1.97
VPS29-205ENST00000548539 OR10R2Q8NGX6 335 aa2.72□□□□□ -1.97
VPS29-205ENST00000548539 ACTRT1Q8TDG2 376 aa2.72□□□□□ -1.97
VPS29-205ENST00000548539 CAPSLQ8WWF8 208 aa2.72□□□□□ -1.97
VPS29-205ENST00000548539 PIK3IP1Q96FE7 263 aa2.72□□□□□ -1.97
VPS29-205ENST00000548539 P2RX4Q99571 388 aa2.72□□□□□ -1.97
VPS29-205ENST00000548539 BPIFA3Q9BQP9 254 aa2.72□□□□□ -1.97
VPS29-205ENST00000548539 C11orf70Q9BRQ4 267 aa2.72□□□□□ -1.97
VPS29-205ENST00000548539 GEMIN7Q9H840 131 aaKnown RBP2.72□□□□□ -1.97
VPS29-205ENST00000548539 TMED5Q9Y3A6 229 aa2.72□□□□□ -1.97
VPS29-205ENST00000548539 GOLT1BQ9Y3E0 138 aa2.72□□□□□ -1.97
VPS29-205ENST00000548539 ZNF318Q5VUA4 2279 aa2.72□□□□□ -1.97
VPS29-205ENST00000548539 A0A0B4J2A0 478 aa2.71□□□□□ -1.98
VPS29-205ENST00000548539 TRBV11-1A0A0K0K1C0 115 aa2.71□□□□□ -1.98
VPS29-205ENST00000548539 GLYATL1P3A0A0U1RQE8 302 aa2.71□□□□□ -1.98
VPS29-205ENST00000548539 C11orf94C9JXX5 98 aa2.71□□□□□ -1.98
VPS29-205ENST00000548539 SPECC1L-ADORA2AF8WAN1 911 aa2.71□□□□□ -1.98
VPS29-205ENST00000548539 WRBO00258 174 aa2.71□□□□□ -1.98
VPS29-205ENST00000548539 LAD1O00515 517 aa2.71□□□□□ -1.98
VPS29-205ENST00000548539 SLC25A27O95847 323 aa2.71□□□□□ -1.98
VPS29-205ENST00000548539 IGLV2-23P01705 113 aa2.71□□□□□ -1.98
VPS29-205ENST00000548539 KRT6AP02538 564 aa2.71□□□□□ -1.98
VPS29-205ENST00000548539 FGF4P08620 206 aa2.71□□□□□ -1.98
VPS29-205ENST00000548539 PSG2P11465 335 aa2.71□□□□□ -1.98
VPS29-205ENST00000548539 ANXA8P13928 327 aa2.71□□□□□ -1.98
VPS29-205ENST00000548539 EIF2S2P20042 333 aaKnown RBP2.71□□□□□ -1.98
VPS29-205ENST00000548539 HRH1P35367 487 aa2.71□□□□□ -1.98
VPS29-205ENST00000548539 RAB10P61026 200 aa2.71□□□□□ -1.98
VPS29-205ENST00000548539 SLC25A11Q02978 314 aaKnown RBP2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms