RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 ALKBH6Q3KRA9 238 aa11.44□□□□□ -0.58
CPSF6-204ENST00000547486 CYBRD1Q53TN4 286 aa11.44□□□□□ -0.58
CPSF6-204ENST00000547486 YIPF5Q969M3 257 aa11.44□□□□□ -0.58
CPSF6-204ENST00000547486 C1orf159Q96HA4 380 aa11.44□□□□□ -0.58
CPSF6-204ENST00000547486 TSPAN32Q96QS1 320 aa11.44□□□□□ -0.58
CPSF6-204ENST00000547486 OR51B6Q9H340 312 aa11.44□□□□□ -0.58
CPSF6-204ENST00000547486 RNF121Q9H920 327 aa11.44□□□□□ -0.58
CPSF6-204ENST00000547486 INIPQ9NRY2 104 aa11.44□□□□□ -0.58
CPSF6-204ENST00000547486 UGT2A1Q9Y4X1 527 aa11.44□□□□□ -0.58
CPSF6-204ENST00000547486 IGKV1D-43A0A0B4J1Z2 117 aa11.43□□□□□ -0.58
CPSF6-204ENST00000547486 A0A1W2PRG6 482 aa11.43□□□□□ -0.58
CPSF6-204ENST00000547486 BBIP1A8MTZ0 92 aa11.43□□□□□ -0.58
CPSF6-204ENST00000547486 PIP5K1CO60331 668 aa11.43□□□□□ -0.58
CPSF6-204ENST00000547486 NCR1O76036 304 aa11.43□□□□□ -0.58
CPSF6-204ENST00000547486 FARS2O95363 451 aaKnown RBP11.43□□□□□ -0.58
CPSF6-204ENST00000547486 SLC2A10O95528 541 aa11.43□□□□□ -0.58
CPSF6-204ENST00000547486 IGF2P01344 180 aa11.43□□□□□ -0.58
CPSF6-204ENST00000547486 MMP7P09237 267 aaPredicted RBP11.43□□□□□ -0.58
CPSF6-204ENST00000547486 TROVE2P10155 538 aaKnown RBP eCLIP11.43□□□□□ -0.58
CPSF6-204ENST00000547486 CDAP32320 146 aa11.43□□□□□ -0.58
CPSF6-204ENST00000547486 ZNF133P52736 654 aaPredicted RBP11.43□□□□□ -0.58
CPSF6-204ENST00000547486 RPS23P62266 143 aaKnown RBP11.43□□□□□ -0.58
CPSF6-204ENST00000547486 CCNIQ14094 377 aa11.43□□□□□ -0.58
CPSF6-204ENST00000547486 TMEM53Q6P2H8 277 aa11.43□□□□□ -0.58
CPSF6-204ENST00000547486 ERICH5Q6P6B1 374 aa11.43□□□□□ -0.58
CPSF6-204ENST00000547486 SLC16A14Q7RTX9 510 aa11.43□□□□□ -0.58
CPSF6-204ENST00000547486 MEX3DQ86XN8 651 aaKnown RBP11.43□□□□□ -0.58
CPSF6-204ENST00000547486 LRRC18Q8N456 261 aa11.43□□□□□ -0.58
CPSF6-204ENST00000547486 LINC01356Q8N9X3 169 aa11.43□□□□□ -0.58
CPSF6-204ENST00000547486 CPEB3Q8NE35 698 aaKnown RBP11.43□□□□□ -0.58
CPSF6-204ENST00000547486 NOXO1Q8NFA2 376 aa11.43□□□□□ -0.58
CPSF6-204ENST00000547486 HDAC2Q92769 488 aaKnown RBP11.43□□□□□ -0.58
CPSF6-204ENST00000547486 NMD3Q96D46 503 aaKnown RBP11.43□□□□□ -0.58
CPSF6-204ENST00000547486 TPD52L3Q96J77 140 aa11.43□□□□□ -0.58
CPSF6-204ENST00000547486 POLR2J2Q9GZM3 115 aaKnown RBP11.43□□□□□ -0.58
CPSF6-204ENST00000547486 POLR2J3Q9H1A7 115 aaKnown RBP11.43□□□□□ -0.58
CPSF6-204ENST00000547486 ZNF446Q9NWS9 450 aa11.43□□□□□ -0.58
CPSF6-204ENST00000547486 CMTM6Q9NX76 183 aa11.43□□□□□ -0.58
CPSF6-204ENST00000547486 ARMCX1Q9P291 453 aa11.43□□□□□ -0.58
CPSF6-204ENST00000547486 A4GNTQ9UNA3 340 aa11.43□□□□□ -0.58
CPSF6-204ENST00000547486 SNX13Q9Y5W8 968 aa11.43□□□□□ -0.58
CPSF6-204ENST00000547486 STAB1Q9NY15 2570 aa11.43□□□□□ -0.58
CPSF6-204ENST00000547486 A0A1W2PPW3 197 aa11.42□□□□□ -0.58
CPSF6-204ENST00000547486 FAM220BPB1ANY3 271 aa11.42□□□□□ -0.58
CPSF6-204ENST00000547486 CENPBD1B2RD01 187 aa11.42□□□□□ -0.58
CPSF6-204ENST00000547486 MCIDASD6RGH6 385 aa11.42□□□□□ -0.58
CPSF6-204ENST00000547486 IFNA14P01570 189 aa11.42□□□□□ -0.58
CPSF6-204ENST00000547486 VIMP08670 466 aaKnown RBP11.42□□□□□ -0.58
CPSF6-204ENST00000547486 THRBP10828 461 aa11.42□□□□□ -0.58
CPSF6-204ENST00000547486 ZNF250P15622 560 aa11.42□□□□□ -0.58
CPSF6-204ENST00000547486 MAGEB1P43366 347 aa11.42□□□□□ -0.58
CPSF6-204ENST00000547486 YAP1P46937 504 aaKnown RBP11.42□□□□□ -0.58
CPSF6-204ENST00000547486 ZNF84P51523 738 aa11.42□□□□□ -0.58
CPSF6-204ENST00000547486 CDH15P55291 814 aa11.42□□□□□ -0.58
CPSF6-204ENST00000547486 UCP2P55851 309 aa11.42□□□□□ -0.58
CPSF6-204ENST00000547486 SELENOWP63302 87 aa11.42□□□□□ -0.58
CPSF6-204ENST00000547486 FMODQ06828 376 aa11.42□□□□□ -0.58
CPSF6-204ENST00000547486 SLC36A2Q495M3 483 aa11.42□□□□□ -0.58
CPSF6-204ENST00000547486 NRN1LQ496H8 165 aa11.42□□□□□ -0.58
CPSF6-204ENST00000547486 LRRC23Q53EV4 343 aaPredicted RBP11.42□□□□□ -0.58
CPSF6-204ENST00000547486 C10orf128Q5T292 105 aa11.42□□□□□ -0.58
CPSF6-204ENST00000547486 RGS7BPQ6MZT1 257 aaPredicted RBP11.42□□□□□ -0.58
CPSF6-204ENST00000547486 MICU2Q8IYU8 434 aa11.42□□□□□ -0.58
CPSF6-204ENST00000547486 CLDN22Q8N7P3 220 aa11.42□□□□□ -0.58
CPSF6-204ENST00000547486 RBM15BQ8NDT2 890 aaKnown RBP11.42□□□□□ -0.58
CPSF6-204ENST00000547486 OR2T12Q8NG77 320 aa11.42□□□□□ -0.58
CPSF6-204ENST00000547486 RDH5Q92781 318 aa11.42□□□□□ -0.58
CPSF6-204ENST00000547486 NABP1Q96AH0 204 aa11.42□□□□□ -0.58
CPSF6-204ENST00000547486 RACGAP1Q9H0H5 632 aa11.42□□□□□ -0.58
CPSF6-204ENST00000547486 SIAEQ9HAT2 523 aa11.42□□□□□ -0.58
CPSF6-204ENST00000547486 ZNF275Q9NSD4 429 aaPredicted RBP11.42□□□□□ -0.58
CPSF6-204ENST00000547486 GID8Q9NWU2 228 aa11.42□□□□□ -0.58
CPSF6-204ENST00000547486 TAAR3PQ9P1P4 343 aa11.42□□□□□ -0.58
CPSF6-204ENST00000547486 TMEFF2Q9UIK5 374 aaPredicted RBP11.42□□□□□ -0.58
CPSF6-204ENST00000547486 MED31Q9Y3C7 131 aa11.42□□□□□ -0.58
CPSF6-204ENST00000547486 SLC22A23A1A5C7 686 aa11.41□□□□□ -0.58
CPSF6-204ENST00000547486 J3KTA2 159 aa11.41□□□□□ -0.58
CPSF6-204ENST00000547486 FFAR1O14842 300 aa11.41□□□□□ -0.58
CPSF6-204ENST00000547486 ENTPD5O75356 428 aa11.41□□□□□ -0.58
CPSF6-204ENST00000547486 SNAP29O95721 258 aa11.41□□□□□ -0.58
CPSF6-204ENST00000547486 LCKP06239 509 aa11.41□□□□□ -0.58
CPSF6-204ENST00000547486 MAKP20794 623 aa11.41□□□□□ -0.58
CPSF6-204ENST00000547486 LSP1P33241 339 aa11.41□□□□□ -0.58
CPSF6-204ENST00000547486 DAP3P51398 398 aaKnown RBP11.41□□□□□ -0.58
CPSF6-204ENST00000547486 MRPS34P82930 218 aaKnown RBP11.41□□□□□ -0.58
CPSF6-204ENST00000547486 GUCY1A3Q02108 690 aa11.41□□□□□ -0.58
CPSF6-204ENST00000547486 FHL1Q13642 323 aa11.41□□□□□ -0.58
CPSF6-204ENST00000547486 MAPRE2Q15555 327 aa11.41□□□□□ -0.58
CPSF6-204ENST00000547486 TBC1D28Q2M2D7 210 aa11.41□□□□□ -0.58
CPSF6-204ENST00000547486 PABPC1L2AQ5JQF8 200 aa11.41□□□□□ -0.58
CPSF6-204ENST00000547486 VTCN1Q7Z7D3 282 aa11.41□□□□□ -0.58
CPSF6-204ENST00000547486 DPPA2Q7Z7J5 298 aa11.41□□□□□ -0.58
CPSF6-204ENST00000547486 POU5F2Q8N7G0 328 aa11.41□□□□□ -0.58
CPSF6-204ENST00000547486 LRRC75AQ8NAA5 344 aa11.41□□□□□ -0.58
CPSF6-204ENST00000547486 PCYOX1LQ8NBM8 494 aa11.41□□□□□ -0.58
CPSF6-204ENST00000547486 CLDND2Q8NHS1 167 aa11.41□□□□□ -0.58
CPSF6-204ENST00000547486 ZNF519Q8TB69 540 aa11.41□□□□□ -0.58
CPSF6-204ENST00000547486 SYNPRQ8TBG9 265 aa11.41□□□□□ -0.58
CPSF6-204ENST00000547486 NSMAFQ92636 917 aa11.41□□□□□ -0.58
CPSF6-204ENST00000547486 GTF3AQ92664 365 aaKnown RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms