RNA–Protein interactions for RNA: ENST00000548420.1

PTCH1-217, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-217ENST00000548420 PFN4Q8NHR9 129 aa12.04□□□□□ -0.48
PTCH1-217ENST00000548420 TMEM186Q96B77 213 aa12.04□□□□□ -0.48
PTCH1-217ENST00000548420 ZNF837Q96EG3 531 aaPredicted RBP12.04□□□□□ -0.48
PTCH1-217ENST00000548420 HSH2DQ96JZ2 352 aa12.04□□□□□ -0.48
PTCH1-217ENST00000548420 C7orf34Q96L11 122 aa12.04□□□□□ -0.48
PTCH1-217ENST00000548420 DUX5Q96PT3 197 aa12.04□□□□□ -0.48
PTCH1-217ENST00000548420 ALKBH3Q96Q83 286 aaPredicted RBP12.04□□□□□ -0.48
PTCH1-217ENST00000548420 CDRT15Q96T59 188 aa12.04□□□□□ -0.48
PTCH1-217ENST00000548420 EMC6Q9BV81 110 aa12.04□□□□□ -0.48
PTCH1-217ENST00000548420 NELFAQ9H3P2 528 aa12.04□□□□□ -0.48
PTCH1-217ENST00000548420 GPR35Q9HC97 309 aa12.04□□□□□ -0.48
PTCH1-217ENST00000548420 OBP2BQ9NPH6 170 aa12.04□□□□□ -0.48
PTCH1-217ENST00000548420 C20orf141Q9NUB4 165 aa12.04□□□□□ -0.48
PTCH1-217ENST00000548420 ADA2Q9NZK5 511 aa12.04□□□□□ -0.48
PTCH1-217ENST00000548420 EGFL7Q9UHF1 273 aa12.04□□□□□ -0.48
PTCH1-217ENST00000548420 FKBP7Q9Y680 259 aa12.04□□□□□ -0.48
PTCH1-217ENST00000548420 ARPC4-TTLL3A0A0A6YYG9 625 aa12.03□□□□□ -0.48
PTCH1-217ENST00000548420 A0A1W2PR80 420 aa12.03□□□□□ -0.48
PTCH1-217ENST00000548420 J3KTA2 159 aa12.03□□□□□ -0.48
PTCH1-217ENST00000548420 KPNA4O00629 521 aaPredicted RBP12.03□□□□□ -0.48
PTCH1-217ENST00000548420 KRT33AO76009 404 aa12.03□□□□□ -0.48
PTCH1-217ENST00000548420 OR7A10O76100 309 aa12.03□□□□□ -0.48
PTCH1-217ENST00000548420 ZNF682O95780 498 aa12.03□□□□□ -0.48
PTCH1-217ENST00000548420 FUT1P19526 365 aa12.03□□□□□ -0.48
PTCH1-217ENST00000548420 MDKP21741 143 aaPredicted RBP12.03□□□□□ -0.48
PTCH1-217ENST00000548420 AHCYP23526 432 aa12.03□□□□□ -0.48
PTCH1-217ENST00000548420 CD40P25942 277 aa12.03□□□□□ -0.48
PTCH1-217ENST00000548420 MNAT1P51948 309 aa12.03□□□□□ -0.48
PTCH1-217ENST00000548420 PRPS1P60891 318 aa12.03□□□□□ -0.48
PTCH1-217ENST00000548420 POU3F1Q03052 451 aaPredicted RBP12.03□□□□□ -0.48
PTCH1-217ENST00000548420 CHRNB3Q05901 458 aa12.03□□□□□ -0.48
PTCH1-217ENST00000548420 SAMD4BQ5PRF9 694 aaKnown RBP12.03□□□□□ -0.48
PTCH1-217ENST00000548420 ANKRD16Q6P6B7 361 aa12.03□□□□□ -0.48
PTCH1-217ENST00000548420 ZNF627Q7L945 461 aa12.03□□□□□ -0.48
PTCH1-217ENST00000548420 RNF148Q8N7C7 305 aa12.03□□□□□ -0.48
PTCH1-217ENST00000548420 FAM169BQ8N8A8 192 aa12.03□□□□□ -0.48
PTCH1-217ENST00000548420 OR6X1Q8NH79 312 aa12.03□□□□□ -0.48
PTCH1-217ENST00000548420 FAM162AQ96A26 154 aa12.03□□□□□ -0.48
PTCH1-217ENST00000548420 SGTBQ96EQ0 304 aa12.03□□□□□ -0.48
PTCH1-217ENST00000548420 LPAR2Q9HBW0 351 aa12.03□□□□□ -0.48
PTCH1-217ENST00000548420 DDX28Q9NUL7 540 aaKnown RBP12.03□□□□□ -0.48
PTCH1-217ENST00000548420 RPS6KA6Q9UK32 745 aa12.03□□□□□ -0.48
PTCH1-217ENST00000548420 MGAT4BQ9UQ53 548 aa12.03□□□□□ -0.48
PTCH1-217ENST00000548420 MED31Q9Y3C7 131 aa12.03□□□□□ -0.48
PTCH1-217ENST00000548420 ENPP4Q9Y6X5 453 aa12.03□□□□□ -0.48
PTCH1-217ENST00000548420 SACSQ9NZJ4 4579 aa12.03□□□□□ -0.48
PTCH1-217ENST00000548420 TENM2Q9NT68 2774 aa12.02□□□□□ -0.48
PTCH1-217ENST00000548420 B4DSR2 109 aa12.02□□□□□ -0.49
PTCH1-217ENST00000548420 C3orf80F5H4A9 247 aa12.02□□□□□ -0.49
PTCH1-217ENST00000548420 HIST1H2ABP04908 130 aa12.02□□□□□ -0.49
PTCH1-217ENST00000548420 T-ENOLP0DO92 83 aa12.02□□□□□ -0.49
PTCH1-217ENST00000548420 IFNGR1P15260 489 aa12.02□□□□□ -0.49
PTCH1-217ENST00000548420 IFNA8P32881 189 aa12.02□□□□□ -0.49
PTCH1-217ENST00000548420 YAP1P46937 504 aaKnown RBP12.02□□□□□ -0.49
PTCH1-217ENST00000548420 IL13RA1P78552 427 aa12.02□□□□□ -0.49
PTCH1-217ENST00000548420 ARF1P84077 181 aaKnown RBP12.02□□□□□ -0.49
PTCH1-217ENST00000548420 IL1RL1Q01638 556 aa12.02□□□□□ -0.49
PTCH1-217ENST00000548420 TRAM2Q15035 370 aa12.02□□□□□ -0.49
PTCH1-217ENST00000548420 BEAN1Q3B7T3 259 aa12.02□□□□□ -0.49
PTCH1-217ENST00000548420 C3orf36Q3SXR2 165 aa12.02□□□□□ -0.49
PTCH1-217ENST00000548420 TBRG1Q3YBR2 411 aa12.02□□□□□ -0.49
PTCH1-217ENST00000548420 HIKESHIQ53FT3 197 aa12.02□□□□□ -0.49
PTCH1-217ENST00000548420 KLHL17Q6TDP4 642 aa12.02□□□□□ -0.49
PTCH1-217ENST00000548420 C16orf89Q6UX73 402 aa12.02□□□□□ -0.49
PTCH1-217ENST00000548420 TMEM108Q6UXF1 575 aa12.02□□□□□ -0.49
PTCH1-217ENST00000548420 FKBP9P1Q75LS8 142 aa12.02□□□□□ -0.49
PTCH1-217ENST00000548420 SLC35D2Q76EJ3 337 aa12.02□□□□□ -0.49
PTCH1-217ENST00000548420 HIST3H2AQ7L7L0 130 aa12.02□□□□□ -0.49
PTCH1-217ENST00000548420 RNF113BQ8IZP6 322 aaKnown RBP12.02□□□□□ -0.49
PTCH1-217ENST00000548420 GPR137CQ8N3F9 429 aa12.02□□□□□ -0.49
PTCH1-217ENST00000548420 CCDC197Q8NCU1 140 aa12.02□□□□□ -0.49
PTCH1-217ENST00000548420 FAM156AQ8NDB6 213 aa12.02□□□□□ -0.49
PTCH1-217ENST00000548420 HIST1H2ACQ93077 130 aa12.02□□□□□ -0.49
PTCH1-217ENST00000548420 TMEM54Q969K7 222 aa12.02□□□□□ -0.49
PTCH1-217ENST00000548420 NSL1Q96IY1 281 aa12.02□□□□□ -0.49
PTCH1-217ENST00000548420 C1orf147Q96MC9 270 aaPredicted RBP12.02□□□□□ -0.49
PTCH1-217ENST00000548420 ANKRD19PQ9H560 264 aa12.02□□□□□ -0.49
PTCH1-217ENST00000548420 CRLF2Q9HC73 371 aa12.02□□□□□ -0.49
PTCH1-217ENST00000548420 MYOZ1Q9NP98 299 aaPredicted RBP12.02□□□□□ -0.49
PTCH1-217ENST00000548420 NDE1Q9NXR1 346 aa12.02□□□□□ -0.49
PTCH1-217ENST00000548420 NDUFAF4Q9P032 175 aa12.02□□□□□ -0.49
PTCH1-217ENST00000548420 CRNNQ9UBG3 495 aaPredicted RBP12.02□□□□□ -0.49
PTCH1-217ENST00000548420 WNK2Q9Y3S1 2297 aa12.01□□□□□ -0.49
PTCH1-217ENST00000548420 A0A087WUU8 490 aa12.01□□□□□ -0.49
PTCH1-217ENST00000548420 ZNF726A6NNF4 738 aa12.01□□□□□ -0.49
PTCH1-217ENST00000548420 ZNF99A8MXY4 864 aaPredicted RBP12.01□□□□□ -0.49
PTCH1-217ENST00000548420 C11orf98E9PRG8 122 aa12.01□□□□□ -0.49
PTCH1-217ENST00000548420 BLOC1S5-TXNDC5H3BN57 136 aa12.01□□□□□ -0.49
PTCH1-217ENST00000548420 RNF13O43567 381 aa12.01□□□□□ -0.49
PTCH1-217ENST00000548420 OR6A2O95222 327 aa12.01□□□□□ -0.49
PTCH1-217ENST00000548420 WNT11O96014 354 aa12.01□□□□□ -0.49
PTCH1-217ENST00000548420 SEMG1P04279 462 aa12.01□□□□□ -0.49
PTCH1-217ENST00000548420 BMP4P12644 408 aa12.01□□□□□ -0.49
PTCH1-217ENST00000548420 CDH2P19022 906 aaPredicted RBP12.01□□□□□ -0.49
PTCH1-217ENST00000548420 ZNF83P51522 516 aa12.01□□□□□ -0.49
PTCH1-217ENST00000548420 PRKCDQ05655 676 aa12.01□□□□□ -0.49
PTCH1-217ENST00000548420 RPL18Q07020 188 aaKnown RBP12.01□□□□□ -0.49
PTCH1-217ENST00000548420 CAMK2DQ13557 499 aa12.01□□□□□ -0.49
PTCH1-217ENST00000548420 FHL1Q13642 323 aa12.01□□□□□ -0.49
PTCH1-217ENST00000548420 HIST3H3Q16695 136 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms