RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 KIRREL2Q6UWL6 708 aa5.28□□□□□ -1.56
VPS50-220ENST00000544910 FRMD1Q8N878 549 aa5.28□□□□□ -1.56
VPS50-220ENST00000544910 OR4N2Q8NGD1 307 aa5.28□□□□□ -1.56
VPS50-220ENST00000544910 Q96M85 177 aa5.28□□□□□ -1.56
VPS50-220ENST00000544910 OR5B2Q96R09 309 aa5.28□□□□□ -1.56
VPS50-220ENST00000544910 LRRC61Q9BV99 259 aa5.28□□□□□ -1.56
VPS50-220ENST00000544910 SLC5A7Q9GZV3 580 aa5.28□□□□□ -1.56
VPS50-220ENST00000544910 METTL17Q9H7H0 456 aaPredicted RBP5.28□□□□□ -1.56
VPS50-220ENST00000544910 APMAPQ9HDC9 416 aa5.28□□□□□ -1.56
VPS50-220ENST00000544910 HRH3Q9Y5N1 445 aa5.28□□□□□ -1.56
VPS50-220ENST00000544910 LOC100289279A0A1B0GTE1 492 aa5.28□□□□□ -1.56
VPS50-220ENST00000544910 HSPB2A8KAH6 182 aa5.28□□□□□ -1.56
VPS50-220ENST00000544910 CDC42EP2O14613 210 aa5.28□□□□□ -1.56
VPS50-220ENST00000544910 TNFSF14O43557 240 aa5.28□□□□□ -1.56
VPS50-220ENST00000544910 AKR1C4P17516 323 aa5.28□□□□□ -1.56
VPS50-220ENST00000544910 HTR2CP28335 458 aa5.28□□□□□ -1.56
VPS50-220ENST00000544910 MMP15P51511 669 aa5.28□□□□□ -1.56
VPS50-220ENST00000544910 P2RX1P51575 399 aa5.28□□□□□ -1.56
VPS50-220ENST00000544910 RPL27P61353 136 aaKnown RBP5.28□□□□□ -1.56
VPS50-220ENST00000544910 MELKQ14680 651 aa5.28□□□□□ -1.56
VPS50-220ENST00000544910 HSPB2Q16082 182 aa5.28□□□□□ -1.56
VPS50-220ENST00000544910 PAN3Q58A45 887 aaKnown RBP5.28□□□□□ -1.56
VPS50-220ENST00000544910 RAET1LQ5VY80 246 aa5.28□□□□□ -1.56
VPS50-220ENST00000544910 SLC35D2Q76EJ3 337 aa5.28□□□□□ -1.56
VPS50-220ENST00000544910 DPY19L4Q7Z388 723 aa5.28□□□□□ -1.56
VPS50-220ENST00000544910 SUMF2Q8NBJ7 301 aa5.28□□□□□ -1.56
VPS50-220ENST00000544910 ST8SIA4Q92187 359 aa5.28□□□□□ -1.56
VPS50-220ENST00000544910 LIN37Q96GY3 246 aaPredicted RBP5.28□□□□□ -1.56
VPS50-220ENST00000544910 SENP5Q96HI0 755 aaPredicted RBP5.28□□□□□ -1.56
VPS50-220ENST00000544910 MIXL1Q9H2W2 232 aa5.28□□□□□ -1.56
VPS50-220ENST00000544910 TCEAL2Q9H3H9 227 aaPredicted RBP5.28□□□□□ -1.56
VPS50-220ENST00000544910 PIGMQ9H3S5 423 aa5.28□□□□□ -1.56
VPS50-220ENST00000544910 GAREM1Q9H706 876 aa5.28□□□□□ -1.56
VPS50-220ENST00000544910 MCCC2Q9HCC0 563 aa5.28□□□□□ -1.56
VPS50-220ENST00000544910 LRFN1Q9P244 771 aa5.28□□□□□ -1.56
VPS50-220ENST00000544910 SPTY2D1-AS1A0A0U1RR47 76 aa5.28□□□□□ -1.56
VPS50-220ENST00000544910 FAM230AA0A1W2PPH8 454 aa5.28□□□□□ -1.56
VPS50-220ENST00000544910 GGT3PA6NGU5 568 aa5.28□□□□□ -1.56
VPS50-220ENST00000544910 HSBP1L1C9JCN9 74 aa5.28□□□□□ -1.56
VPS50-220ENST00000544910 GABRG2P18507 467 aa5.28□□□□□ -1.56
VPS50-220ENST00000544910 SPOCK1Q08629 439 aa5.28□□□□□ -1.56
VPS50-220ENST00000544910 FUT5Q11128 374 aa5.28□□□□□ -1.56
VPS50-220ENST00000544910 KCNAB1Q14722 419 aa5.28□□□□□ -1.56
VPS50-220ENST00000544910 ELAVL1Q15717 326 aaKnown RBP5.28□□□□□ -1.56
VPS50-220ENST00000544910 RNF212Q495C1 297 aa5.28□□□□□ -1.56
VPS50-220ENST00000544910 EEF1A1P5Q5VTE0 462 aa5.28□□□□□ -1.56
VPS50-220ENST00000544910 PRSS41Q7RTY9 318 aa5.28□□□□□ -1.56
VPS50-220ENST00000544910 ZNF546Q86UE3 836 aa5.28□□□□□ -1.56
VPS50-220ENST00000544910 CMTM3Q96MX0 182 aa5.28□□□□□ -1.56
VPS50-220ENST00000544910 PRRT1Q99946 306 aa5.28□□□□□ -1.56
VPS50-220ENST00000544910 ULBP3Q9BZM4 244 aa5.28□□□□□ -1.56
VPS50-220ENST00000544910 FKRPQ9H9S5 495 aa5.28□□□□□ -1.56
VPS50-220ENST00000544910 NIT2Q9NQR4 276 aa5.28□□□□□ -1.56
VPS50-220ENST00000544910 DHCR7Q9UBM7 475 aaKnown RBP5.28□□□□□ -1.56
VPS50-220ENST00000544910 A0A087WUJ7 227 aa5.28□□□□□ -1.56
VPS50-220ENST00000544910 A0A0B4J203 849 aa5.28□□□□□ -1.56
VPS50-220ENST00000544910 TMEM269A0A1B0GVZ9 245 aa5.28□□□□□ -1.56
VPS50-220ENST00000544910 A0A1B0GX78 115 aa5.28□□□□□ -1.56
VPS50-220ENST00000544910 A6NL46 340 aa5.28□□□□□ -1.56
VPS50-220ENST00000544910 ZNF705GA8MUZ8 300 aaPredicted RBP5.28□□□□□ -1.56
VPS50-220ENST00000544910 A8MVM7 634 aa5.28□□□□□ -1.56
VPS50-220ENST00000544910 TMEM127O75204 238 aa5.28□□□□□ -1.56
VPS50-220ENST00000544910 ZNF254O75437 659 aa5.28□□□□□ -1.56
VPS50-220ENST00000544910 GLULP15104 373 aa5.28□□□□□ -1.56
VPS50-220ENST00000544910 ZNF43P17038 809 aa5.28□□□□□ -1.56
VPS50-220ENST00000544910 PPICP45877 212 aa5.28□□□□□ -1.56
VPS50-220ENST00000544910 MECP2P51608 486 aaKnown RBP5.28□□□□□ -1.56
VPS50-220ENST00000544910 RAB4BP61018 213 aa5.28□□□□□ -1.56
VPS50-220ENST00000544910 POU3F1Q03052 451 aaPredicted RBP5.28□□□□□ -1.56
VPS50-220ENST00000544910 FAM53BQ14153 422 aa5.28□□□□□ -1.56
VPS50-220ENST00000544910 SPIN3Q5JUX0 258 aa5.28□□□□□ -1.56
VPS50-220ENST00000544910 C1orf140Q5VVS0 124 aa5.28□□□□□ -1.56
VPS50-220ENST00000544910 CMTM4Q8IZR5 234 aa5.28□□□□□ -1.56
VPS50-220ENST00000544910 STEAP2Q8NFT2 490 aa5.28□□□□□ -1.56
VPS50-220ENST00000544910 OR5D14Q8NGL3 314 aa5.28□□□□□ -1.56
VPS50-220ENST00000544910 OR10K1Q8NGX5 313 aa5.28□□□□□ -1.56
VPS50-220ENST00000544910 POC1BQ8TC44 478 aa5.28□□□□□ -1.56
VPS50-220ENST00000544910 TMEM106AQ96A25 262 aa5.28□□□□□ -1.56
VPS50-220ENST00000544910 OR1F2PQ96R84 312 aa5.28□□□□□ -1.56
VPS50-220ENST00000544910 RPP25Q9BUL9 199 aaKnown RBP5.28□□□□□ -1.56
VPS50-220ENST00000544910 DUSP23Q9BVJ7 150 aa5.28□□□□□ -1.56
VPS50-220ENST00000544910 ZNF346Q9UL40 294 aaKnown RBP5.28□□□□□ -1.56
VPS50-220ENST00000544910 COPS3Q9UNS2 423 aa5.28□□□□□ -1.56
VPS50-220ENST00000544910 FNDC1Q4ZHG4 1894 aaPredicted RBP5.28□□□□□ -1.56
VPS50-220ENST00000544910 A0A1W2PPC4 97 aa5.28□□□□□ -1.56
VPS50-220ENST00000544910 MAGEB4O15481 346 aaPredicted RBP5.28□□□□□ -1.56
VPS50-220ENST00000544910 ADRB1P08588 477 aa5.28□□□□□ -1.56
VPS50-220ENST00000544910 CT62P0C5K7 136 aa5.28□□□□□ -1.56
VPS50-220ENST00000544910 S100A11P31949 105 aa5.28□□□□□ -1.56
VPS50-220ENST00000544910 EMP2P54851 167 aa5.28□□□□□ -1.56
VPS50-220ENST00000544910 RPL18Q07020 188 aaKnown RBP5.28□□□□□ -1.56
VPS50-220ENST00000544910 NKPD1Q17RQ9 610 aa5.28□□□□□ -1.56
VPS50-220ENST00000544910 YOD1Q5VVQ6 348 aaPredicted RBP5.28□□□□□ -1.56
VPS50-220ENST00000544910 TMPRSS9Q7Z410 1059 aa5.28□□□□□ -1.56
VPS50-220ENST00000544910 OR6F1Q8NGZ6 308 aa5.28□□□□□ -1.56
VPS50-220ENST00000544910 PAQR8Q8TEZ7 354 aa5.28□□□□□ -1.56
VPS50-220ENST00000544910 RRNAD1Q96FB5 475 aaKnown RBP5.28□□□□□ -1.56
VPS50-220ENST00000544910 SLC25A44Q96H78 314 aaPredicted RBP5.28□□□□□ -1.56
VPS50-220ENST00000544910 ZNF681Q96N22 645 aa5.28□□□□□ -1.56
VPS50-220ENST00000544910 GPA33Q99795 319 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms