RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 APCDD1Q8J025 514 aa11.79□□□□□ -0.52
PTCH1-212ENST00000546744 C9orf62Q8N4C0 152 aa11.79□□□□□ -0.52
PTCH1-212ENST00000546744 ZNF439Q8NDP4 499 aa11.79□□□□□ -0.52
PTCH1-212ENST00000546744 OR51A4Q8NGJ6 313 aa11.79□□□□□ -0.52
PTCH1-212ENST00000546744 OR5AR1Q8NGP9 310 aa11.79□□□□□ -0.52
PTCH1-212ENST00000546744 BCL7CQ8WUZ0 217 aaPredicted RBP11.79□□□□□ -0.52
PTCH1-212ENST00000546744 KLK6Q92876 244 aa11.79□□□□□ -0.52
PTCH1-212ENST00000546744 DCTN6O00399 190 aa11.78□□□□□ -0.52
PTCH1-212ENST00000546744 PDGFBP01127 241 aaPredicted RBP11.78□□□□□ -0.52
PTCH1-212ENST00000546744 NME1P15531 152 aaKnown RBP11.78□□□□□ -0.52
PTCH1-212ENST00000546744 RPL12P30050 165 aaKnown RBP11.78□□□□□ -0.52
PTCH1-212ENST00000546744 RFC3P40938 356 aa11.78□□□□□ -0.52
PTCH1-212ENST00000546744 CTSOP43234 321 aaPredicted RBP11.78□□□□□ -0.52
PTCH1-212ENST00000546744 CRYBB2P43320 205 aa11.78□□□□□ -0.52
PTCH1-212ENST00000546744 MAP2K6P52564 334 aa11.78□□□□□ -0.52
PTCH1-212ENST00000546744 SELENOVP59797 346 aa11.78□□□□□ -0.52
PTCH1-212ENST00000546744 HNF4GQ14541 408 aa11.78□□□□□ -0.52
PTCH1-212ENST00000546744 ADIRFQ15847 76 aa11.78□□□□□ -0.52
PTCH1-212ENST00000546744 GLYATL3Q5SZD4 288 aa11.78□□□□□ -0.52
PTCH1-212ENST00000546744 C6orf132Q5T0Z8 1188 aa11.78□□□□□ -0.52
PTCH1-212ENST00000546744 PRSS45Q7RTY3 260 aa11.78□□□□□ -0.52
PTCH1-212ENST00000546744 MKXQ8IYA7 352 aa11.78□□□□□ -0.52
PTCH1-212ENST00000546744 SCMH1Q96GD3 660 aa11.78□□□□□ -0.52
PTCH1-212ENST00000546744 SENP5Q96HI0 755 aaPredicted RBP11.78□□□□□ -0.52
PTCH1-212ENST00000546744 TNFRSF13CQ96RJ3 184 aa11.78□□□□□ -0.52
PTCH1-212ENST00000546744 ZNF426Q9BUY5 554 aa11.78□□□□□ -0.52
PTCH1-212ENST00000546744 ELF5Q9UKW6 265 aaPredicted RBP11.78□□□□□ -0.52
PTCH1-212ENST00000546744 MCRIP1C9JLW8 97 aa11.78□□□□□ -0.52
PTCH1-212ENST00000546744 BRINP1O60477 761 aa11.78□□□□□ -0.52
PTCH1-212ENST00000546744 PNPP00491 289 aa11.78□□□□□ -0.52
PTCH1-212ENST00000546744 MT-ATP6P00846 226 aa11.78□□□□□ -0.52
PTCH1-212ENST00000546744 CTXN2P0C2S0 81 aa11.78□□□□□ -0.52
PTCH1-212ENST00000546744 ARSAP15289 507 aa11.78□□□□□ -0.52
PTCH1-212ENST00000546744 KITLGP21583 273 aa11.78□□□□□ -0.52
PTCH1-212ENST00000546744 DPP4P27487 766 aa11.78□□□□□ -0.52
PTCH1-212ENST00000546744 EGR3Q06889 387 aa11.78□□□□□ -0.52
PTCH1-212ENST00000546744 SLC17A1Q14916 467 aa11.78□□□□□ -0.52
PTCH1-212ENST00000546744 CD300LDQ6UXZ3 194 aa11.78□□□□□ -0.52
PTCH1-212ENST00000546744 RELL2Q8NC24 303 aaPredicted RBP11.78□□□□□ -0.52
PTCH1-212ENST00000546744 PPP1R1CQ8WVI7 109 aa11.78□□□□□ -0.52
PTCH1-212ENST00000546744 HGDQ93099 445 aa11.78□□□□□ -0.52
PTCH1-212ENST00000546744 FBXW5Q969U6 566 aa11.78□□□□□ -0.52
PTCH1-212ENST00000546744 WDR89Q96FK6 387 aaPredicted RBP11.78□□□□□ -0.52
PTCH1-212ENST00000546744 TEX101Q9BY14 249 aa11.78□□□□□ -0.52
PTCH1-212ENST00000546744 GABRQQ9UN88 632 aa11.78□□□□□ -0.52
PTCH1-212ENST00000546744 PAPPA2Q9BXP8 1791 aa11.78□□□□□ -0.52
PTCH1-212ENST00000546744 FAM171A2A8MVW0 826 aa11.78□□□□□ -0.52
PTCH1-212ENST00000546744 CST4P01036 141 aa11.78□□□□□ -0.52
PTCH1-212ENST00000546744 IGHG1P01857 330 aa11.78□□□□□ -0.52
PTCH1-212ENST00000546744 KLK3P07288 261 aaPredicted RBP11.78□□□□□ -0.52
PTCH1-212ENST00000546744 GSTP1P09211 210 aaKnown RBP11.78□□□□□ -0.52
PTCH1-212ENST00000546744 AADACP22760 399 aa11.78□□□□□ -0.52
PTCH1-212ENST00000546744 GSG1Q2KHT4 349 aa11.78□□□□□ -0.52
PTCH1-212ENST00000546744 OR2T2Q6IF00 324 aa11.78□□□□□ -0.52
PTCH1-212ENST00000546744 PAQR9Q6ZVX9 377 aa11.78□□□□□ -0.52
PTCH1-212ENST00000546744 FBXL6Q8N531 539 aa11.78□□□□□ -0.52
PTCH1-212ENST00000546744 SFT2D1Q8WV19 159 aa11.78□□□□□ -0.52
PTCH1-212ENST00000546744 SCLYQ96I15 445 aa11.78□□□□□ -0.52
PTCH1-212ENST00000546744 CXorf58Q96LI9 332 aa11.78□□□□□ -0.52
PTCH1-212ENST00000546744 TMPRSS13Q9BYE2 586 aa11.78□□□□□ -0.52
PTCH1-212ENST00000546744 NXF2Q9GZY0 626 aaKnown RBP11.78□□□□□ -0.52
PTCH1-212ENST00000546744 RYDENQ9NUL5 291 aaKnown RBP11.78□□□□□ -0.52
PTCH1-212ENST00000546744 NECAP2Q9NVZ3 263 aa11.78□□□□□ -0.52
PTCH1-212ENST00000546744 FAM96BQ9Y3D0 163 aa11.78□□□□□ -0.52
PTCH1-212ENST00000546744 CHST2Q9Y4C5 530 aa11.78□□□□□ -0.52
PTCH1-212ENST00000546744 WNT6Q9Y6F9 365 aa11.78□□□□□ -0.52
PTCH1-212ENST00000546744 GOLGB1Q14789 3259 aaKnown RBP11.78□□□□□ -0.52
PTCH1-212ENST00000546744 M0QYG6 137 aa11.77□□□□□ -0.52
PTCH1-212ENST00000546744 SYNGR4O95473 234 aa11.77□□□□□ -0.52
PTCH1-212ENST00000546744 ZNF865P0CJ78 1059 aaPredicted RBP11.77□□□□□ -0.52
PTCH1-212ENST00000546744 TYRP1P17643 537 aa11.77□□□□□ -0.52
PTCH1-212ENST00000546744 TGFBR1P36897 503 aa11.77□□□□□ -0.52
PTCH1-212ENST00000546744 PCBD1P61457 104 aa11.77□□□□□ -0.52
PTCH1-212ENST00000546744 ATPAF1Q5TC12 328 aaPredicted RBP11.77□□□□□ -0.52
PTCH1-212ENST00000546744 OVCH2Q7RTZ1 564 aa11.77□□□□□ -0.52
PTCH1-212ENST00000546744 LRRTM3Q86VH5 581 aa11.77□□□□□ -0.52
PTCH1-212ENST00000546744 MFSD9Q8NBP5 474 aa11.77□□□□□ -0.52
PTCH1-212ENST00000546744 CLEC1AQ8NC01 280 aa11.77□□□□□ -0.52
PTCH1-212ENST00000546744 TM4SF18Q96CE8 201 aa11.77□□□□□ -0.52
PTCH1-212ENST00000546744 HHIPL1Q96JK4 782 aa11.77□□□□□ -0.52
PTCH1-212ENST00000546744 SLC6A18Q96N87 628 aa11.77□□□□□ -0.52
PTCH1-212ENST00000546744 CACFD1Q9UGQ2 172 aa11.77□□□□□ -0.52
PTCH1-212ENST00000546744 MSRAQ9UJ68 235 aa11.77□□□□□ -0.52
PTCH1-212ENST00000546744 A0A1B0GWA3 101 aa11.77□□□□□ -0.53
PTCH1-212ENST00000546744 FAM221BA6H8Z2 402 aa11.77□□□□□ -0.53
PTCH1-212ENST00000546744 OR13C7P0DN81 318 aa11.77□□□□□ -0.53
PTCH1-212ENST00000546744 FCGR2CP31995 323 aa11.77□□□□□ -0.53
PTCH1-212ENST00000546744 ZNF93P35789 620 aaPredicted RBP11.77□□□□□ -0.53
PTCH1-212ENST00000546744 SCGB2A2Q13296 93 aa11.77□□□□□ -0.53
PTCH1-212ENST00000546744 TOMM34Q15785 309 aaPredicted RBP11.77□□□□□ -0.53
PTCH1-212ENST00000546744 PHYHD1Q5SRE7 291 aa11.77□□□□□ -0.53
PTCH1-212ENST00000546744 ADIPOR2Q86V24 386 aa11.77□□□□□ -0.53
PTCH1-212ENST00000546744 OR5M9Q8NGP3 310 aa11.77□□□□□ -0.53
PTCH1-212ENST00000546744 LILRB1Q8NHL6 650 aaPredicted RBP11.77□□□□□ -0.53
PTCH1-212ENST00000546744 ZFPM2Q8WW38 1151 aa11.77□□□□□ -0.53
PTCH1-212ENST00000546744 DICER1Q9UPY3 1922 aaKnown RBP11.77□□□□□ -0.53
PTCH1-212ENST00000546744 DSCR3O14972 297 aa11.77□□□□□ -0.53
PTCH1-212ENST00000546744 GSTZ1O43708 216 aaPredicted RBP11.77□□□□□ -0.53
PTCH1-212ENST00000546744 AIFM1O95831 613 aa11.77□□□□□ -0.53
PTCH1-212ENST00000546744 ABHD16AO95870 558 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms