RNA–Protein interactions for RNA: ENST00000546534.1

SCAF11-208, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 705 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-208ENST00000546534 MOGAT1Q96PD6 335 aa10.75□□□□□ -0.69
SCAF11-208ENST00000546534 CITED1Q99966 193 aa10.75□□□□□ -0.69
SCAF11-208ENST00000546534 RHOXF2Q9BQY4 288 aa10.75□□□□□ -0.69
SCAF11-208ENST00000546534 MRI1Q9BV20 369 aa10.75□□□□□ -0.69
SCAF11-208ENST00000546534 ASPNQ9BXN1 380 aa10.75□□□□□ -0.69
SCAF11-208ENST00000546534 RSPO3Q9BXY4 272 aaPredicted RBP10.75□□□□□ -0.69
SCAF11-208ENST00000546534 C1orf198Q9H425 327 aa10.75□□□□□ -0.69
SCAF11-208ENST00000546534 GLTPQ9NZD2 209 aa10.75□□□□□ -0.69
SCAF11-208ENST00000546534 ZSCAN5BA6NJL1 495 aa10.74□□□□□ -0.69
SCAF11-208ENST00000546534 M0QZ24 198 aa10.74□□□□□ -0.69
SCAF11-208ENST00000546534 PLPP3O14495 311 aa10.74□□□□□ -0.69
SCAF11-208ENST00000546534 RFXANKO14593 260 aa10.74□□□□□ -0.69
SCAF11-208ENST00000546534 ICMTO60725 284 aa10.74□□□□□ -0.69
SCAF11-208ENST00000546534 IGHV2-70P01814 119 aa10.74□□□□□ -0.69
SCAF11-208ENST00000546534 ALDOCP09972 364 aaKnown RBP10.74□□□□□ -0.69
SCAF11-208ENST00000546534 MYZAPP0CAP1 466 aa10.74□□□□□ -0.69
SCAF11-208ENST00000546534 AHCYP23526 432 aa10.74□□□□□ -0.69
SCAF11-208ENST00000546534 MPV17P39210 176 aa10.74□□□□□ -0.69
SCAF11-208ENST00000546534 SLC6A9P48067 706 aa10.74□□□□□ -0.69
SCAF11-208ENST00000546534 BIDP55957 195 aa10.74□□□□□ -0.69
SCAF11-208ENST00000546534 LRRC74AQ0VAA2 488 aa10.74□□□□□ -0.69
SCAF11-208ENST00000546534 ALG10BQ5I7T1 473 aa10.74□□□□□ -0.69
SCAF11-208ENST00000546534 TMEM53Q6P2H8 277 aa10.74□□□□□ -0.69
SCAF11-208ENST00000546534 LRFN4Q6PJG9 635 aa10.74□□□□□ -0.69
SCAF11-208ENST00000546534 C9orf139Q6ZV77 190 aa10.74□□□□□ -0.69
SCAF11-208ENST00000546534 PXKQ7Z7A4 578 aa10.74□□□□□ -0.69
SCAF11-208ENST00000546534 C1QL4Q86Z23 238 aa10.74□□□□□ -0.69
SCAF11-208ENST00000546534 LSMEM1Q8N8F7 131 aa10.74□□□□□ -0.69
SCAF11-208ENST00000546534 OR52E2Q8NGJ4 325 aa10.74□□□□□ -0.69
SCAF11-208ENST00000546534 OR1J2Q8NGS2 313 aa10.74□□□□□ -0.69
SCAF11-208ENST00000546534 DNAJA4Q8WW22 397 aaPredicted RBP10.74□□□□□ -0.69
SCAF11-208ENST00000546534 ANP32BQ92688 251 aaKnown RBP10.74□□□□□ -0.69
SCAF11-208ENST00000546534 DCLRE1CQ96SD1 692 aaKnown RBP10.74□□□□□ -0.69
SCAF11-208ENST00000546534 NUF2Q9BZD4 464 aa10.74□□□□□ -0.69
SCAF11-208ENST00000546534 PATZ1Q9HBE1 687 aaKnown RBP10.74□□□□□ -0.69
SCAF11-208ENST00000546534 BEX1Q9HBH7 125 aa10.74□□□□□ -0.69
SCAF11-208ENST00000546534 TMEM38BQ9NVV0 291 aa10.74□□□□□ -0.69
SCAF11-208ENST00000546534 MRPL39Q9NYK5 338 aaKnown RBP10.74□□□□□ -0.69
SCAF11-208ENST00000546534 GPR45Q9Y5Y3 372 aa10.74□□□□□ -0.69
SCAF11-208ENST00000546534 NPTNQ9Y639 398 aa10.74□□□□□ -0.69
SCAF11-208ENST00000546534 MDFIC2A0A1B0GVS7 189 aa10.73□□□□□ -0.69
SCAF11-208ENST00000546534 FAM181BA6NEQ2 426 aa10.73□□□□□ -0.69
SCAF11-208ENST00000546534 C11orf98E9PRG8 122 aa10.73□□□□□ -0.69
SCAF11-208ENST00000546534 DHHO43323 396 aa10.73□□□□□ -0.69
SCAF11-208ENST00000546534 HOXA3O43365 443 aaPredicted RBP10.73□□□□□ -0.69
SCAF11-208ENST00000546534 ENTPD5O75356 428 aa10.73□□□□□ -0.69
SCAF11-208ENST00000546534 FARS2O95363 451 aaKnown RBP10.73□□□□□ -0.69
SCAF11-208ENST00000546534 PTHP01270 115 aa10.73□□□□□ -0.69
SCAF11-208ENST00000546534 CD80P33681 288 aa10.73□□□□□ -0.69
SCAF11-208ENST00000546534 IDH3AP50213 366 aa10.73□□□□□ -0.69
SCAF11-208ENST00000546534 PDCD4Q53EL6 469 aaKnown RBP10.73□□□□□ -0.69
SCAF11-208ENST00000546534 FBLN7Q53RD9 439 aa10.73□□□□□ -0.69
SCAF11-208ENST00000546534 SPATA46Q5T0L3 261 aa10.73□□□□□ -0.69
SCAF11-208ENST00000546534 ULK3Q6PHR2 472 aa10.73□□□□□ -0.69
SCAF11-208ENST00000546534 COMTD1Q86VU5 262 aa10.73□□□□□ -0.69
SCAF11-208ENST00000546534 PARP8Q8N3A8 854 aa10.73□□□□□ -0.69
SCAF11-208ENST00000546534 CPEB3Q8NE35 698 aaKnown RBP10.73□□□□□ -0.69
SCAF11-208ENST00000546534 OR4K5Q8NGD3 323 aa10.73□□□□□ -0.69
SCAF11-208ENST00000546534 OR4F5Q8NH21 305 aa10.73□□□□□ -0.69
SCAF11-208ENST00000546534 IPCEF1Q8WWN9 437 aaPredicted RBP10.73□□□□□ -0.69
SCAF11-208ENST00000546534 GEMIN6Q8WXD5 167 aaKnown RBP10.73□□□□□ -0.69
SCAF11-208ENST00000546534 SLC47A1Q96FL8 570 aa10.73□□□□□ -0.69
SCAF11-208ENST00000546534 PKNOX2Q96KN3 472 aa10.73□□□□□ -0.69
SCAF11-208ENST00000546534 EPYCQ99645 322 aa10.73□□□□□ -0.69
SCAF11-208ENST00000546534 RBM4BQ9BQ04 359 aaKnown RBP10.73□□□□□ -0.69
SCAF11-208ENST00000546534 C20orf27Q9GZN8 174 aa10.73□□□□□ -0.69
SCAF11-208ENST00000546534 EGLN1Q9GZT9 426 aa10.73□□□□□ -0.69
SCAF11-208ENST00000546534 LRMDAQ9H2I8 198 aa10.73□□□□□ -0.69
SCAF11-208ENST00000546534 TPT1P8Q9HAU6 139 aa10.73□□□□□ -0.69
SCAF11-208ENST00000546534 BRD7Q9NPI1 651 aa10.73□□□□□ -0.69
SCAF11-208ENST00000546534 AIG1Q9NVV5 245 aa10.73□□□□□ -0.69
SCAF11-208ENST00000546534 RAP2CQ9Y3L5 183 aa10.73□□□□□ -0.69
SCAF11-208ENST00000546534 IQCMA0A1B0GVH7 501 aa10.72□□□□□ -0.69
SCAF11-208ENST00000546534 PLSCR5A0PG75 271 aa10.72□□□□□ -0.69
SCAF11-208ENST00000546534 TMEM247A6NEH6 219 aa10.72□□□□□ -0.69
SCAF11-208ENST00000546534 A8MXK9 166 aa10.72□□□□□ -0.69
SCAF11-208ENST00000546534 TIMM23O14925 209 aa10.72□□□□□ -0.69
SCAF11-208ENST00000546534 ALX3O95076 343 aa10.72□□□□□ -0.69
SCAF11-208ENST00000546534 PLATP00750 562 aa10.72□□□□□ -0.69
SCAF11-208ENST00000546534 ADH4P08319 380 aa10.72□□□□□ -0.69
SCAF11-208ENST00000546534 ETV4P43268 484 aa10.72□□□□□ -0.69
SCAF11-208ENST00000546534 RPL14P50914 215 aaKnown RBP10.72□□□□□ -0.69
SCAF11-208ENST00000546534 RAG2P55895 527 aa10.72□□□□□ -0.69
SCAF11-208ENST00000546534 KRTAP10-3P60369 221 aa10.72□□□□□ -0.69
SCAF11-208ENST00000546534 ABCE1P61221 599 aaKnown RBP10.72□□□□□ -0.69
SCAF11-208ENST00000546534 PLP2Q04941 152 aa10.72□□□□□ -0.69
SCAF11-208ENST00000546534 PAX8Q06710 450 aa10.72□□□□□ -0.69
SCAF11-208ENST00000546534 ZNF718Q3SXZ3 478 aa10.72□□□□□ -0.69
SCAF11-208ENST00000546534 SLC36A2Q495M3 483 aa10.72□□□□□ -0.69
SCAF11-208ENST00000546534 GTDC1Q4AE62 458 aa10.72□□□□□ -0.69
SCAF11-208ENST00000546534 ZNF362Q5T0B9 420 aaPredicted RBP10.72□□□□□ -0.69
SCAF11-208ENST00000546534 THEM4Q5T1C6 240 aa10.72□□□□□ -0.69
SCAF11-208ENST00000546534 OLFML2AQ68BL7 652 aa10.72□□□□□ -0.69
SCAF11-208ENST00000546534 ASPHD2Q6ICH7 369 aa10.72□□□□□ -0.69
SCAF11-208ENST00000546534 OGFOD2Q6N063 350 aa10.72□□□□□ -0.69
SCAF11-208ENST00000546534 SLC35D2Q76EJ3 337 aa10.72□□□□□ -0.69
SCAF11-208ENST00000546534 SLC16A14Q7RTX9 510 aa10.72□□□□□ -0.69
SCAF11-208ENST00000546534 DPPA2Q7Z7J5 298 aa10.72□□□□□ -0.69
SCAF11-208ENST00000546534 NUDCD3Q8IVD9 361 aa10.72□□□□□ -0.69
SCAF11-208ENST00000546534 ZNF101Q8IZC7 436 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms