RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 DOCK4Q8N1I0 1966 aa7.88□□□□□ -1.15
CLIP1-218ENST00000545889 LILRA5A6NI73 299 aa7.88□□□□□ -1.15
CLIP1-218ENST00000545889 ABCD4O14678 606 aa7.88□□□□□ -1.15
CLIP1-218ENST00000545889 CXCL13O43927 109 aa7.88□□□□□ -1.15
CLIP1-218ENST00000545889 FZD7O75084 574 aa7.88□□□□□ -1.15
CLIP1-218ENST00000545889 STSP08842 583 aa7.88□□□□□ -1.15
CLIP1-218ENST00000545889 NUDT7P0C024 238 aa7.88□□□□□ -1.15
CLIP1-218ENST00000545889 PTAFRP25105 342 aa7.88□□□□□ -1.15
CLIP1-218ENST00000545889 ELAVL4P26378 380 aaKnown RBP7.88□□□□□ -1.15
CLIP1-218ENST00000545889 ID4P47928 161 aa7.88□□□□□ -1.15
CLIP1-218ENST00000545889 REEP5Q00765 189 aa7.88□□□□□ -1.15
CLIP1-218ENST00000545889 VRK2Q86Y07 508 aa7.88□□□□□ -1.15
CLIP1-218ENST00000545889 SFTPA2Q8IWL1 248 aa7.88□□□□□ -1.15
CLIP1-218ENST00000545889 C12orf45Q8N5I9 185 aaPredicted RBP7.88□□□□□ -1.15
CLIP1-218ENST00000545889 ZNF675Q8TD23 568 aa7.88□□□□□ -1.15
CLIP1-218ENST00000545889 KISS1RQ969F8 398 aaPredicted RBP7.88□□□□□ -1.15
CLIP1-218ENST00000545889 RBM14Q96PK6 669 aaKnown RBP7.88□□□□□ -1.15
CLIP1-218ENST00000545889 LRRC61Q9BV99 259 aa7.88□□□□□ -1.15
CLIP1-218ENST00000545889 OPA3Q9H6K4 179 aa7.88□□□□□ -1.15
CLIP1-218ENST00000545889 TAS2R3Q9NYW6 316 aa7.88□□□□□ -1.15
CLIP1-218ENST00000545889 TESQ9UGI8 421 aaKnown RBP7.88□□□□□ -1.15
CLIP1-218ENST00000545889 STEAP1Q9UHE8 339 aa7.88□□□□□ -1.15
CLIP1-218ENST00000545889 SLC17A4Q9Y2C5 497 aa7.88□□□□□ -1.15
CLIP1-218ENST00000545889 PLXNA4Q9HCM2 1894 aa7.88□□□□□ -1.15
CLIP1-218ENST00000545889 FXYD6-FXYD2A0A087WZ82 144 aa7.88□□□□□ -1.15
CLIP1-218ENST00000545889 SLC22A20A6NK97 555 aa7.88□□□□□ -1.15
CLIP1-218ENST00000545889 PRAMEF4O60810 478 aa7.88□□□□□ -1.15
CLIP1-218ENST00000545889 GRPP07492 148 aa7.88□□□□□ -1.15
CLIP1-218ENST00000545889 TIAL1Q01085 375 aaKnown RBP eCLIP7.88□□□□□ -1.15
CLIP1-218ENST00000545889 NTRK2Q16620 822 aa7.88□□□□□ -1.15
CLIP1-218ENST00000545889 ZNF791Q3KP31 576 aaPredicted RBP7.88□□□□□ -1.15
CLIP1-218ENST00000545889 OR2A2Q6IF42 318 aa7.88□□□□□ -1.15
CLIP1-218ENST00000545889 SPRED1Q7Z699 444 aa7.88□□□□□ -1.15
CLIP1-218ENST00000545889 BCORP1Q8N888 145 aa7.88□□□□□ -1.15
CLIP1-218ENST00000545889 BHLHE23Q8NDY6 225 aa7.88□□□□□ -1.15
CLIP1-218ENST00000545889 HAVCR2Q8TDQ0 301 aa7.88□□□□□ -1.15
CLIP1-218ENST00000545889 ADAMTS14Q8WXS8 1223 aa7.88□□□□□ -1.15
CLIP1-218ENST00000545889 PHB2Q99623 299 aa7.88□□□□□ -1.15
CLIP1-218ENST00000545889 FXYD6Q9H0Q3 95 aa7.88□□□□□ -1.15
CLIP1-218ENST00000545889 SYT4Q9H2B2 425 aa7.88□□□□□ -1.15
CLIP1-218ENST00000545889 ACOT13Q9NPJ3 140 aa7.88□□□□□ -1.15
CLIP1-218ENST00000545889 UFSP2Q9NUQ7 469 aa7.88□□□□□ -1.15
CLIP1-218ENST00000545889 SLC5A6Q9Y289 635 aa7.88□□□□□ -1.15
CLIP1-218ENST00000545889 PTPRDP23468 1912 aa7.88□□□□□ -1.15
CLIP1-218ENST00000545889 NLRC5Q86WI3 1866 aa7.88□□□□□ -1.15
CLIP1-218ENST00000545889 TRGV5A0A0B4J1U4 118 aa7.88□□□□□ -1.15
CLIP1-218ENST00000545889 A8MVM7 634 aa7.88□□□□□ -1.15
CLIP1-218ENST00000545889 RPL11P62913 178 aaKnown RBP7.88□□□□□ -1.15
CLIP1-218ENST00000545889 EXOSC2Q13868 293 aaKnown RBP7.88□□□□□ -1.15
CLIP1-218ENST00000545889 IL11RAQ14626 422 aa7.88□□□□□ -1.15
CLIP1-218ENST00000545889 LTB4RQ15722 352 aa7.88□□□□□ -1.15
CLIP1-218ENST00000545889 ANKRD34AQ69YU3 496 aa7.88□□□□□ -1.15
CLIP1-218ENST00000545889 LINC00299Q6ZSB3 139 aa7.88□□□□□ -1.15
CLIP1-218ENST00000545889 SLC35D2Q76EJ3 337 aa7.88□□□□□ -1.15
CLIP1-218ENST00000545889 DPPA2Q7Z7J5 298 aa7.88□□□□□ -1.15
CLIP1-218ENST00000545889 GLCCI1Q86VQ1 547 aa7.88□□□□□ -1.15
CLIP1-218ENST00000545889 Q8N402 240 aa7.88□□□□□ -1.15
CLIP1-218ENST00000545889 CCDC71LQ8N9Z2 235 aa7.88□□□□□ -1.15
CLIP1-218ENST00000545889 TMEM185AQ8NFB2 350 aa7.88□□□□□ -1.15
CLIP1-218ENST00000545889 B3GNT7Q8NFL0 401 aa7.88□□□□□ -1.15
CLIP1-218ENST00000545889 TGIF2Q9GZN2 237 aa7.88□□□□□ -1.15
CLIP1-218ENST00000545889 ZNF443Q9Y2A4 671 aaPredicted RBP7.88□□□□□ -1.15
CLIP1-218ENST00000545889 CMAHPQ9Y471 501 aa7.88□□□□□ -1.15
CLIP1-218ENST00000545889 ASB4Q9Y574 426 aa7.88□□□□□ -1.15
CLIP1-218ENST00000545889 PCDHGA1Q9Y5H4 931 aa7.88□□□□□ -1.15
CLIP1-218ENST00000545889 TRAV27A0A087WT01 109 aa7.87□□□□□ -1.15
CLIP1-218ENST00000545889 BORCS7-ASMTA0A0B4J1R7 106 aa7.87□□□□□ -1.15
CLIP1-218ENST00000545889 PRAMEF27A3QJZ7 478 aa7.87□□□□□ -1.15
CLIP1-218ENST00000545889 SPINT1O43278 529 aa7.87□□□□□ -1.15
CLIP1-218ENST00000545889 HPGDSO60760 199 aa7.87□□□□□ -1.15
CLIP1-218ENST00000545889 CAPNS1P04632 268 aa7.87□□□□□ -1.15
CLIP1-218ENST00000545889 PET100P0DJ07 73 aa7.87□□□□□ -1.15
CLIP1-218ENST00000545889 NFYBP25208 207 aa7.87□□□□□ -1.15
CLIP1-218ENST00000545889 TRHRP34981 398 aaPredicted RBP7.87□□□□□ -1.15
CLIP1-218ENST00000545889 PTGER4P35408 488 aa7.87□□□□□ -1.15
CLIP1-218ENST00000545889 TSC2P49815 1807 aa7.87□□□□□ -1.15
CLIP1-218ENST00000545889 EDDM3AQ14507 147 aa7.87□□□□□ -1.15
CLIP1-218ENST00000545889 SPHARQ15513 63 aa7.87□□□□□ -1.15
CLIP1-218ENST00000545889 CTU2Q2VPK5 515 aaKnown RBP7.87□□□□□ -1.15
CLIP1-218ENST00000545889 ZNF766Q5HY98 468 aa7.87□□□□□ -1.15
CLIP1-218ENST00000545889 METTL11BQ5VVY1 283 aa7.87□□□□□ -1.15
CLIP1-218ENST00000545889 TEX261Q6UWH6 196 aa7.87□□□□□ -1.15
CLIP1-218ENST00000545889 KANSL1Q7Z3B3 1105 aa7.87□□□□□ -1.15
CLIP1-218ENST00000545889 NLRP8Q86W28 1048 aa7.87□□□□□ -1.15
CLIP1-218ENST00000545889 GLB1L2Q8IW92 636 aa7.87□□□□□ -1.15
CLIP1-218ENST00000545889 SLC35F2Q8IXU6 374 aa7.87□□□□□ -1.15
CLIP1-218ENST00000545889 MAML2Q8IZL2 1156 aaPredicted RBP7.87□□□□□ -1.15
CLIP1-218ENST00000545889 IQCF1Q8N6M8 205 aa7.87□□□□□ -1.15
CLIP1-218ENST00000545889 ZFP41Q8N8Y5 198 aa7.87□□□□□ -1.15
CLIP1-218ENST00000545889 TSLPQ969D9 159 aa7.87□□□□□ -1.15
CLIP1-218ENST00000545889 INTS12Q96CB8 462 aaKnown RBP7.87□□□□□ -1.15
CLIP1-218ENST00000545889 ZNF350Q9GZX5 532 aa7.87□□□□□ -1.15
CLIP1-218ENST00000545889 USP22Q9UPT9 525 aa7.87□□□□□ -1.15
CLIP1-218ENST00000545889 ATG4BQ9Y4P1 393 aa7.87□□□□□ -1.15
CLIP1-218ENST00000545889 U3KQ87 197 aa7.87□□□□□ -1.15
CLIP1-218ENST00000545889 TRAV36DV7A0A075B6V5 113 aa7.87□□□□□ -1.15
CLIP1-218ENST00000545889 OR6C65A6NJZ3 312 aa7.87□□□□□ -1.15
CLIP1-218ENST00000545889 H0YIV9 168 aa7.87□□□□□ -1.15
CLIP1-218ENST00000545889 BET1O15155 118 aa7.87□□□□□ -1.15
CLIP1-218ENST00000545889 PAPLNO95428 1278 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms