RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 PRRT4C9JH25 899 aa11.48□□□□□ -0.57
COL4A6-209ENST00000545689 AIPO00170 330 aa11.48□□□□□ -0.57
COL4A6-209ENST00000545689 ITGBL1O95965 494 aaPredicted RBP11.48□□□□□ -0.57
COL4A6-209ENST00000545689 RPS18P62269 152 aaKnown RBP11.48□□□□□ -0.57
COL4A6-209ENST00000545689 EDAQ92838 391 aa11.48□□□□□ -0.57
COL4A6-209ENST00000545689 TAAR8Q969N4 342 aa11.48□□□□□ -0.57
COL4A6-209ENST00000545689 MYEOVQ96EZ4 313 aa11.48□□□□□ -0.57
COL4A6-209ENST00000545689 SMIM3Q9BZL3 60 aa11.48□□□□□ -0.57
COL4A6-209ENST00000545689 HRH4Q9H3N8 390 aa11.48□□□□□ -0.57
COL4A6-209ENST00000545689 OBP2BQ9NPH6 170 aa11.48□□□□□ -0.57
COL4A6-209ENST00000545689 ATP13A2Q9NQ11 1180 aa11.48□□□□□ -0.57
COL4A6-209ENST00000545689 KCNG2Q9UJ96 466 aa11.48□□□□□ -0.57
COL4A6-209ENST00000545689 PCDHGA1Q9Y5H4 931 aa11.48□□□□□ -0.57
COL4A6-209ENST00000545689 MYO18AQ92614 2054 aaKnown RBP11.48□□□□□ -0.57
COL4A6-209ENST00000545689 CSNK1EP49674 416 aaKnown RBP11.48□□□□□ -0.57
COL4A6-209ENST00000545689 HBG1P69891 147 aa11.48□□□□□ -0.57
COL4A6-209ENST00000545689 HBG2P69892 147 aa11.48□□□□□ -0.57
COL4A6-209ENST00000545689 SSBP1Q04837 148 aaKnown RBP11.48□□□□□ -0.57
COL4A6-209ENST00000545689 SLC22A25Q6T423 547 aa11.48□□□□□ -0.57
COL4A6-209ENST00000545689 KDM8Q8N371 416 aa11.48□□□□□ -0.57
COL4A6-209ENST00000545689 OR10K1Q8NGX5 313 aa11.48□□□□□ -0.57
COL4A6-209ENST00000545689 ST8SIA1Q92185 356 aa11.48□□□□□ -0.57
COL4A6-209ENST00000545689 A0A0A6YYD5 115 aa11.48□□□□□ -0.57
COL4A6-209ENST00000545689 AGPAT2O15120 278 aa11.48□□□□□ -0.57
COL4A6-209ENST00000545689 MSR1P21757 451 aa11.48□□□□□ -0.57
COL4A6-209ENST00000545689 IGFBP6P24592 240 aaPredicted RBP11.48□□□□□ -0.57
COL4A6-209ENST00000545689 CCR6P51684 374 aa11.48□□□□□ -0.57
COL4A6-209ENST00000545689 GPR85P60893 370 aa11.48□□□□□ -0.57
COL4A6-209ENST00000545689 ACOXLQ9NUZ1 547 aa11.48□□□□□ -0.57
COL4A6-209ENST00000545689 DHCR7Q9UBM7 475 aaKnown RBP11.48□□□□□ -0.57
COL4A6-209ENST00000545689 GHRLQ9UBU3 117 aa11.48□□□□□ -0.57
COL4A6-209ENST00000545689 IGLV3-16A0A075B6K0 115 aa11.48□□□□□ -0.57
COL4A6-209ENST00000545689 A0A1W2PPV4 95 aa11.48□□□□□ -0.57
COL4A6-209ENST00000545689 CEBPZOSA8MTT3 80 aa11.48□□□□□ -0.57
COL4A6-209ENST00000545689 IMPA2O14732 288 aa11.48□□□□□ -0.57
COL4A6-209ENST00000545689 FGF17O60258 216 aa11.48□□□□□ -0.57
COL4A6-209ENST00000545689 OPN1LWP04000 364 aa11.48□□□□□ -0.57
COL4A6-209ENST00000545689 ZNF266Q14584 549 aa11.48□□□□□ -0.57
COL4A6-209ENST00000545689 KCNIP4Q6PIL6 250 aa11.48□□□□□ -0.57
COL4A6-209ENST00000545689 ALKAL2Q6UX46 152 aa11.48□□□□□ -0.57
COL4A6-209ENST00000545689 NUDT8Q8WV74 236 aa11.48□□□□□ -0.57
COL4A6-209ENST00000545689 HAS2Q92819 552 aa11.48□□□□□ -0.57
COL4A6-209ENST00000545689 FER1L6-AS2Q96M78 137 aa11.48□□□□□ -0.57
COL4A6-209ENST00000545689 PRR14Q9BWN1 585 aa11.48□□□□□ -0.57
COL4A6-209ENST00000545689 C19orf12Q9NSK7 152 aa11.48□□□□□ -0.57
COL4A6-209ENST00000545689 B3GAT1Q9P2W7 334 aa11.48□□□□□ -0.57
COL4A6-209ENST00000545689 TBX21Q9UL17 535 aa11.48□□□□□ -0.57
COL4A6-209ENST00000545689 ZNF587BE7ETH6 402 aa11.48□□□□□ -0.57
COL4A6-209ENST00000545689 CYB5BO43169 146 aa11.48□□□□□ -0.57
COL4A6-209ENST00000545689 OR7C1O76099 320 aaPredicted RBP11.48□□□□□ -0.57
COL4A6-209ENST00000545689 S100A7P31151 101 aa11.48□□□□□ -0.57
COL4A6-209ENST00000545689 ZNF136P52737 540 aa11.48□□□□□ -0.57
COL4A6-209ENST00000545689 PARM1Q6UWI2 310 aa11.48□□□□□ -0.57
COL4A6-209ENST00000545689 TMEM179BQ7Z7N9 219 aa11.48□□□□□ -0.57
COL4A6-209ENST00000545689 ESX1Q8N693 406 aa11.48□□□□□ -0.57
COL4A6-209ENST00000545689 IL1F10Q8WWZ1 152 aa11.48□□□□□ -0.57
COL4A6-209ENST00000545689 SLC22A11Q9NSA0 550 aa11.48□□□□□ -0.57
COL4A6-209ENST00000545689 CHRNA9Q9UGM1 479 aa11.48□□□□□ -0.57
COL4A6-209ENST00000545689 FBXL2Q9UKC9 423 aa11.48□□□□□ -0.57
COL4A6-209ENST00000545689 ARL3P36405 182 aa11.47□□□□□ -0.57
COL4A6-209ENST00000545689 COL9A2Q14055 689 aaPredicted RBP11.47□□□□□ -0.57
COL4A6-209ENST00000545689 BPHLQ86WA6 291 aaPredicted RBP11.47□□□□□ -0.57
COL4A6-209ENST00000545689 KMT5CQ86Y97 462 aa11.47□□□□□ -0.57
COL4A6-209ENST00000545689 S1PR5Q9H228 398 aa11.47□□□□□ -0.57
COL4A6-209ENST00000545689 CD1EP15812 388 aa11.47□□□□□ -0.57
COL4A6-209ENST00000545689 CD79BP40259 229 aa11.47□□□□□ -0.57
COL4A6-209ENST00000545689 IKZF1Q13422 519 aa11.47□□□□□ -0.57
COL4A6-209ENST00000545689 RBMS3Q6XE24 437 aaKnown RBP11.47□□□□□ -0.57
COL4A6-209ENST00000545689 LINC00346Q8IVM7 164 aa11.47□□□□□ -0.57
COL4A6-209ENST00000545689 CPNE4Q96A23 557 aaPredicted RBP11.47□□□□□ -0.57
COL4A6-209ENST00000545689 SMIM19Q96E16 107 aa11.47□□□□□ -0.57
COL4A6-209ENST00000545689 CMTM3Q96MX0 182 aa11.47□□□□□ -0.57
COL4A6-209ENST00000545689 KCNJ15Q99712 375 aa11.47□□□□□ -0.57
COL4A6-209ENST00000545689 ARHGDIGQ99819 225 aa11.47□□□□□ -0.57
COL4A6-209ENST00000545689 GLYR1Q49A26 553 aaPredicted RBP11.47□□□□□ -0.57
COL4A6-209ENST00000545689 TMEM240Q5SV17 173 aa11.47□□□□□ -0.57
COL4A6-209ENST00000545689 GLIPR1L1Q6UWM5 242 aa11.47□□□□□ -0.57
COL4A6-209ENST00000545689 PISDQ9UG56 409 aa11.47□□□□□ -0.57
COL4A6-209ENST00000545689 STK17BO94768 372 aa11.47□□□□□ -0.57
COL4A6-209ENST00000545689 CNR1P21554 472 aa11.47□□□□□ -0.57
COL4A6-209ENST00000545689 AADACL3Q5VUY0 350 aa11.47□□□□□ -0.57
COL4A6-209ENST00000545689 LIPNQ5VXI9 398 aa11.47□□□□□ -0.57
COL4A6-209ENST00000545689 TMUB2Q71RG4 321 aa11.47□□□□□ -0.57
COL4A6-209ENST00000545689 RDH10Q8IZV5 341 aa11.47□□□□□ -0.57
COL4A6-209ENST00000545689 RBPMSQ93062 196 aaKnown RBP11.47□□□□□ -0.57
COL4A6-209ENST00000545689 SLC35B4Q969S0 331 aa11.47□□□□□ -0.57
COL4A6-209ENST00000545689 ABHD6Q9BV23 337 aa11.47□□□□□ -0.57
COL4A6-209ENST00000545689 COA3Q9Y2R0 106 aaPredicted RBP11.47□□□□□ -0.57
COL4A6-209ENST00000545689 SIT1Q9Y3P8 196 aa11.47□□□□□ -0.57
COL4A6-209ENST00000545689 TBPP20226 339 aa11.47□□□□□ -0.57
COL4A6-209ENST00000545689 NKAIN2Q5VXU1 208 aa11.47□□□□□ -0.57
COL4A6-209ENST00000545689 OLIG3Q7RTU3 272 aa11.47□□□□□ -0.57
COL4A6-209ENST00000545689 ZNF610Q8N9Z0 462 aa11.47□□□□□ -0.57
COL4A6-209ENST00000545689 SSX3Q99909 188 aa11.47□□□□□ -0.57
COL4A6-209ENST00000545689 POFUT1Q9H488 388 aa11.47□□□□□ -0.57
COL4A6-209ENST00000545689 SLC17A4Q9Y2C5 497 aa11.47□□□□□ -0.57
COL4A6-209ENST00000545689 COL24A1Q17RW2 1714 aa11.47□□□□□ -0.57
COL4A6-209ENST00000545689 HIST1H1CP16403 213 aaKnown RBP11.46□□□□□ -0.57
COL4A6-209ENST00000545689 C12orf73Q69YU5 71 aa11.46□□□□□ -0.57
COL4A6-209ENST00000545689 LGI3Q8N145 548 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms