RNA–Protein interactions for RNA: ENST00000546073.5

CD9-211, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-211ENST00000546073 ARPC3O15145 178 aa15.3■□□□□ 0.04
CD9-211ENST00000546073 KHDRBS3O75525 346 aaKnown RBP15.3■□□□□ 0.04
CD9-211ENST00000546073 SEC14L2O76054 403 aa15.3■□□□□ 0.04
CD9-211ENST00000546073 CBR1P16152 277 aa15.3■□□□□ 0.04
CD9-211ENST00000546073 ZNF23P17027 643 aa15.3■□□□□ 0.04
CD9-211ENST00000546073 POU1F1P28069 291 aa15.3■□□□□ 0.04
CD9-211ENST00000546073 ACTR3P61158 418 aa15.3■□□□□ 0.04
CD9-211ENST00000546073 BSPH1Q075Z2 132 aa15.3■□□□□ 0.04
CD9-211ENST00000546073 NPRL3Q12980 569 aa15.3■□□□□ 0.04
CD9-211ENST00000546073 ATP6AP1Q15904 470 aa15.3■□□□□ 0.04
CD9-211ENST00000546073 HIST3H3Q16695 136 aa15.3■□□□□ 0.04
CD9-211ENST00000546073 C3orf36Q3SXR2 165 aa15.3■□□□□ 0.04
CD9-211ENST00000546073 CLEC12AQ5QGZ9 265 aa15.3■□□□□ 0.04
CD9-211ENST00000546073 C10orf128Q5T292 105 aa15.3■□□□□ 0.04
CD9-211ENST00000546073 SHQ1Q6PI26 577 aaKnown RBP15.3■□□□□ 0.04
CD9-211ENST00000546073 LRFN4Q6PJG9 635 aa15.3■□□□□ 0.04
CD9-211ENST00000546073 C20orf204Q6ZNR8 217 aa15.3■□□□□ 0.04
CD9-211ENST00000546073 ZNF627Q7L945 461 aa15.3■□□□□ 0.04
CD9-211ENST00000546073 LINGO2Q7L985 606 aa15.3■□□□□ 0.04
CD9-211ENST00000546073 ALDH16A1Q8IZ83 802 aa15.3■□□□□ 0.04
CD9-211ENST00000546073 SVOPLQ8N434 492 aa15.3■□□□□ 0.04
CD9-211ENST00000546073 FAM169BQ8N8A8 192 aa15.3■□□□□ 0.04
CD9-211ENST00000546073 WDR31Q8NA23 367 aa15.3■□□□□ 0.04
CD9-211ENST00000546073 ZNF519Q8TB69 540 aa15.3■□□□□ 0.04
CD9-211ENST00000546073 DUS3LQ96G46 650 aaKnown RBP15.3■□□□□ 0.04
CD9-211ENST00000546073 PRRG3Q9BZD7 231 aa15.3■□□□□ 0.04
CD9-211ENST00000546073 C1orf198Q9H425 327 aa15.3■□□□□ 0.04
CD9-211ENST00000546073 SIAEQ9HAT2 523 aa15.3■□□□□ 0.04
CD9-211ENST00000546073 MPDZO75970 2070 aa15.29■□□□□ 0.04
CD9-211ENST00000546073 ASH1LQ9NR48 2969 aaKnown RBP15.29■□□□□ 0.04
CD9-211ENST00000546073 RIIAD1A6NNX1 92 aa15.29■□□□□ 0.04
CD9-211ENST00000546073 SLC16A7O60669 478 aa15.29■□□□□ 0.04
CD9-211ENST00000546073 BMP4P12644 408 aa15.29■□□□□ 0.04
CD9-211ENST00000546073 CD40P25942 277 aa15.29■□□□□ 0.04
CD9-211ENST00000546073 PTDSS1P48651 473 aaKnown RBP15.29■□□□□ 0.04
CD9-211ENST00000546073 RAB1AP62820 205 aa15.29■□□□□ 0.04
CD9-211ENST00000546073 MRPS34P82930 218 aaKnown RBP15.29■□□□□ 0.04
CD9-211ENST00000546073 GALK2Q01415 458 aa15.29■□□□□ 0.04
CD9-211ENST00000546073 HSF2Q03933 536 aa15.29■□□□□ 0.04
CD9-211ENST00000546073 RUNX1T1Q06455 604 aa15.29■□□□□ 0.04
CD9-211ENST00000546073 CCNIQ14094 377 aa15.29■□□□□ 0.04
CD9-211ENST00000546073 KPNB1Q14974 876 aaKnown RBP15.29■□□□□ 0.04
CD9-211ENST00000546073 LEG1Q6P5S2 330 aa15.29■□□□□ 0.04
CD9-211ENST00000546073 C22orf34Q6ZV56 151 aa15.29■□□□□ 0.04
CD9-211ENST00000546073 CDH24Q86UP0 819 aa15.29■□□□□ 0.04
CD9-211ENST00000546073 OR1J2Q8NGS2 313 aa15.29■□□□□ 0.04
CD9-211ENST00000546073 PIGTQ969N2 578 aa15.29■□□□□ 0.04
CD9-211ENST00000546073 PLEKHA8Q96JA3 519 aa15.29■□□□□ 0.04
CD9-211ENST00000546073 GPA33Q99795 319 aa15.29■□□□□ 0.04
CD9-211ENST00000546073 EGLN3Q9H6Z9 239 aa15.29■□□□□ 0.04
CD9-211ENST00000546073 IL20Q9NYY1 176 aa15.29■□□□□ 0.04
CD9-211ENST00000546073 KLHL21Q9UJP4 597 aa15.29■□□□□ 0.04
CD9-211ENST00000546073 ORC6Q9Y5N6 252 aa15.29■□□□□ 0.04
CD9-211ENST00000546073 ATP23Q9Y6H3 246 aa15.29■□□□□ 0.04
CD9-211ENST00000546073 SLC22A23A1A5C7 686 aa15.28■□□□□ 0.04
CD9-211ENST00000546073 C12orf71A8MTZ7 269 aa15.28■□□□□ 0.04
CD9-211ENST00000546073 SLC2A10O95528 541 aa15.28■□□□□ 0.04
CD9-211ENST00000546073 TXNDC12O95881 172 aa15.28■□□□□ 0.04
CD9-211ENST00000546073 PAICSP22234 425 aaKnown RBP15.28■□□□□ 0.04
CD9-211ENST00000546073 PIGFQ07326 219 aa15.28■□□□□ 0.04
CD9-211ENST00000546073 ZSCAN26Q16670 478 aa15.28■□□□□ 0.04
CD9-211ENST00000546073 UNQ6126/PRO20091Q6UXV3 157 aa15.28■□□□□ 0.04
CD9-211ENST00000546073 CD300LDQ6UXZ3 194 aa15.28■□□□□ 0.04
CD9-211ENST00000546073 LRRC18Q8N456 261 aa15.28■□□□□ 0.04
CD9-211ENST00000546073 OR10H5Q8NGA6 315 aa15.28■□□□□ 0.04
CD9-211ENST00000546073 AKAP1Q92667 903 aaKnown RBP eCLIP15.28■□□□□ 0.04
CD9-211ENST00000546073 FBXW5Q969U6 566 aa15.28■□□□□ 0.04
CD9-211ENST00000546073 SLCO4A1Q96BD0 722 aa15.28■□□□□ 0.04
CD9-211ENST00000546073 RASD2Q96D21 266 aa15.28■□□□□ 0.04
CD9-211ENST00000546073 ZNF837Q96EG3 531 aaPredicted RBP15.28■□□□□ 0.04
CD9-211ENST00000546073 WACQ9BTA9 647 aa15.28■□□□□ 0.04
CD9-211ENST00000546073 NELFAQ9H3P2 528 aa15.28■□□□□ 0.04
CD9-211ENST00000546073 POLR1DQ9Y2S0 133 aa15.28■□□□□ 0.04
CD9-211ENST00000546073 DPRXA6NFQ7 191 aa15.27■□□□□ 0.04
CD9-211ENST00000546073 H7C1C5 153 aa15.27■□□□□ 0.04
CD9-211ENST00000546073 HLA-HP01893 362 aa15.27■□□□□ 0.04
CD9-211ENST00000546073 HLA-DQA2P01906 255 aa15.27■□□□□ 0.04
CD9-211ENST00000546073 RAF1P04049 648 aa15.27■□□□□ 0.04
CD9-211ENST00000546073 HMGN1P05114 100 aa15.27■□□□□ 0.04
CD9-211ENST00000546073 ZNF3P17036 446 aa15.27■□□□□ 0.04
CD9-211ENST00000546073 MSR1P21757 451 aa15.27■□□□□ 0.04
CD9-211ENST00000546073 IDH3GP51553 393 aaPredicted RBP15.27■□□□□ 0.04
CD9-211ENST00000546073 IST1P53990 364 aa15.27■□□□□ 0.04
CD9-211ENST00000546073 CDH11P55287 796 aa15.27■□□□□ 0.04
CD9-211ENST00000546073 LCN6P62502 163 aa15.27■□□□□ 0.04
CD9-211ENST00000546073 TUBA1BP68363 451 aa15.27■□□□□ 0.04
CD9-211ENST00000546073 TUBA4AP68366 448 aa15.27■□□□□ 0.04
CD9-211ENST00000546073 FHL1Q13642 323 aa15.27■□□□□ 0.04
CD9-211ENST00000546073 SLC36A3Q495N2 470 aa15.27■□□□□ 0.04
CD9-211ENST00000546073 MESTQ5EB52 335 aa15.27■□□□□ 0.04
CD9-211ENST00000546073 SLC35F1Q5T1Q4 408 aa15.27■□□□□ 0.04
CD9-211ENST00000546073 ZNF770Q6IQ21 691 aaPredicted RBP15.27■□□□□ 0.04
CD9-211ENST00000546073 ADAM5Q6NVV9 412 aa15.27■□□□□ 0.04
CD9-211ENST00000546073 SLC27A4Q6P1M0 643 aa15.27■□□□□ 0.04
CD9-211ENST00000546073 SLC25A47Q6Q0C1 308 aa15.27■□□□□ 0.04
CD9-211ENST00000546073 THSD4Q6ZMP0 1018 aa15.27■□□□□ 0.04
CD9-211ENST00000546073 TUBA1AQ71U36 451 aa15.27■□□□□ 0.04
CD9-211ENST00000546073 FAM122BQ7Z309 247 aa15.27■□□□□ 0.04
CD9-211ENST00000546073 MDP1Q86V88 176 aa15.27■□□□□ 0.04
CD9-211ENST00000546073 GLB1L2Q8IW92 636 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms